RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 AK9Q5TCS8 1911 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 MYH13Q9UKX3 1938 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 SEMA3EO15041 775 aa8.73□□□□□ -1.01
COL17A1-205ENST00000480127 CIAO1O76071 339 aa8.73□□□□□ -1.01
COL17A1-205ENST00000480127 HMGCRP04035 888 aa8.73□□□□□ -1.01
COL17A1-205ENST00000480127 GNAI2P04899 355 aa8.73□□□□□ -1.01
COL17A1-205ENST00000480127 SYN1P17600 705 aa8.73□□□□□ -1.01
COL17A1-205ENST00000480127 MVPQ14764 893 aaKnown RBP8.73□□□□□ -1.01
COL17A1-205ENST00000480127 LRIT3Q3SXY7 679 aa8.73□□□□□ -1.01
COL17A1-205ENST00000480127 DEFB123Q8N688 67 aa8.73□□□□□ -1.01
COL17A1-205ENST00000480127 FAM163AQ96GL9 167 aaPredicted RBP8.73□□□□□ -1.01
COL17A1-205ENST00000480127 FBXO3Q9UK99 471 aa8.73□□□□□ -1.01
COL17A1-205ENST00000480127 STXBP5LQ9Y2K9 1186 aa8.73□□□□□ -1.01
COL17A1-205ENST00000480127 PTPRFP10586 1907 aa8.73□□□□□ -1.01
COL17A1-205ENST00000480127 RPTORQ8N122 1335 aa8.73□□□□□ -1.01
COL17A1-205ENST00000480127 DOCK1Q14185 1865 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 TBC1D12O60347 775 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 ADORA1P30542 326 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 MAGEA10P43363 369 aaPredicted RBP8.72□□□□□ -1.01
COL17A1-205ENST00000480127 RARSP54136 660 aaKnown RBP8.72□□□□□ -1.01
COL17A1-205ENST00000480127 RHBDL3P58872 404 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 SPP2Q13103 211 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 PICALMQ13492 652 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 CCDC102BQ68D86 513 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 PROCA1Q8NCQ7 364 aaPredicted RBP8.72□□□□□ -1.01
COL17A1-205ENST00000480127 MEIS3Q99687 375 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 TRIM34Q9BYJ4 488 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 NBPF3Q9H094 633 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 HMX1Q9NP08 348 aaPredicted RBP8.72□□□□□ -1.01
COL17A1-205ENST00000480127 MTMR10Q9NXD2 777 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 PNMA3Q9UL41 463 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 OGDHLQ9ULD0 1010 aa8.72□□□□□ -1.01
COL17A1-205ENST00000480127 GPR75-ASB3A0A0A6YYF3 556 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 FAM196BA6NMK8 535 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 NPM3O75607 178 aaKnown RBP8.71□□□□□ -1.02
COL17A1-205ENST00000480127 BTDP43251 543 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 GCLCP48506 637 aaPredicted RBP8.71□□□□□ -1.02
COL17A1-205ENST00000480127 GSTO1P78417 241 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 RASGRF1Q13972 1273 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 RRP1BQ14684 758 aaKnown RBP8.71□□□□□ -1.02
COL17A1-205ENST00000480127 MAP3K21Q5TCX8 1036 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 ERICH6Q7L0X2 663 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 ITPRIPQ8IWB1 547 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 TDHQ8IZJ6 230 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 ZNF384Q8TF68 577 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 TRIB2Q92519 343 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 OSBPL5Q9H0X9 879 aaPredicted RBP8.71□□□□□ -1.02
COL17A1-205ENST00000480127 ASCC2Q9H1I8 757 aaPredicted RBP8.71□□□□□ -1.02
COL17A1-205ENST00000480127 C11orf49Q9H6J7 331 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 RAI14Q9P0K7 980 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 LRP2BPQ9P2M1 347 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 MROH7-TTC4A0A0A0MT08 1334 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 PFASO15067 1338 aa8.71□□□□□ -1.02
COL17A1-205ENST00000480127 MYH2Q9UKX2 1941 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 DOCK3Q8IZD9 2030 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 LAMA3Q16787 3333 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 A0A1B0GUL7 405 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 COL6A1P12109 1028 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 CAP2P40123 477 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 HMGCS2P54868 508 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 TIMM10P62072 90 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 MECOMQ03112 1051 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 TFCP2Q12800 502 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 SH3D19Q5HYK7 790 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 TTC39AQ5SRH9 613 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 ZKSCAN2Q63HK3 967 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 DIEXFQ68CQ4 756 aaKnown RBP8.7□□□□□ -1.02
COL17A1-205ENST00000480127 ATF7IPQ6VMQ6 1270 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 ZNF280CQ8ND82 737 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 ARHGAP45Q92619 1136 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.7□□□□□ -1.02
COL17A1-205ENST00000480127 MORF4L1Q9UBU8 362 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 DDX60LQ5H9U9 1706 aaKnown RBP8.7□□□□□ -1.02
COL17A1-205ENST00000480127 PDS5AQ29RF7 1337 aaKnown RBP8.7□□□□□ -1.02
COL17A1-205ENST00000480127 LOC285556D6RIA3 1793 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 COL6A3P12111 3177 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 PLXNB2O15031 1838 aa8.7□□□□□ -1.02
COL17A1-205ENST00000480127 PEX10O60683 326 aa8.69□□□□□ -1.02
COL17A1-205ENST00000480127 LDHCP07864 332 aa8.69□□□□□ -1.02
COL17A1-205ENST00000480127 CYP2B6P20813 491 aa8.69□□□□□ -1.02
COL17A1-205ENST00000480127 PABPC4Q13310 644 aaKnown RBP eCLIP8.69□□□□□ -1.02
COL17A1-205ENST00000480127 CCDC158Q5M9N0 1113 aa8.69□□□□□ -1.02
COL17A1-205ENST00000480127 XAGE2Q96GT9 111 aa8.69□□□□□ -1.02
COL17A1-205ENST00000480127 COL25A1Q9BXS0 654 aaPredicted RBP8.69□□□□□ -1.02
COL17A1-205ENST00000480127 TBC1D2Q9BYX2 928 aa8.69□□□□□ -1.02
COL17A1-205ENST00000480127 UBE2OQ9C0C9 1292 aaKnown RBP8.69□□□□□ -1.02
COL17A1-205ENST00000480127 USP17L5A8MUK1 530 aa8.68□□□□□ -1.02
COL17A1-205ENST00000480127 BCAR3O75815 825 aa8.68□□□□□ -1.02
COL17A1-205ENST00000480127 XRCC5P13010 732 aaKnown RBP8.68□□□□□ -1.02
COL17A1-205ENST00000480127 PRKAR2AP13861 404 aaKnown RBP8.68□□□□□ -1.02
COL17A1-205ENST00000480127 TRIM27P14373 513 aa8.68□□□□□ -1.02
COL17A1-205ENST00000480127 JAG1P78504 1218 aa8.68□□□□□ -1.02
COL17A1-205ENST00000480127 CACNB2Q08289 660 aaPredicted RBP8.68□□□□□ -1.02
COL17A1-205ENST00000480127 LHX8Q68G74 356 aa8.68□□□□□ -1.02
COL17A1-205ENST00000480127 USP6NLQ92738 828 aa8.68□□□□□ -1.02
COL17A1-205ENST00000480127 P2RX7Q99572 595 aaKnown RBP8.68□□□□□ -1.02
COL17A1-205ENST00000480127 TXNRD2Q9NNW7 524 aa8.68□□□□□ -1.02
COL17A1-205ENST00000480127 COPRSQ9NQ92 184 aa8.68□□□□□ -1.02
COL17A1-205ENST00000480127 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.68□□□□□ -1.02
COL17A1-205ENST00000480127 COL2A1P02458 1487 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms