RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 LAMB1P07942 1786 aa13.86□□□□□ -0.19
RAPGEF1-207ENST00000481260 CYP2D6P10635 497 aa13.85□□□□□ -0.19
RAPGEF1-207ENST00000481260 PTPRAP18433 802 aa13.85□□□□□ -0.19
RAPGEF1-207ENST00000481260 SCYL3Q8IZE3 742 aa13.85□□□□□ -0.19
RAPGEF1-207ENST00000481260 SDR42E1Q8WUS8 393 aa13.85□□□□□ -0.19
RAPGEF1-207ENST00000481260 HOOK2Q96ED9 719 aa13.85□□□□□ -0.19
RAPGEF1-207ENST00000481260 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.85□□□□□ -0.19
RAPGEF1-207ENST00000481260 ZHX2Q9Y6X8 837 aa13.85□□□□□ -0.19
RAPGEF1-207ENST00000481260 SALL3Q9BXA9 1300 aa13.85□□□□□ -0.19
RAPGEF1-207ENST00000481260 MAGEB6P1A0A0J9YX57 407 aa13.84□□□□□ -0.19
RAPGEF1-207ENST00000481260 ADD2P35612 726 aa13.84□□□□□ -0.19
RAPGEF1-207ENST00000481260 GTF2A2P52657 109 aa13.84□□□□□ -0.19
RAPGEF1-207ENST00000481260 PPATQ06203 517 aa13.84□□□□□ -0.19
RAPGEF1-207ENST00000481260 PI4K2BQ8TCG2 481 aa13.84□□□□□ -0.19
RAPGEF1-207ENST00000481260 ABHD8Q96I13 439 aa13.84□□□□□ -0.19
RAPGEF1-207ENST00000481260 KCNH4Q9UQ05 1017 aa13.84□□□□□ -0.19
RAPGEF1-207ENST00000481260 COL2A1P02458 1487 aaPredicted RBP13.84□□□□□ -0.19
RAPGEF1-207ENST00000481260 FOCADQ5VW36 1801 aa13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 CYP2D7A0A087X1C5 515 aa13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 TBC1D12O60347 775 aa13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 ECM2O94769 699 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 MBD4O95243 580 aa13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 GDF11O95390 407 aa13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 PLCG2P16885 1265 aa13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 USP5P45974 858 aa13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 PLCD1P51178 756 aa13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 HDAC1Q13547 482 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 TTF1Q15361 905 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 ANKRD45Q5TZF3 282 aa13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 GPAT2Q6NUI2 795 aa13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 CFHR5Q9BXR6 569 aa13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 PUS7LQ9H0K6 701 aaKnown RBP13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 AFG3L2Q9Y4W6 797 aa13.83□□□□□ -0.2
RAPGEF1-207ENST00000481260 TRIM75PA6NK02 468 aa13.82□□□□□ -0.2
RAPGEF1-207ENST00000481260 CTNND1O60716 968 aaKnown RBP13.82□□□□□ -0.2
RAPGEF1-207ENST00000481260 INHBEP58166 350 aa13.82□□□□□ -0.2
RAPGEF1-207ENST00000481260 SNAPC2Q13487 334 aa13.82□□□□□ -0.2
RAPGEF1-207ENST00000481260 B4GALNT3Q6L9W6 998 aa13.82□□□□□ -0.2
RAPGEF1-207ENST00000481260 METTL16Q86W50 562 aaKnown RBP13.82□□□□□ -0.2
RAPGEF1-207ENST00000481260 PI4KBQ9UBF8 816 aa13.82□□□□□ -0.2
RAPGEF1-207ENST00000481260 PHIPQ8WWQ0 1821 aa13.82□□□□□ -0.2
RAPGEF1-207ENST00000481260 DDX60LQ5H9U9 1706 aaKnown RBP13.81□□□□□ -0.2
RAPGEF1-207ENST00000481260 ZSWIM8A7E2V4 1837 aa13.81□□□□□ -0.2
RAPGEF1-207ENST00000481260 DOCK1Q14185 1865 aa13.81□□□□□ -0.2
RAPGEF1-207ENST00000481260 CETPP11597 493 aa13.81□□□□□ -0.2
RAPGEF1-207ENST00000481260 CAP2P40123 477 aa13.81□□□□□ -0.2
RAPGEF1-207ENST00000481260 TAF1CQ15572 869 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF1-207ENST00000481260 SLC44A5Q8NCS7 719 aa13.81□□□□□ -0.2
RAPGEF1-207ENST00000481260 CD99L2Q8TCZ2 262 aa13.81□□□□□ -0.2
RAPGEF1-207ENST00000481260 LNPKQ9C0E8 428 aa13.81□□□□□ -0.2
RAPGEF1-207ENST00000481260 ARHGAP39Q9C0H5 1083 aa13.81□□□□□ -0.2
RAPGEF1-207ENST00000481260 PICK1Q9NRD5 415 aa13.81□□□□□ -0.2
RAPGEF1-207ENST00000481260 BRCA2P51587 3418 aa13.81□□□□□ -0.2
RAPGEF1-207ENST00000481260 A0A0G2JLL6 359 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-207ENST00000481260 M0R2C6 588 aa13.8□□□□□ -0.2
RAPGEF1-207ENST00000481260 FKTNO75072 461 aa13.8□□□□□ -0.2
RAPGEF1-207ENST00000481260 CYP2C8P10632 490 aa13.8□□□□□ -0.2
RAPGEF1-207ENST00000481260 CTGFP29279 349 aa13.8□□□□□ -0.2
RAPGEF1-207ENST00000481260 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
RAPGEF1-207ENST00000481260 PRRT2Q7Z6L0 340 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-207ENST00000481260 OSBP2Q969R2 916 aa13.8□□□□□ -0.2
RAPGEF1-207ENST00000481260 DYNLL2Q96FJ2 89 aa13.8□□□□□ -0.2
RAPGEF1-207ENST00000481260 SEC62Q99442 399 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-207ENST00000481260 DCP1AQ9NPI6 582 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-207ENST00000481260 PDHXO00330 501 aa13.79□□□□□ -0.2
RAPGEF1-207ENST00000481260 ALDH1A1P00352 501 aa13.79□□□□□ -0.2
RAPGEF1-207ENST00000481260 MX1P20591 662 aa13.79□□□□□ -0.2
RAPGEF1-207ENST00000481260 SHMT1P34896 483 aa13.79□□□□□ -0.2
RAPGEF1-207ENST00000481260 SPP2Q13103 211 aa13.79□□□□□ -0.2
RAPGEF1-207ENST00000481260 GADL1Q6ZQY3 521 aa13.79□□□□□ -0.2
RAPGEF1-207ENST00000481260 CTU1Q7Z7A3 348 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-207ENST00000481260 CRACR2BQ8N4Y2 399 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-207ENST00000481260 KBTBD3Q8NAB2 608 aa13.79□□□□□ -0.2
RAPGEF1-207ENST00000481260 DHX36Q9H2U1 1008 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-207ENST00000481260 CPA4Q9UI42 421 aa13.79□□□□□ -0.2
RAPGEF1-207ENST00000481260 ADGRA2Q96PE1 1338 aa13.79□□□□□ -0.2
RAPGEF1-207ENST00000481260 NAV1Q8NEY1 1877 aa13.78□□□□□ -0.2
RAPGEF1-207ENST00000481260 MYH1P12882 1939 aa13.78□□□□□ -0.2
RAPGEF1-207ENST00000481260 CXCL11O14625 94 aa13.78□□□□□ -0.2
RAPGEF1-207ENST00000481260 PEX10O60683 326 aa13.78□□□□□ -0.2
RAPGEF1-207ENST00000481260 IGSF3O75054 1194 aa13.78□□□□□ -0.2
RAPGEF1-207ENST00000481260 UBE3CQ15386 1083 aa13.78□□□□□ -0.2
RAPGEF1-207ENST00000481260 SMC5Q8IY18 1101 aa13.78□□□□□ -0.2
RAPGEF1-207ENST00000481260 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-207ENST00000481260 MCM9Q9NXL9 1143 aa13.78□□□□□ -0.2
RAPGEF1-207ENST00000481260 HERC5Q9UII4 1024 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-207ENST00000481260 ATAD5Q96QE3 1844 aa13.78□□□□□ -0.2
RAPGEF1-207ENST00000481260 CCDC85CA6NKD9 419 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 GH2P01242 217 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 GUCY1A2P33402 732 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 PDE1AP54750 535 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 HMGCS2P54868 508 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 GABPAQ06546 454 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 NOM1Q5C9Z4 860 aaKnown RBP13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 OTUD7BQ6GQQ9 843 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 TTC41PQ6P2S7 1318 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 ANKRD23Q86SG2 305 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 CLEC10AQ8IUN9 316 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 FOXP4Q8IVH2 680 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 GCC1Q96CN9 775 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms