RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 A0A0G2JLL6 359 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-212ENST00000482251 CTNND1O60716 968 aaKnown RBP12.77□□□□□ -0.37
CPSF4-212ENST00000482251 MYCP01106 439 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-212ENST00000482251 PLCG2P16885 1265 aa12.77□□□□□ -0.37
CPSF4-212ENST00000482251 MAP3K10Q02779 954 aa12.77□□□□□ -0.37
CPSF4-212ENST00000482251 RRP1BQ14684 758 aaKnown RBP12.77□□□□□ -0.37
CPSF4-212ENST00000482251 PRRT2Q7Z6L0 340 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-212ENST00000482251 RPAP2Q8IXW5 612 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-212ENST00000482251 CLASRPQ8N2M8 674 aaKnown RBP12.77□□□□□ -0.37
CPSF4-212ENST00000482251 KIF1BPQ96EK5 621 aa12.77□□□□□ -0.37
CPSF4-212ENST00000482251 ZCCHC17Q9NP64 241 aaKnown RBP12.77□□□□□ -0.37
CPSF4-212ENST00000482251 PALD1Q9ULE6 856 aa12.77□□□□□ -0.37
CPSF4-212ENST00000482251 AFG3L2Q9Y4W6 797 aa12.77□□□□□ -0.37
CPSF4-212ENST00000482251 PTCH2Q9Y6C5 1203 aa12.77□□□□□ -0.37
CPSF4-212ENST00000482251 BRCA2P51587 3418 aa12.76□□□□□ -0.37
CPSF4-212ENST00000482251 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
CPSF4-212ENST00000482251 MAP4K4O95819 1239 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-212ENST00000482251 IFIT2P09913 472 aaKnown RBP12.76□□□□□ -0.37
CPSF4-212ENST00000482251 LACTBP83111 547 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-212ENST00000482251 SHROOM1Q2M3G4 852 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-212ENST00000482251 GPAT2Q6NUI2 795 aa12.76□□□□□ -0.37
CPSF4-212ENST00000482251 EDC3Q96F86 508 aaKnown RBP12.76□□□□□ -0.37
CPSF4-212ENST00000482251 PARK7Q99497 189 aaKnown RBP12.76□□□□□ -0.37
CPSF4-212ENST00000482251 DNAJC18Q9H819 358 aa12.76□□□□□ -0.37
CPSF4-212ENST00000482251 ADGRA2Q96PE1 1338 aa12.76□□□□□ -0.37
CPSF4-212ENST00000482251 NAV1Q8NEY1 1877 aa12.76□□□□□ -0.37
CPSF4-212ENST00000482251 LOC285556D6RIA3 1793 aa12.75□□□□□ -0.37
CPSF4-212ENST00000482251 GOLIM4O00461 696 aa12.75□□□□□ -0.37
CPSF4-212ENST00000482251 CXCL11O14625 94 aa12.75□□□□□ -0.37
CPSF4-212ENST00000482251 TBC1D12O60347 775 aa12.75□□□□□ -0.37
CPSF4-212ENST00000482251 GDF11O95390 407 aa12.75□□□□□ -0.37
CPSF4-212ENST00000482251 CTGFP29279 349 aa12.75□□□□□ -0.37
CPSF4-212ENST00000482251 USP5P45974 858 aa12.75□□□□□ -0.37
CPSF4-212ENST00000482251 PPP4CP60510 307 aa12.75□□□□□ -0.37
CPSF4-212ENST00000482251 MAP3K12Q12852 859 aa12.75□□□□□ -0.37
CPSF4-212ENST00000482251 KIF22Q14807 665 aa12.75□□□□□ -0.37
CPSF4-212ENST00000482251 DDX60LQ5H9U9 1706 aaKnown RBP12.75□□□□□ -0.37
CPSF4-212ENST00000482251 CRACR2BQ8N4Y2 399 aaPredicted RBP12.75□□□□□ -0.37
CPSF4-212ENST00000482251 YTHDC1Q96MU7 727 aaKnown RBP12.75□□□□□ -0.37
CPSF4-212ENST00000482251 TRIM34Q9BYJ4 488 aa12.75□□□□□ -0.37
CPSF4-212ENST00000482251 MYH1P12882 1939 aa12.74□□□□□ -0.37
CPSF4-212ENST00000482251 POTEFA5A3E0 1075 aa12.74□□□□□ -0.37
CPSF4-212ENST00000482251 SMARCA5O60264 1052 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-212ENST00000482251 CAP2P40123 477 aa12.74□□□□□ -0.37
CPSF4-212ENST00000482251 SPP2Q13103 211 aa12.74□□□□□ -0.37
CPSF4-212ENST00000482251 PDE3AQ14432 1141 aa12.74□□□□□ -0.37
CPSF4-212ENST00000482251 SLC9C1Q4G0N8 1177 aa12.74□□□□□ -0.37
CPSF4-212ENST00000482251 TREML2Q5T2D2 321 aa12.74□□□□□ -0.37
CPSF4-212ENST00000482251 C17orf99Q6UX52 265 aa12.74□□□□□ -0.37
CPSF4-212ENST00000482251 DHX36Q9H2U1 1008 aaKnown RBP12.74□□□□□ -0.37
CPSF4-212ENST00000482251 CHMP4BQ9H444 224 aaKnown RBP12.74□□□□□ -0.37
CPSF4-212ENST00000482251 PI4KBQ9UBF8 816 aa12.74□□□□□ -0.37
CPSF4-212ENST00000482251 HERC5Q9UII4 1024 aaKnown RBP12.74□□□□□ -0.37
CPSF4-212ENST00000482251 TNRC18O15417 2968 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-212ENST00000482251 PDE4DIPQ5VU43 2346 aa12.73□□□□□ -0.37
CPSF4-212ENST00000482251 RAB11FIP3O75154 756 aa12.73□□□□□ -0.37
CPSF4-212ENST00000482251 HLA-DOAP06340 250 aa12.73□□□□□ -0.37
CPSF4-212ENST00000482251 PSMC4P43686 418 aa12.73□□□□□ -0.37
CPSF4-212ENST00000482251 HMGCS2P54868 508 aa12.73□□□□□ -0.37
CPSF4-212ENST00000482251 JAG1P78504 1218 aa12.73□□□□□ -0.37
CPSF4-212ENST00000482251 SLFNL1Q499Z3 407 aa12.73□□□□□ -0.37
CPSF4-212ENST00000482251 FASTKD5Q7L8L6 764 aaKnown RBP12.73□□□□□ -0.37
CPSF4-212ENST00000482251 SMCR8Q8TEV9 937 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-212ENST00000482251 SH3TC2Q8TF17 1288 aa12.73□□□□□ -0.37
CPSF4-212ENST00000482251 TRIM47Q96LD4 638 aa12.73□□□□□ -0.37
CPSF4-212ENST00000482251 BOLA2Q9H3K6 86 aa12.73□□□□□ -0.37
CPSF4-212ENST00000482251 ZNF532Q9HCE3 1301 aa12.72□□□□□ -0.37
CPSF4-212ENST00000482251 FMNL1O95466 1100 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-212ENST00000482251 PDE6AP16499 860 aa12.72□□□□□ -0.37
CPSF4-212ENST00000482251 MTMR2Q13614 643 aa12.72□□□□□ -0.37
CPSF4-212ENST00000482251 ARHGEF6Q15052 776 aa12.72□□□□□ -0.37
CPSF4-212ENST00000482251 TTF1Q15361 905 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-212ENST00000482251 SLC9C2Q5TAH2 1124 aa12.72□□□□□ -0.37
CPSF4-212ENST00000482251 ZNF280CQ8ND82 737 aa12.72□□□□□ -0.37
CPSF4-212ENST00000482251 ARMC5Q96C12 935 aa12.72□□□□□ -0.37
CPSF4-212ENST00000482251 AGTPBP1Q9UPW5 1226 aa12.72□□□□□ -0.37
CPSF4-212ENST00000482251 MGAMO43451 1857 aa12.72□□□□□ -0.37
CPSF4-212ENST00000482251 RBBP6Q7Z6E9 1792 aaKnown RBP12.71□□□□□ -0.37
CPSF4-212ENST00000482251 MYPNQ86TC9 1320 aa12.71□□□□□ -0.37
CPSF4-212ENST00000482251 MKI67P46013 3256 aaKnown RBP12.71□□□□□ -0.37
CPSF4-212ENST00000482251 MAGEB6P1A0A0J9YX57 407 aa12.71□□□□□ -0.37
CPSF4-212ENST00000482251 USP17L5A8MUK1 530 aa12.71□□□□□ -0.37
CPSF4-212ENST00000482251 CHGBP05060 677 aa12.71□□□□□ -0.37
CPSF4-212ENST00000482251 BCRP11274 1271 aa12.71□□□□□ -0.37
CPSF4-212ENST00000482251 OSBPP22059 807 aa12.71□□□□□ -0.37
CPSF4-212ENST00000482251 EVX2Q03828 476 aa12.71□□□□□ -0.37
CPSF4-212ENST00000482251 ZNF333Q96JL9 665 aa12.71□□□□□ -0.37
CPSF4-212ENST00000482251 RIOK1Q9BRS2 568 aaKnown RBP12.71□□□□□ -0.37
CPSF4-212ENST00000482251 LRRCC1Q9C099 1032 aa12.71□□□□□ -0.37
CPSF4-212ENST00000482251 PAG1Q9NWQ8 432 aa12.71□□□□□ -0.37
CPSF4-212ENST00000482251 ZBTB21Q9ULJ3 1066 aa12.71□□□□□ -0.37
CPSF4-212ENST00000482251 PRKCZQ05513 592 aa12.7□□□□□ -0.38
CPSF4-212ENST00000482251 TSHZ3Q63HK5 1081 aa12.7□□□□□ -0.38
CPSF4-212ENST00000482251 LCORLQ8N3X6 602 aa12.7□□□□□ -0.38
CPSF4-212ENST00000482251 ANKRD13CQ8N6S4 541 aa12.7□□□□□ -0.38
CPSF4-212ENST00000482251 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.7□□□□□ -0.38
CPSF4-212ENST00000482251 SDR42E1Q8WUS8 393 aa12.7□□□□□ -0.38
CPSF4-212ENST00000482251 AS3MTQ9HBK9 375 aa12.7□□□□□ -0.38
CPSF4-212ENST00000482251 SRRDQ9UH36 339 aa12.7□□□□□ -0.38
CPSF4-212ENST00000482251 MYH7P12883 1935 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms