RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 CHPF2Q9P2E5 772 aa7.24□□□□□ -1.25
LINC02040-201ENST00000481004 SERPINA10Q9UK55 444 aa7.24□□□□□ -1.25
LINC02040-201ENST00000481004 LAS1LQ9Y4W2 734 aaKnown RBP7.24□□□□□ -1.25
LINC02040-201ENST00000481004 USP17L15C9J2P7 530 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 USP17L10C9JJH3 530 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 USP17L13C9JLJ4 530 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 USP17L12C9JPN9 530 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 USP17L11C9JVI0 530 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 USP17L21D6R901 530 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 USP17L18D6R9N7 530 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 USP17L22D6RA61 530 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 USP17L17D6RBQ6 530 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 USP17L19D6RCP7 530 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 USP17L20D6RJB6 530 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 TOMM70O94826 608 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 NPR1P16066 1061 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 RFX1P22670 979 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 MSX1P28360 303 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 LMOD3Q0VAK6 560 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 USP17L24Q0WX57 530 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 AIMP1Q12904 312 aaKnown RBP7.23□□□□□ -1.25
LINC02040-201ENST00000481004 LBRQ14739 615 aaKnown RBP7.23□□□□□ -1.25
LINC02040-201ENST00000481004 EFHC2Q5JST6 749 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 TPTE2Q6XPS3 522 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 TNS4Q8IZW8 715 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 C8orf58Q8NAV2 365 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 IQSEC3Q9UPP2 1182 aaPredicted RBP7.23□□□□□ -1.25
LINC02040-201ENST00000481004 ZNF541Q9H0D2 1346 aa7.23□□□□□ -1.25
LINC02040-201ENST00000481004 GLTPD2A6NH11 291 aa7.22□□□□□ -1.25
LINC02040-201ENST00000481004 SFI1A8K8P3 1242 aa7.22□□□□□ -1.25
LINC02040-201ENST00000481004 HOXA10P31260 410 aaPredicted RBP7.22□□□□□ -1.25
LINC02040-201ENST00000481004 PTK7Q13308 1070 aa7.22□□□□□ -1.25
LINC02040-201ENST00000481004 DBN1Q16643 649 aa7.22□□□□□ -1.25
LINC02040-201ENST00000481004 CRTC2Q53ET0 693 aaPredicted RBP7.22□□□□□ -1.25
LINC02040-201ENST00000481004 DUSP27Q5VZP5 1158 aa7.22□□□□□ -1.25
LINC02040-201ENST00000481004 NPM2Q86SE8 214 aaKnown RBP7.22□□□□□ -1.25
LINC02040-201ENST00000481004 NLRP10Q86W26 655 aa7.22□□□□□ -1.25
LINC02040-201ENST00000481004 SLC9A9Q8IVB4 645 aa7.22□□□□□ -1.25
LINC02040-201ENST00000481004 GPR161Q8N6U8 529 aaKnown RBP7.22□□□□□ -1.25
LINC02040-201ENST00000481004 DNAJC5GQ8N7S2 189 aa7.22□□□□□ -1.25
LINC02040-201ENST00000481004 TSPYL6Q8N831 410 aa7.22□□□□□ -1.25
LINC02040-201ENST00000481004 COL25A1Q9BXS0 654 aaPredicted RBP7.22□□□□□ -1.25
LINC02040-201ENST00000481004 TAOK3Q9H2K8 898 aa7.22□□□□□ -1.25
LINC02040-201ENST00000481004 DDX21Q9NR30 783 aaKnown RBP eCLIP7.22□□□□□ -1.25
LINC02040-201ENST00000481004 ZNF277Q9NRM2 450 aaPredicted RBP7.22□□□□□ -1.25
LINC02040-201ENST00000481004 STK17AQ9UEE5 414 aa7.22□□□□□ -1.25
LINC02040-201ENST00000481004 ELL2O00472 640 aaPredicted RBP7.21□□□□□ -1.26
LINC02040-201ENST00000481004 NPHP1O15259 732 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 DDNO94850 711 aaPredicted RBP7.21□□□□□ -1.26
LINC02040-201ENST00000481004 HCLS1P14317 486 aaPredicted RBP7.21□□□□□ -1.26
LINC02040-201ENST00000481004 EPHA4P54764 986 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 FOXK2Q01167 660 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 DPYDQ12882 1025 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 SLC10A5Q5PT55 438 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 ANKMY2Q8IV38 441 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 TSEN2Q8NCE0 465 aaKnown RBP7.21□□□□□ -1.26
LINC02040-201ENST00000481004 TSR2Q969E8 191 aaKnown RBP7.21□□□□□ -1.26
LINC02040-201ENST00000481004 GTPBP3Q969Y2 492 aaKnown RBP7.21□□□□□ -1.26
LINC02040-201ENST00000481004 CNTNAP3BQ96NU0 1288 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 HINFPQ9BQA5 517 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 CNTNAP3Q9BZ76 1288 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 RUBCNLQ9H714 662 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 PHAXQ9H814 394 aaKnown RBP7.21□□□□□ -1.26
LINC02040-201ENST00000481004 IFT57Q9NWB7 429 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 ZDHHC3Q9NYG2 299 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 ZNF232Q9UNY5 417 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 PHF24Q9UPV7 400 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 SCN4AP35499 1836 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 ABCC4O15439 1325 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 KDM2BQ8NHM5 1336 aa7.21□□□□□ -1.26
LINC02040-201ENST00000481004 SPEF2Q9C093 1822 aa7.2□□□□□ -1.26
LINC02040-201ENST00000481004 SERTM1A2A2V5 107 aa7.2□□□□□ -1.26
LINC02040-201ENST00000481004 HOXB7P09629 217 aa7.2□□□□□ -1.26
LINC02040-201ENST00000481004 PSMA6P60900 246 aaKnown RBP7.2□□□□□ -1.26
LINC02040-201ENST00000481004 FKBP4Q02790 459 aaKnown RBP eCLIP7.2□□□□□ -1.26
LINC02040-201ENST00000481004 TCIRG1Q13488 830 aa7.2□□□□□ -1.26
LINC02040-201ENST00000481004 TEAD4Q15561 434 aa7.2□□□□□ -1.26
LINC02040-201ENST00000481004 CCDC93Q567U6 631 aa7.2□□□□□ -1.26
LINC02040-201ENST00000481004 ARSJQ5FYB0 599 aaPredicted RBP7.2□□□□□ -1.26
LINC02040-201ENST00000481004 ISCA1Q9BUE6 129 aa7.2□□□□□ -1.26
LINC02040-201ENST00000481004 NYXQ9GZU5 481 aa7.2□□□□□ -1.26
LINC02040-201ENST00000481004 CRISPLD1Q9H336 500 aa7.2□□□□□ -1.26
LINC02040-201ENST00000481004 USP3Q9Y6I4 520 aa7.2□□□□□ -1.26
LINC02040-201ENST00000481004 ZNF646O15015 1829 aaPredicted RBP7.2□□□□□ -1.26
LINC02040-201ENST00000481004 TCERG1O14776 1098 aaKnown RBP7.19□□□□□ -1.26
LINC02040-201ENST00000481004 DKK1O94907 266 aa7.19□□□□□ -1.26
LINC02040-201ENST00000481004 NOS2P35228 1153 aa7.19□□□□□ -1.26
LINC02040-201ENST00000481004 IARSP41252 1262 aaKnown RBP7.19□□□□□ -1.26
LINC02040-201ENST00000481004 PARP10Q53GL7 1025 aa7.19□□□□□ -1.26
LINC02040-201ENST00000481004 TBCELQ5QJ74 424 aa7.19□□□□□ -1.26
LINC02040-201ENST00000481004 FIGNL1Q6PIW4 674 aa7.19□□□□□ -1.26
LINC02040-201ENST00000481004 ZNF295-AS1Q8N0V1 137 aa7.19□□□□□ -1.26
LINC02040-201ENST00000481004 PLBD2Q8NHP8 589 aa7.19□□□□□ -1.26
LINC02040-201ENST00000481004 FAM200AQ8TCP9 573 aa7.19□□□□□ -1.26
LINC02040-201ENST00000481004 CRAMP1Q96RY5 1269 aa7.19□□□□□ -1.26
LINC02040-201ENST00000481004 UTP14AQ9BVJ6 771 aaKnown RBP7.19□□□□□ -1.26
LINC02040-201ENST00000481004 TSPAN10Q9H1Z9 355 aaPredicted RBP7.19□□□□□ -1.26
LINC02040-201ENST00000481004 NSFL1CQ9UNZ2 370 aaKnown RBP7.19□□□□□ -1.26
LINC02040-201ENST00000481004 GJA3Q9Y6H8 435 aa7.19□□□□□ -1.26
LINC02040-201ENST00000481004 FAM181BA6NEQ2 426 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms