RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.23□□□□□ -0.61
CLIP4-210ENST00000481628 PNMA3Q9UL41 463 aa11.23□□□□□ -0.61
CLIP4-210ENST00000481628 COLQQ9Y215 455 aaPredicted RBP11.23□□□□□ -0.61
CLIP4-210ENST00000481628 H0YGN5 161 aa11.22□□□□□ -0.61
CLIP4-210ENST00000481628 BCAR3O75815 825 aa11.22□□□□□ -0.61
CLIP4-210ENST00000481628 FLT3LGP49771 235 aa11.22□□□□□ -0.61
CLIP4-210ENST00000481628 PPP4CP60510 307 aa11.22□□□□□ -0.61
CLIP4-210ENST00000481628 G3BP1Q13283 466 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLIP4-210ENST00000481628 TREML2Q5T2D2 321 aa11.22□□□□□ -0.61
CLIP4-210ENST00000481628 TBC1D9Q6ZT07 1266 aa11.22□□□□□ -0.61
CLIP4-210ENST00000481628 CCDC84Q86UT8 332 aaPredicted RBP11.22□□□□□ -0.61
CLIP4-210ENST00000481628 SSH3Q8TE77 659 aa11.22□□□□□ -0.61
CLIP4-210ENST00000481628 SMCR8Q8TEV9 937 aaPredicted RBP11.22□□□□□ -0.61
CLIP4-210ENST00000481628 U2AF1L4Q8WU68 220 aaKnown RBP11.22□□□□□ -0.61
CLIP4-210ENST00000481628 RNF208Q9H0X6 261 aa11.22□□□□□ -0.61
CLIP4-210ENST00000481628 DHX36Q9H2U1 1008 aaKnown RBP11.22□□□□□ -0.61
CLIP4-210ENST00000481628 PRO3102Q9H379 93 aa11.22□□□□□ -0.61
CLIP4-210ENST00000481628 CDK5RAP2Q96SN8 1893 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 FAM196BA6NMK8 535 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 TNPO2O14787 897 aaKnown RBP11.21□□□□□ -0.61
CLIP4-210ENST00000481628 ADCY3O60266 1144 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 ECM2O94769 699 aaPredicted RBP11.21□□□□□ -0.61
CLIP4-210ENST00000481628 PLCG2P16885 1265 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 GCLCP48506 637 aaPredicted RBP11.21□□□□□ -0.61
CLIP4-210ENST00000481628 RRP1BQ14684 758 aaKnown RBP11.21□□□□□ -0.61
CLIP4-210ENST00000481628 TNNI3KQ59H18 835 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 GORABQ5T7V8 394 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 TEX11Q8IYF3 940 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 ZNF280CQ8ND82 737 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 HTATIP2Q9BUP3 242 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 WDR18Q9BV38 432 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 UNC93B1Q9H1C4 597 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 PAK6Q9NQU5 681 aaPredicted RBP11.21□□□□□ -0.61
CLIP4-210ENST00000481628 RAI14Q9P0K7 980 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 NOP58Q9Y2X3 529 aaKnown RBP11.21□□□□□ -0.61
CLIP4-210ENST00000481628 FPGT-TNNI3KV9GXZ4 949 aa11.21□□□□□ -0.61
CLIP4-210ENST00000481628 CEP290O15078 2479 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 USP17L5A8MUK1 530 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 FARP2O94887 1054 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-210ENST00000481628 SGPL1O95470 568 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 INHAP05111 366 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 SPP2Q13103 211 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 PABPC4Q13310 644 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLIP4-210ENST00000481628 ZKSCAN2Q63HK3 967 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 TMEM57Q8N5G2 664 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 ANKRD13CQ8N6S4 541 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 SH3RF3Q8TEJ3 882 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-210ENST00000481628 CRISPLD2Q9H0B8 497 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 DNAJC18Q9H819 358 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 GINM1Q9NU53 330 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 LRP2BPQ9P2M1 347 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 PI4KBQ9UBF8 816 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 MORF4L1Q9UBU8 362 aa11.2□□□□□ -0.62
CLIP4-210ENST00000481628 FLT1P17948 1338 aa11.19□□□□□ -0.62
CLIP4-210ENST00000481628 BAG3O95817 575 aa11.19□□□□□ -0.62
CLIP4-210ENST00000481628 CYP2E1P05181 493 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-210ENST00000481628 ELNP15502 786 aa11.19□□□□□ -0.62
CLIP4-210ENST00000481628 HMGCS2P54868 508 aa11.19□□□□□ -0.62
CLIP4-210ENST00000481628 ATP8B2P98198 1209 aa11.19□□□□□ -0.62
CLIP4-210ENST00000481628 NAA16Q6N069 864 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-210ENST00000481628 ADGRA1Q86SQ6 560 aa11.19□□□□□ -0.62
CLIP4-210ENST00000481628 FRAT1Q92837 279 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-210ENST00000481628 CLUAP1Q96AJ1 413 aa11.19□□□□□ -0.62
CLIP4-210ENST00000481628 COA7Q96BR5 231 aa11.19□□□□□ -0.62
CLIP4-210ENST00000481628 DBNDD2Q9BQY9 259 aa11.19□□□□□ -0.62
CLIP4-210ENST00000481628 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-210ENST00000481628 AS3MTQ9HBK9 375 aa11.19□□□□□ -0.62
CLIP4-210ENST00000481628 BIN2Q9UBW5 565 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-210ENST00000481628 PLXNB2O15031 1838 aa11.19□□□□□ -0.62
CLIP4-210ENST00000481628 TRIOBPQ9H2D6 2365 aa11.18□□□□□ -0.62
CLIP4-210ENST00000481628 ASNSP08243 561 aa11.18□□□□□ -0.62
CLIP4-210ENST00000481628 HOXA7P31268 230 aaPredicted RBP11.18□□□□□ -0.62
CLIP4-210ENST00000481628 CCDC158Q5M9N0 1113 aa11.18□□□□□ -0.62
CLIP4-210ENST00000481628 TTC39AQ5SRH9 613 aa11.18□□□□□ -0.62
CLIP4-210ENST00000481628 TMED8Q6PL24 325 aaPredicted RBP11.18□□□□□ -0.62
CLIP4-210ENST00000481628 NOL10Q9BSC4 688 aaKnown RBP11.18□□□□□ -0.62
CLIP4-210ENST00000481628 AATFQ9NY61 560 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLIP4-210ENST00000481628 DBNLQ9UJU6 430 aaKnown RBP11.18□□□□□ -0.62
CLIP4-210ENST00000481628 GJD2Q9UKL4 321 aa11.18□□□□□ -0.62
CLIP4-210ENST00000481628 DOCK3Q8IZD9 2030 aa11.18□□□□□ -0.62
CLIP4-210ENST00000481628 DDX60LQ5H9U9 1706 aaKnown RBP11.18□□□□□ -0.62
CLIP4-210ENST00000481628 ZBTB7BO15156 539 aaPredicted RBP11.17□□□□□ -0.62
CLIP4-210ENST00000481628 HMGCRP04035 888 aa11.17□□□□□ -0.62
CLIP4-210ENST00000481628 BACE1P56817 501 aa11.17□□□□□ -0.62
CLIP4-210ENST00000481628 JAG1P78504 1218 aa11.17□□□□□ -0.62
CLIP4-210ENST00000481628 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
CLIP4-210ENST00000481628 CERS3Q8IU89 383 aa11.17□□□□□ -0.62
CLIP4-210ENST00000481628 FOXP4Q8IVH2 680 aaPredicted RBP11.17□□□□□ -0.62
CLIP4-210ENST00000481628 DPF3Q92784 378 aa11.17□□□□□ -0.62
CLIP4-210ENST00000481628 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
CLIP4-210ENST00000481628 MYO5AQ9Y4I1 1855 aaKnown RBP11.17□□□□□ -0.62
CLIP4-210ENST00000481628 ALPK3Q96L96 1907 aa11.16□□□□□ -0.62
CLIP4-210ENST00000481628 A0A1W2PPC1 479 aa11.16□□□□□ -0.62
CLIP4-210ENST00000481628 C19orf81C9J6K1 198 aa11.16□□□□□ -0.62
CLIP4-210ENST00000481628 SURF6O75683 361 aaKnown RBP11.16□□□□□ -0.62
CLIP4-210ENST00000481628 ZAP70P43403 619 aa11.16□□□□□ -0.62
CLIP4-210ENST00000481628 MTMR2Q13614 643 aa11.16□□□□□ -0.62
CLIP4-210ENST00000481628 MAP3K21Q5TCX8 1036 aa11.16□□□□□ -0.62
CLIP4-210ENST00000481628 ANKLE1Q8NAG6 615 aa11.16□□□□□ -0.62
CLIP4-210ENST00000481628 TGFBRAP1Q8WUH2 860 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms