RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 MAP3K11Q16584 847 aa6.18□□□□□ -1.42
CBX3-207ENST00000481300 NT5DC4Q86YG4 428 aa6.18□□□□□ -1.42
CBX3-207ENST00000481300 RELL1Q8IUW5 271 aa6.18□□□□□ -1.42
CBX3-207ENST00000481300 SMYD4Q8IYR2 804 aaPredicted RBP6.18□□□□□ -1.42
CBX3-207ENST00000481300 KCNB2Q92953 911 aa6.18□□□□□ -1.42
CBX3-207ENST00000481300 IGSF5Q9NSI5 407 aa6.18□□□□□ -1.42
CBX3-207ENST00000481300 U3KQE9 123 aa6.18□□□□□ -1.42
CBX3-207ENST00000481300 NEFMP07197 916 aa6.17□□□□□ -1.42
CBX3-207ENST00000481300 HCLS1P14317 486 aaPredicted RBP6.17□□□□□ -1.42
CBX3-207ENST00000481300 ARNTP27540 789 aa6.17□□□□□ -1.42
CBX3-207ENST00000481300 ZNF252P-AS1Q0IIN9 211 aa6.17□□□□□ -1.42
CBX3-207ENST00000481300 TTBK2Q6IQ55 1244 aa6.17□□□□□ -1.42
CBX3-207ENST00000481300 ZNF574Q6ZN55 896 aaPredicted RBP6.17□□□□□ -1.42
CBX3-207ENST00000481300 USP48Q86UV5 1035 aa6.17□□□□□ -1.42
CBX3-207ENST00000481300 BCL7CQ8WUZ0 217 aaPredicted RBP6.17□□□□□ -1.42
CBX3-207ENST00000481300 KRTAP9-9Q9BYP9 154 aa6.17□□□□□ -1.42
CBX3-207ENST00000481300 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
CBX3-207ENST00000481300 CBX8Q9HC52 389 aa6.17□□□□□ -1.42
CBX3-207ENST00000481300 LEFTY1O75610 366 aa6.16□□□□□ -1.42
CBX3-207ENST00000481300 NME2P22392 152 aa6.16□□□□□ -1.42
CBX3-207ENST00000481300 GBP2P32456 591 aaPredicted RBP6.16□□□□□ -1.42
CBX3-207ENST00000481300 LIG3P49916 1009 aa6.16□□□□□ -1.42
CBX3-207ENST00000481300 HNRNPUQ00839 825 aaKnown RBP eCLIP6.16□□□□□ -1.42
CBX3-207ENST00000481300 CYP27C1Q4G0S4 372 aa6.16□□□□□ -1.42
CBX3-207ENST00000481300 ZC3H12AQ5D1E8 599 aaKnown RBP6.16□□□□□ -1.42
CBX3-207ENST00000481300 PCNX4Q63HM2 1172 aa6.16□□□□□ -1.42
CBX3-207ENST00000481300 MAP1SQ66K74 1059 aaPredicted RBP6.16□□□□□ -1.42
CBX3-207ENST00000481300 MPRIPQ6WCQ1 1025 aa6.16□□□□□ -1.42
CBX3-207ENST00000481300 SPRED2Q7Z698 418 aa6.16□□□□□ -1.42
CBX3-207ENST00000481300 METTL16Q86W50 562 aaKnown RBP6.16□□□□□ -1.42
CBX3-207ENST00000481300 FAM181AQ8N9Y4 354 aa6.16□□□□□ -1.42
CBX3-207ENST00000481300 RSRP1Q9BUV0 290 aa6.16□□□□□ -1.42
CBX3-207ENST00000481300 EMILIN2Q9BXX0 1053 aa6.16□□□□□ -1.42
CBX3-207ENST00000481300 KBTBD4Q9NVX7 518 aa6.16□□□□□ -1.42
CBX3-207ENST00000481300 CACNA2D2Q9NY47 1150 aa6.16□□□□□ -1.42
CBX3-207ENST00000481300 F6X3S4 739 aa6.15□□□□□ -1.42
CBX3-207ENST00000481300 RNGTTO60942 597 aaKnown RBP6.15□□□□□ -1.42
CBX3-207ENST00000481300 PAGE1O75459 146 aa6.15□□□□□ -1.42
CBX3-207ENST00000481300 ITGB5P18084 799 aa6.15□□□□□ -1.42
CBX3-207ENST00000481300 LRRC14Q15048 493 aa6.15□□□□□ -1.42
CBX3-207ENST00000481300 ZNF394Q53GI3 561 aa6.15□□□□□ -1.42
CBX3-207ENST00000481300 DIEXFQ68CQ4 756 aaKnown RBP6.15□□□□□ -1.42
CBX3-207ENST00000481300 ERMP1Q7Z2K6 904 aa6.15□□□□□ -1.42
CBX3-207ENST00000481300 PLD6Q8N2A8 252 aaKnown RBP6.15□□□□□ -1.42
CBX3-207ENST00000481300 AGBL5Q8NDL9 886 aa6.15□□□□□ -1.42
CBX3-207ENST00000481300 GPBAR1Q8TDU6 330 aa6.15□□□□□ -1.42
CBX3-207ENST00000481300 ISL2Q96A47 359 aa6.15□□□□□ -1.42
CBX3-207ENST00000481300 CCSER2Q9H7U1 834 aa6.15□□□□□ -1.42
CBX3-207ENST00000481300 SLC5A6Q9Y289 635 aa6.15□□□□□ -1.42
CBX3-207ENST00000481300 MINDY4BA8MYZ0 360 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 RPS26P62854 115 aaKnown RBP6.14□□□□□ -1.43
CBX3-207ENST00000481300 ERVK-24P63145 666 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 BNIP3Q12983 259 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 LLGL2Q6P1M3 1020 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 ZNF654Q8IZM8 581 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 GRIN3AQ8TCU5 1115 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 TMEM74Q96NL1 305 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 DUSP23Q9BVJ7 150 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 TGIF2Q9GZN2 237 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 COPRSQ9NQ92 184 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 PCOLCE2Q9UKZ9 415 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 CYP8B1Q9UNU6 501 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 PCDHGB7Q9Y5F8 929 aa6.14□□□□□ -1.43
CBX3-207ENST00000481300 BMP6P22004 513 aa6.13□□□□□ -1.43
CBX3-207ENST00000481300 NTF4P34130 210 aa6.13□□□□□ -1.43
CBX3-207ENST00000481300 AGMOQ6ZNB7 445 aa6.13□□□□□ -1.43
CBX3-207ENST00000481300 RNF214Q8ND24 703 aa6.13□□□□□ -1.43
CBX3-207ENST00000481300 PHC3Q8NDX5 983 aa6.13□□□□□ -1.43
CBX3-207ENST00000481300 NETO1Q8TDF5 533 aa6.13□□□□□ -1.43
CBX3-207ENST00000481300 DDX41Q9UJV9 622 aaKnown RBP6.13□□□□□ -1.43
CBX3-207ENST00000481300 TLR6Q9Y2C9 796 aa6.13□□□□□ -1.43
CBX3-207ENST00000481300 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.13□□□□□ -1.43
CBX3-207ENST00000481300 RASIP1Q5U651 963 aa6.12□□□□□ -1.43
CBX3-207ENST00000481300 STK11IPQ8N1F8 1099 aa6.12□□□□□ -1.43
CBX3-207ENST00000481300 ACSBG1Q96GR2 724 aa6.12□□□□□ -1.43
CBX3-207ENST00000481300 MIR1-1HGQ9H1L0 117 aa6.12□□□□□ -1.43
CBX3-207ENST00000481300 CD8BP10966 210 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 EIF4A3P38919 411 aaKnown RBP6.11□□□□□ -1.43
CBX3-207ENST00000481300 CD96P40200 585 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 OXCT1P55809 520 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 ZC3H6P61129 1189 aaKnown RBP6.11□□□□□ -1.43
CBX3-207ENST00000481300 LMNB2Q03252 620 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 RAD51AP2Q09MP3 1159 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 CAMK2GQ13555 558 aaPredicted RBP6.11□□□□□ -1.43
CBX3-207ENST00000481300 GNL2Q13823 731 aaKnown RBP6.11□□□□□ -1.43
CBX3-207ENST00000481300 PLCL1Q15111 1095 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 ZNF792Q3KQV3 632 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 SNAP47Q5SQN1 464 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 UBE3DQ7Z6J8 389 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.11□□□□□ -1.43
CBX3-207ENST00000481300 TOP6BLQ8N6T0 577 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 MISP3Q96FF7 219 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 SPON2Q9BUD6 331 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 PLAGL2Q9UPG8 496 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 CSADQ9Y600 493 aa6.11□□□□□ -1.43
CBX3-207ENST00000481300 TRIM37O94972 964 aa6.1□□□□□ -1.43
CBX3-207ENST00000481300 PAPLNO95428 1278 aa6.1□□□□□ -1.43
CBX3-207ENST00000481300 PF4P02776 101 aa6.1□□□□□ -1.43
CBX3-207ENST00000481300 YBX3P16989 372 aaKnown RBP eCLIP6.1□□□□□ -1.43
CBX3-207ENST00000481300 JUNBP17275 347 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms