RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 DCAF15Q66K64 600 aa27.41■■□□□ 1.98
SHISA4-203ENST00000481699 FOXP4Q8IVH2 680 aaPredicted RBP27.41■■□□□ 1.98
SHISA4-203ENST00000481699 STK11IPQ8N1F8 1099 aa27.41■■□□□ 1.98
SHISA4-203ENST00000481699 ZNF287Q9HBT7 754 aa27.41■■□□□ 1.98
SHISA4-203ENST00000481699 NBPF12Q5TAG4 269 aaPredicted RBP27.4■■□□□ 1.98
SHISA4-203ENST00000481699 COL13A1Q5TAT6 717 aaPredicted RBP27.4■■□□□ 1.98
SHISA4-203ENST00000481699 CREB3L3Q68CJ9 461 aa27.4■■□□□ 1.98
SHISA4-203ENST00000481699 CDCA5Q96FF9 252 aa27.4■■□□□ 1.98
SHISA4-203ENST00000481699 TEPSINQ96N21 525 aa27.4■■□□□ 1.98
SHISA4-203ENST00000481699 EHD4Q9H223 541 aa27.4■■□□□ 1.98
SHISA4-203ENST00000481699 RNF41Q9H4P4 317 aaPredicted RBP27.4■■□□□ 1.98
SHISA4-203ENST00000481699 MYH1P12882 1939 aa27.39■■□□□ 1.98
SHISA4-203ENST00000481699 SLC27A2O14975 620 aa27.39■■□□□ 1.98
SHISA4-203ENST00000481699 CTDSPL2Q05D32 466 aa27.39■■□□□ 1.98
SHISA4-203ENST00000481699 PDE4BQ07343 736 aa27.39■■□□□ 1.98
SHISA4-203ENST00000481699 NECTIN1Q15223 517 aa27.39■■□□□ 1.98
SHISA4-203ENST00000481699 SMC1BQ8NDV3 1235 aa27.39■■□□□ 1.98
SHISA4-203ENST00000481699 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.39■■□□□ 1.98
SHISA4-203ENST00000481699 HERC5Q9UII4 1024 aaKnown RBP27.39■■□□□ 1.98
SHISA4-203ENST00000481699 ANAPC4Q9UJX5 808 aa27.39■■□□□ 1.98
SHISA4-203ENST00000481699 BAZ2AQ9UIF9 1905 aaKnown RBP27.39■■□□□ 1.97
SHISA4-203ENST00000481699 CDAN1Q8IWY9 1227 aa27.38■■□□□ 1.97
SHISA4-203ENST00000481699 MKNK2Q9HBH9 465 aa27.38■■□□□ 1.97
SHISA4-203ENST00000481699 TOMM22Q9NS69 142 aa27.38■■□□□ 1.97
SHISA4-203ENST00000481699 SWAP70Q9UH65 585 aa27.38■■□□□ 1.97
SHISA4-203ENST00000481699 TAOK2Q9UL54 1235 aa27.38■■□□□ 1.97
SHISA4-203ENST00000481699 DDX60LQ5H9U9 1706 aaKnown RBP27.38■■□□□ 1.97
SHISA4-203ENST00000481699 CYP21A2P08686 494 aa27.37■■□□□ 1.97
SHISA4-203ENST00000481699 HSPA4P34932 840 aa27.37■■□□□ 1.97
SHISA4-203ENST00000481699 MFSD6Q6ZSS7 791 aa27.37■■□□□ 1.97
SHISA4-203ENST00000481699 RBM46Q8TBY0 533 aaKnown RBP27.37■■□□□ 1.97
SHISA4-203ENST00000481699 DYNLL2Q96FJ2 89 aa27.37■■□□□ 1.97
SHISA4-203ENST00000481699 TRDNQ13061 729 aa27.36■■□□□ 1.97
SHISA4-203ENST00000481699 MIGA2Q7L4E1 593 aa27.36■■□□□ 1.97
SHISA4-203ENST00000481699 KLRG1Q96E93 195 aa27.36■■□□□ 1.97
SHISA4-203ENST00000481699 ZNF408Q9H9D4 720 aa27.36■■□□□ 1.97
SHISA4-203ENST00000481699 ROBO3Q96MS0 1386 aa27.35■■□□□ 1.97
SHISA4-203ENST00000481699 TRAF5O00463 557 aa27.35■■□□□ 1.97
SHISA4-203ENST00000481699 PPP1R12BO60237 982 aaPredicted RBP27.35■■□□□ 1.97
SHISA4-203ENST00000481699 PCP11498 1178 aaKnown RBP27.35■■□□□ 1.97
SHISA4-203ENST00000481699 EVX2Q03828 476 aa27.35■■□□□ 1.97
SHISA4-203ENST00000481699 TTLL12Q14166 644 aaPredicted RBP27.35■■□□□ 1.97
SHISA4-203ENST00000481699 AKNAD1Q5T1N1 836 aa27.35■■□□□ 1.97
SHISA4-203ENST00000481699 DLK2Q6UY11 383 aa27.35■■□□□ 1.97
SHISA4-203ENST00000481699 C16orf86Q6ZW13 317 aa27.35■■□□□ 1.97
SHISA4-203ENST00000481699 TBC1D12O60347 775 aa27.34■■□□□ 1.97
SHISA4-203ENST00000481699 CDK8P49336 464 aa27.34■■□□□ 1.97
SHISA4-203ENST00000481699 KRT32Q14532 448 aa27.34■■□□□ 1.97
SHISA4-203ENST00000481699 RRP12Q5JTH9 1297 aaKnown RBP27.34■■□□□ 1.97
SHISA4-203ENST00000481699 TBC1D10CQ8IV04 446 aa27.34■■□□□ 1.97
SHISA4-203ENST00000481699 STAG1Q8WVM7 1258 aa27.34■■□□□ 1.97
SHISA4-203ENST00000481699 ZNF341Q9BYN7 854 aa27.34■■□□□ 1.97
SHISA4-203ENST00000481699 C22orf23Q9BZE7 217 aa27.34■■□□□ 1.97
SHISA4-203ENST00000481699 CNNM2Q9H8M5 875 aa27.34■■□□□ 1.97
SHISA4-203ENST00000481699 LAMB1P07942 1786 aa27.34■■□□□ 1.97
SHISA4-203ENST00000481699 FAM196BA6NMK8 535 aa27.33■■□□□ 1.97
SHISA4-203ENST00000481699 PRKG1Q13976 671 aa27.33■■□□□ 1.97
SHISA4-203ENST00000481699 RALYLQ86SE5 291 aaKnown RBP27.33■■□□□ 1.97
SHISA4-203ENST00000481699 ZNF444Q8N0Y2 327 aaPredicted RBP27.33■■□□□ 1.97
SHISA4-203ENST00000481699 POLR2AP24928 1970 aaKnown RBP27.33■■□□□ 1.97
SHISA4-203ENST00000481699 SMIM22K7EJ46 135 aa27.32■■□□□ 1.96
SHISA4-203ENST00000481699 GABPAQ06546 454 aa27.32■■□□□ 1.96
SHISA4-203ENST00000481699 METTL16Q86W50 562 aaKnown RBP27.32■■□□□ 1.96
SHISA4-203ENST00000481699 SLC44A5Q8NCS7 719 aa27.32■■□□□ 1.96
SHISA4-203ENST00000481699 KRT23Q9C075 422 aa27.32■■□□□ 1.96
SHISA4-203ENST00000481699 E7EWF7 191 aa27.31■■□□□ 1.96
SHISA4-203ENST00000481699 PRDM1O75626 825 aa27.31■■□□□ 1.96
SHISA4-203ENST00000481699 NBPF3Q9H094 633 aa27.31■■□□□ 1.96
SHISA4-203ENST00000481699 RANBP6O60518 1105 aaKnown RBP27.3■■□□□ 1.96
SHISA4-203ENST00000481699 IREB2P48200 963 aaKnown RBP27.3■■□□□ 1.96
SHISA4-203ENST00000481699 CERKLQ49MI3 558 aaPredicted RBP27.3■■□□□ 1.96
SHISA4-203ENST00000481699 ARMC9Q7Z3E5 817 aa27.3■■□□□ 1.96
SHISA4-203ENST00000481699 SNX14Q9Y5W7 946 aa27.3■■□□□ 1.96
SHISA4-203ENST00000481699 LAMA4Q16363 1823 aa27.3■■□□□ 1.96
SHISA4-203ENST00000481699 ORC4O43929 436 aa27.29■■□□□ 1.96
SHISA4-203ENST00000481699 CELF2O95319 508 aaKnown RBP27.29■■□□□ 1.96
SHISA4-203ENST00000481699 ITGBL1O95965 494 aaPredicted RBP27.29■■□□□ 1.96
SHISA4-203ENST00000481699 SHMT1P34896 483 aa27.29■■□□□ 1.96
SHISA4-203ENST00000481699 ANAPC15P60006 121 aa27.29■■□□□ 1.96
SHISA4-203ENST00000481699 MAP3K10Q02779 954 aa27.29■■□□□ 1.96
SHISA4-203ENST00000481699 FSTL1Q12841 308 aa27.29■■□□□ 1.96
SHISA4-203ENST00000481699 RASEFQ8IZ41 740 aa27.29■■□□□ 1.96
SHISA4-203ENST00000481699 NCOA7Q8NI08 942 aa27.29■■□□□ 1.96
SHISA4-203ENST00000481699 ESR2Q92731 530 aa27.29■■□□□ 1.96
SHISA4-203ENST00000481699 KCNB2Q92953 911 aa27.29■■□□□ 1.96
SHISA4-203ENST00000481699 DNAJC18Q9H819 358 aa27.29■■□□□ 1.96
SHISA4-203ENST00000481699 MPHOSPH10O00566 681 aaKnown RBP27.28■■□□□ 1.96
SHISA4-203ENST00000481699 SLURP2P0DP57 97 aa27.28■■□□□ 1.96
SHISA4-203ENST00000481699 PSMA5P28066 241 aa27.28■■□□□ 1.96
SHISA4-203ENST00000481699 NT5C2P49902 561 aa27.28■■□□□ 1.96
SHISA4-203ENST00000481699 TSGA10IPQ3SY00 556 aa27.28■■□□□ 1.96
SHISA4-203ENST00000481699 C2orf69Q8N8R5 385 aa27.28■■□□□ 1.96
SHISA4-203ENST00000481699 JMYQ8N9B5 988 aa27.28■■□□□ 1.96
SHISA4-203ENST00000481699 CCDC17Q96LX7 622 aa27.28■■□□□ 1.96
SHISA4-203ENST00000481699 WRNIP1Q96S55 665 aa27.28■■□□□ 1.96
SHISA4-203ENST00000481699 INCENPQ9NQS7 918 aa27.28■■□□□ 1.96
SHISA4-203ENST00000481699 ANGEL1Q9UNK9 670 aaKnown RBP27.28■■□□□ 1.96
SHISA4-203ENST00000481699 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.28■■□□□ 1.96
SHISA4-203ENST00000481699 SSC5DA1L4H1 1573 aa27.27■■□□□ 1.96
SHISA4-203ENST00000481699 NEDD4P46934 1319 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms