RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 CCDC69A6NI79 296 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 DTNBO60941 627 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 DYNLL1P63167 89 aaKnown RBP18.37■□□□□ 0.53
RXRA-202ENST00000481739 CTDSPL2Q05D32 466 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 KIAA2012Q0VF49 1180 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 PPP2R5BQ15173 497 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 NFXL1Q6ZNB6 911 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 ESR2Q92731 530 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 CRNKL1Q9BZJ0 848 aaKnown RBP18.37■□□□□ 0.53
RXRA-202ENST00000481739 SLC12A7Q9Y666 1083 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 SNED1Q8TER0 1413 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 LDHCP07864 332 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 BRAPQ7Z569 592 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 FBXO18Q8NFZ0 1043 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 PSMD1Q99460 953 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 ATP8A2Q9NTI2 1148 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 AATFQ9NY61 560 aaKnown RBP eCLIP18.37■□□□□ 0.534e-6■■■■■ 31.7
RXRA-202ENST00000481739 BCS1LQ9Y276 419 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 STK36Q9NRP7 1315 aa18.37■□□□□ 0.53
RXRA-202ENST00000481739 GOLGB1Q14789 3259 aaKnown RBP18.36■□□□□ 0.53
RXRA-202ENST00000481739 CCDC196A0A1B0GTZ2 297 aa18.36■□□□□ 0.53
RXRA-202ENST00000481739 DIXDC1Q155Q3 683 aa18.36■□□□□ 0.53
RXRA-202ENST00000481739 NOL10Q9BSC4 688 aaKnown RBP18.36■□□□□ 0.53
RXRA-202ENST00000481739 ZNF277Q9NRM2 450 aaPredicted RBP18.36■□□□□ 0.53
RXRA-202ENST00000481739 DDX19AQ9NUU7 478 aaKnown RBP18.36■□□□□ 0.53
RXRA-202ENST00000481739 FGRP09769 529 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 WTAPQ15007 396 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 WASF1Q92558 559 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 KCNQ5Q9NR82 932 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 BRCA1P38398 1863 aaKnown RBP18.35■□□□□ 0.53
RXRA-202ENST00000481739 MYH2Q9UKX2 1941 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 GOLGA8AA7E2F4 631 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 F8W031 263 aaPredicted RBP18.35■□□□□ 0.53
RXRA-202ENST00000481739 SLC3A2P08195 630 aaKnown RBP18.35■□□□□ 0.53
RXRA-202ENST00000481739 FAM173BQ6P4H8 233 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 LARGE2Q8N3Y3 721 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 NLGN2Q8NFZ4 835 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 SDR42E1Q8WUS8 393 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 UBAC1Q9BSL1 405 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 MXD3Q9BW11 206 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 RBSNQ9H1K0 784 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 ARPP21Q9UBL0 812 aaPredicted RBP18.35■□□□□ 0.53
RXRA-202ENST00000481739 RCOR1Q9UKL0 485 aa18.35■□□□□ 0.53
RXRA-202ENST00000481739 SLF2Q8IX21 1173 aa18.34■□□□□ 0.53
RXRA-202ENST00000481739 PPP1R9BQ96SB3 815 aa18.34■□□□□ 0.53
RXRA-202ENST00000481739 TOMM22Q9NS69 142 aa18.34■□□□□ 0.53
RXRA-202ENST00000481739 ADD1P35611 737 aaKnown RBP18.33■□□□□ 0.53
RXRA-202ENST00000481739 SBK1Q52WX2 424 aa18.33■□□□□ 0.53
RXRA-202ENST00000481739 MICU3Q86XE3 530 aa18.33■□□□□ 0.53
RXRA-202ENST00000481739 TFIP11Q9UBB9 837 aaKnown RBP18.33■□□□□ 0.53
RXRA-202ENST00000481739 MROH7-TTC4A0A0A0MT08 1334 aa18.33■□□□□ 0.52
RXRA-202ENST00000481739 MINDY4BA8MYZ0 360 aa18.33■□□□□ 0.52
RXRA-202ENST00000481739 BAG3O95817 575 aa18.33■□□□□ 0.52
RXRA-202ENST00000481739 IFNAR1P17181 557 aa18.33■□□□□ 0.52
RXRA-202ENST00000481739 IARSP41252 1262 aaKnown RBP18.33■□□□□ 0.52
RXRA-202ENST00000481739 CERS5Q8N5B7 392 aa18.33■□□□□ 0.52
RXRA-202ENST00000481739 USP17L3A6NCW0 530 aa18.32■□□□□ 0.52
RXRA-202ENST00000481739 USP17L4A6NCW7 530 aa18.32■□□□□ 0.52
RXRA-202ENST00000481739 ORC4O43929 436 aa18.32■□□□□ 0.52
RXRA-202ENST00000481739 UVSSAQ2YD98 709 aa18.32■□□□□ 0.52
RXRA-202ENST00000481739 RRP12Q5JTH9 1297 aaKnown RBP18.32■□□□□ 0.52
RXRA-202ENST00000481739 STRIP1Q5VSL9 837 aa18.32■□□□□ 0.52
RXRA-202ENST00000481739 USP17L1Q7RTZ2 530 aa18.32■□□□□ 0.52
RXRA-202ENST00000481739 IQCA1Q86XH1 822 aa18.32■□□□□ 0.52
RXRA-202ENST00000481739 NUP62CLQ9H1M0 184 aa18.32■□□□□ 0.52
RXRA-202ENST00000481739 TTF2Q9UNY4 1162 aaKnown RBP18.32■□□□□ 0.52
RXRA-202ENST00000481739 SUGT1Q9Y2Z0 365 aa18.32■□□□□ 0.52
RXRA-202ENST00000481739 TACC3Q9Y6A5 838 aa18.32■□□□□ 0.52
RXRA-202ENST00000481739 MYH15Q9Y2K3 1946 aa18.31■□□□□ 0.52
RXRA-202ENST00000481739 SCN9AQ15858 1988 aa18.31■□□□□ 0.52
RXRA-202ENST00000481739 NTRK3Q16288 839 aa18.31■□□□□ 0.52
RXRA-202ENST00000481739 TAOK3Q9H2K8 898 aa18.31■□□□□ 0.52
RXRA-202ENST00000481739 DCP1AQ9NPI6 582 aaPredicted RBP18.31■□□□□ 0.52
RXRA-202ENST00000481739 RTEL1Q9NZ71 1219 aa18.31■□□□□ 0.52
RXRA-202ENST00000481739 BTDP43251 543 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 TRIM29Q14134 588 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 CTR9Q6PD62 1173 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 TRIM22Q8IYM9 498 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 BICD2Q8TD16 824 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 TRIM44Q96DX7 344 aaPredicted RBP18.3■□□□□ 0.52
RXRA-202ENST00000481739 ALG1Q9BT22 464 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 POLR3EQ9NVU0 708 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 FMNL1O95466 1100 aaPredicted RBP18.3■□□□□ 0.52
RXRA-202ENST00000481739 YEATS4O95619 227 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 CDC27P30260 824 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 SSRP1Q08945 709 aaKnown RBP18.3■□□□□ 0.52
RXRA-202ENST00000481739 RTN1Q16799 776 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 DACT2Q5SW24 774 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 NKX2-3Q8TAU0 364 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 SH3RF3Q8TEJ3 882 aaPredicted RBP18.3■□□□□ 0.52
RXRA-202ENST00000481739 VPS33BQ9H267 617 aa18.3■□□□□ 0.52
RXRA-202ENST00000481739 FAM217BQ9NTX9 383 aaPredicted RBP18.3■□□□□ 0.52
RXRA-202ENST00000481739 YDJCA8MPS7 323 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 CCDC192P0DO97 292 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 CALM1P0DP23 149 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 CALM2P0DP24 149 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 CALM3P0DP25 149 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 USP5P45974 858 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 SCNN1DP51172 638 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 PPP4CP60510 307 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms