RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 KIF22Q14807 665 aa11.09□□□□□ -0.63
SRGAP3-206ENST00000480750 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
SRGAP3-206ENST00000480750 MAPKAPK5Q8IW41 473 aa11.09□□□□□ -0.63
SRGAP3-206ENST00000480750 MAGEB6Q8N7X4 407 aa11.09□□□□□ -0.63
SRGAP3-206ENST00000480750 ZCCHC17Q9NP64 241 aaKnown RBP11.09□□□□□ -0.63
SRGAP3-206ENST00000480750 HPS5Q9UPZ3 1129 aa11.09□□□□□ -0.63
SRGAP3-206ENST00000480750 CENPFP49454 3210 aa11.09□□□□□ -0.63
SRGAP3-206ENST00000480750 COL2A1P02458 1487 aaPredicted RBP11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 ATRNL1Q5VV63 1379 aa11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 SIPA1L1O43166 1804 aa11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 CTNND1O60716 968 aaKnown RBP11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 USP5P45974 858 aa11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 CAP1Q01518 475 aa11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 TTF1Q15361 905 aaPredicted RBP11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 GADL1Q6ZQY3 521 aa11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 CRACR2BQ8N4Y2 399 aaPredicted RBP11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 MIGA1Q8NAN2 632 aa11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 TGFBRAP1Q8WUH2 860 aa11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 DNAJC2Q99543 621 aaKnown RBP11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 EFCC1Q9HA90 598 aa11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 ZHX2Q9Y6X8 837 aa11.08□□□□□ -0.64
SRGAP3-206ENST00000480750 ZSWIM8A7E2V4 1837 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 PHF20L1A8MW92 1017 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 PDHXO00330 501 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 TBC1D12O60347 775 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 CHGBP05060 677 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 HLA-DOAP06340 250 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 PTPRAP18433 802 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 SOX10P56693 466 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 PPP4CP60510 307 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 MLLT1Q03111 559 aaPredicted RBP11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 RRP1BQ14684 758 aaKnown RBP11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 OTOP1Q7RTM1 612 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 ANKRD23Q86SG2 305 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 CERS3Q8IU89 383 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 CRBNQ96SW2 442 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 DHX36Q9H2U1 1008 aaKnown RBP11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 PI4KBQ9UBF8 816 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 SAP30BPQ9UHR5 308 aaKnown RBP11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 HERC5Q9UII4 1024 aaKnown RBP11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 KCNH4Q9UQ05 1017 aa11.07□□□□□ -0.64
SRGAP3-206ENST00000480750 BAZ2AQ9UIF9 1905 aaKnown RBP11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 TRIM75PA6NK02 468 aa11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 GOLIM4O00461 696 aa11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 CXCL11O14625 94 aa11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 TLR2O60603 784 aa11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 SHROOM1Q2M3G4 852 aaPredicted RBP11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 TSHZ3Q63HK5 1081 aa11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 FASTKD5Q7L8L6 764 aaKnown RBP11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 PARK7Q99497 189 aaKnown RBP11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 LRRCC1Q9C099 1032 aa11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 BOLA2Q9H3K6 86 aa11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 PCDHB15Q9Y5E8 787 aa11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 FLT1P17948 1338 aa11.06□□□□□ -0.64
SRGAP3-206ENST00000480750 RRP1P56182 461 aaKnown RBP11.05□□□□□ -0.64
SRGAP3-206ENST00000480750 JAG1P78504 1218 aa11.05□□□□□ -0.64
SRGAP3-206ENST00000480750 MAP3K10Q02779 954 aa11.05□□□□□ -0.64
SRGAP3-206ENST00000480750 TMED8Q6PL24 325 aaPredicted RBP11.05□□□□□ -0.64
SRGAP3-206ENST00000480750 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.05□□□□□ -0.64
SRGAP3-206ENST00000480750 AS3MTQ9HBK9 375 aa11.05□□□□□ -0.64
SRGAP3-206ENST00000480750 CPA4Q9UI42 421 aa11.05□□□□□ -0.64
SRGAP3-206ENST00000480750 PALD1Q9ULE6 856 aa11.05□□□□□ -0.64
SRGAP3-206ENST00000480750 PTPN22Q9Y2R2 807 aa11.05□□□□□ -0.64
SRGAP3-206ENST00000480750 KIAA0100Q14667 2235 aaKnown RBP11.05□□□□□ -0.64
SRGAP3-206ENST00000480750 LOC285556D6RIA3 1793 aa11.05□□□□□ -0.64
SRGAP3-206ENST00000480750 HTTP42858 3142 aa11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 PDE4DIPQ5VU43 2346 aa11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 A0A0G2JLL6 359 aaPredicted RBP11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 MAGEB6P1A0A0J9YX57 407 aa11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 TNRC18O15417 2968 aaPredicted RBP11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 EVX2Q03828 476 aa11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 SLC9C2Q5TAH2 1124 aa11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 PRRT2Q7Z6L0 340 aaPredicted RBP11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 FOXP4Q8IVH2 680 aaPredicted RBP11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 GPATCH3Q96I76 525 aa11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 TBC1D2Q9BYX2 928 aa11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 PAG1Q9NWQ8 432 aa11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 AFG3L2Q9Y4W6 797 aa11.04□□□□□ -0.64
SRGAP3-206ENST00000480750 DOCK3Q8IZD9 2030 aa11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 USP17L5A8MUK1 530 aa11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 ASNSP08243 561 aa11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 CAP2P40123 477 aa11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 RGS19P49795 217 aa11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 SPP2Q13103 211 aa11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 ZNF280CQ8ND82 737 aa11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 SMCR8Q8TEV9 937 aaPredicted RBP11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 CRNKL1Q9BZJ0 848 aaKnown RBP11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 ARHGAP39Q9C0H5 1083 aa11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 PNMA3Q9UL41 463 aa11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 RBBP6Q7Z6E9 1792 aaKnown RBP11.03□□□□□ -0.64
SRGAP3-206ENST00000480750 GDF11O95390 407 aa11.02□□□□□ -0.65
SRGAP3-206ENST00000480750 FMNL1O95466 1100 aaPredicted RBP11.02□□□□□ -0.65
SRGAP3-206ENST00000480750 POLR3DP05423 398 aaPredicted RBP11.02□□□□□ -0.65
SRGAP3-206ENST00000480750 CYP2C8P10632 490 aa11.02□□□□□ -0.65
SRGAP3-206ENST00000480750 PDE6AP16499 860 aa11.02□□□□□ -0.65
SRGAP3-206ENST00000480750 ATP5JP18859 108 aa11.02□□□□□ -0.65
SRGAP3-206ENST00000480750 HOXD10P28358 340 aa11.02□□□□□ -0.65
SRGAP3-206ENST00000480750 LACTBP83111 547 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms