RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 ADAM21Q9UKJ8 722 aa16.36■□□□□ 0.21
CCDC78-211ENST00000481804 LDHAL6AQ6ZMR3 332 aa16.36■□□□□ 0.21
CCDC78-211ENST00000481804 LEKR1Q6ZMV7 388 aa16.36■□□□□ 0.21
CCDC78-211ENST00000481804 MEGF6O75095 1541 aa16.35■□□□□ 0.21
CCDC78-211ENST00000481804 RANBP6O60518 1105 aaKnown RBP16.35■□□□□ 0.21
CCDC78-211ENST00000481804 RHOXF2BP0C7M4 288 aa16.35■□□□□ 0.21
CCDC78-211ENST00000481804 BRD3Q15059 726 aa16.35■□□□□ 0.21
CCDC78-211ENST00000481804 FILIP1LQ4L180 1135 aa16.35■□□□□ 0.21
CCDC78-211ENST00000481804 RHOXF2Q9BQY4 288 aa16.35■□□□□ 0.21
CCDC78-211ENST00000481804 SRGAP1Q7Z6B7 1085 aa16.35■□□□□ 0.21
CCDC78-211ENST00000481804 NUP133Q8WUM0 1156 aa16.35■□□□□ 0.21
CCDC78-211ENST00000481804 NAPBQ9H115 298 aa16.35■□□□□ 0.21
CCDC78-211ENST00000481804 PDE11AQ9HCR9 933 aa16.35■□□□□ 0.21
CCDC78-211ENST00000481804 SIPA1L3O60292 1781 aaPredicted RBP16.35■□□□□ 0.21
CCDC78-211ENST00000481804 EIF3JO75822 258 aaKnown RBP16.34■□□□□ 0.21
CCDC78-211ENST00000481804 MCAMP43121 646 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 CEP112Q8N8E3 955 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 NKX2-3Q8TAU0 364 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 NBPF3Q9H094 633 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 FAM237AA0A1B0GTK4 181 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 TULP2O00295 520 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 ADD2P35612 726 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 HSP90B2PQ58FF3 399 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 C10orf67Q8IYJ2 551 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 ZKSCAN3Q9BRR0 538 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 ZNF532Q9HCE3 1301 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 TEX33O43247 280 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 RILPL1Q5EBL4 403 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 KANK3Q6NY19 840 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 CMTR1Q8N1G2 835 aaKnown RBP16.34■□□□□ 0.21
CCDC78-211ENST00000481804 CCDC102AQ96A19 550 aa16.34■□□□□ 0.21
CCDC78-211ENST00000481804 ZNF18P17022 549 aa16.33■□□□□ 0.21
CCDC78-211ENST00000481804 PLCD1P51178 756 aa16.33■□□□□ 0.21
CCDC78-211ENST00000481804 CTDSPL2Q05D32 466 aa16.33■□□□□ 0.21
CCDC78-211ENST00000481804 RBL2Q08999 1139 aa16.33■□□□□ 0.21
CCDC78-211ENST00000481804 ERICH2A1L162 156 aa16.33■□□□□ 0.2
CCDC78-211ENST00000481804 CTAGE9A4FU28 777 aa16.33■□□□□ 0.2
CCDC78-211ENST00000481804 H3BQF6 201 aa16.33■□□□□ 0.2
CCDC78-211ENST00000481804 GUCY1A2P33402 732 aa16.33■□□□□ 0.2
CCDC78-211ENST00000481804 NR5A1Q13285 461 aa16.33■□□□□ 0.2
CCDC78-211ENST00000481804 SART3Q15020 963 aaKnown RBP16.33■□□□□ 0.2
CCDC78-211ENST00000481804 TTF1Q15361 905 aaPredicted RBP16.33■□□□□ 0.2
CCDC78-211ENST00000481804 HDXQ7Z353 690 aa16.33■□□□□ 0.2
CCDC78-211ENST00000481804 CDC23Q9UJX2 597 aa16.33■□□□□ 0.2
CCDC78-211ENST00000481804 CEP131Q9UPN4 1083 aa16.33■□□□□ 0.2
CCDC78-211ENST00000481804 PCDHB6Q9Y5E3 794 aa16.33■□□□□ 0.2
CCDC78-211ENST00000481804 PTPREP23469 700 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 MORC3Q14149 939 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 RTN1Q16799 776 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 EXOC4Q96A65 974 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 LY9Q9HBG7 655 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 FEZ2Q9UHY8 353 aaPredicted RBP16.32■□□□□ 0.2
CCDC78-211ENST00000481804 ADGRG1Q9Y653 693 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 ARFGEF2Q9Y6D5 1785 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 MMP1P03956 469 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 MDM2Q00987 491 aaPredicted RBP16.32■□□□□ 0.2
CCDC78-211ENST00000481804 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
CCDC78-211ENST00000481804 NTRK3Q16288 839 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 TRIML1Q8N9V2 468 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 CABP5Q9NP86 173 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 SLIT3O75094 1523 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 SYNRGQ9UMZ2 1314 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 PHACTR2O75167 634 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 RAD9BQ6WBX8 426 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 IGDCC4Q8TDY8 1250 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 PANX2Q96RD6 677 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 UBXN6Q9BZV1 441 aa16.32■□□□□ 0.2
CCDC78-211ENST00000481804 FBXO2Q9UK22 296 aaPredicted RBP16.32■□□□□ 0.2
CCDC78-211ENST00000481804 NR1I3Q14994 352 aa16.31■□□□□ 0.2
CCDC78-211ENST00000481804 MUM1L1Q5H9M0 696 aa16.31■□□□□ 0.2
CCDC78-211ENST00000481804 USP49Q70CQ1 688 aa16.31■□□□□ 0.2
CCDC78-211ENST00000481804 TEX13AQ9BXU3 409 aaPredicted RBP16.31■□□□□ 0.2
CCDC78-211ENST00000481804 RASSF4Q9H2L5 321 aa16.31■□□□□ 0.2
CCDC78-211ENST00000481804 PIH1D3Q9NQM4 214 aaKnown RBP16.31■□□□□ 0.2
CCDC78-211ENST00000481804 ZSWIM5Q9P217 1185 aa16.31■□□□□ 0.2
CCDC78-211ENST00000481804 FMNL1O95466 1100 aaPredicted RBP16.31■□□□□ 0.2
CCDC78-211ENST00000481804 PDE6AP16499 860 aa16.31■□□□□ 0.2
CCDC78-211ENST00000481804 GPTP24298 496 aa16.31■□□□□ 0.2
CCDC78-211ENST00000481804 CCT6AP40227 531 aaKnown RBP16.31■□□□□ 0.2
CCDC78-211ENST00000481804 WWC2Q6AWC2 1192 aa16.31■□□□□ 0.2
CCDC78-211ENST00000481804 GOLGA5Q8TBA6 731 aa16.31■□□□□ 0.2
CCDC78-211ENST00000481804 CSRNP2Q9H175 543 aa16.31■□□□□ 0.2
CCDC78-211ENST00000481804 PHRF1Q9P1Y6 1649 aaKnown RBP16.31■□□□□ 0.2
CCDC78-211ENST00000481804 A0A0U1RQJ8 604 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 CASP14P31944 242 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 TDO2P48775 406 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 TOB1P50616 345 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-211ENST00000481804 MFSD6Q6ZSS7 791 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 ATRIPQ8WXE1 791 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 CTAGE15A4D2H0 777 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 CTAGE8P0CG41 777 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 ERCC5P28715 1186 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-211ENST00000481804 CASP1P29466 404 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 WTAPQ15007 396 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 KIF6Q6ZMV9 814 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 CTAGE6Q86UF2 777 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 CTAGE4Q8IX94 777 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 SMYD4Q8IYR2 804 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-211ENST00000481804 NAA15Q9BXJ9 866 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms