RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 GPC2Q8N158 579 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 ONECUT3O60422 494 aaPredicted RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 BRD1O95696 1058 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 ZNF445P59923 1031 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 PAF1Q8N7H5 531 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 PI4K2BQ8TCG2 481 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 BICD2Q8TD16 824 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 KIF2CQ99661 725 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 AP5M1Q9H0R1 490 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 VPS33BQ9H267 617 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 ZSCAN16Q9H4T2 348 aaPredicted RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 SWAP70Q9UH65 585 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 RTL9Q8NET4 1388 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 UTYO14607 1347 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 TNPO2O14787 897 aaKnown RBP6.84□□□□□ -1.31
CPS1-207ENST00000479988 CCDC192P0DO97 292 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 XRCC6P12956 609 aaKnown RBP eCLIP6.84□□□□□ -1.31
CPS1-207ENST00000479988 AK2P54819 239 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 FOXD4L6Q3SYB3 417 aaPredicted RBP6.84□□□□□ -1.31
CPS1-207ENST00000479988 SASS6Q6UVJ0 657 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 FOXD4L3Q6VB84 417 aaPredicted RBP6.84□□□□□ -1.31
CPS1-207ENST00000479988 MIGA2Q7L4E1 593 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 DRC1Q96MC2 740 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 PRDM10Q9NQV6 1147 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 SERPINB13Q9UIV8 391 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 SUGT1Q9Y2Z0 365 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 ADCY9O60503 1353 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 M0QZ92 97 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 BACH1O14867 736 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 FIBPO43427 364 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 ZEB2O60315 1214 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 PHKA1P46020 1223 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 SSRP1Q08945 709 aaKnown RBP6.84□□□□□ -1.31
CPS1-207ENST00000479988 DEFB115Q30KQ5 88 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 MAP1SQ66K74 1059 aaPredicted RBP6.84□□□□□ -1.31
CPS1-207ENST00000479988 KBTBD3Q8NAB2 608 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 EAF2Q96CJ1 260 aaPredicted RBP6.84□□□□□ -1.31
CPS1-207ENST00000479988 RFX7Q2KHR2 1363 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 ESPNB1AK53 854 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 POLRMTO00411 1230 aaKnown RBP6.84□□□□□ -1.31
CPS1-207ENST00000479988 CAVIN2O95810 425 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 EPS15P42566 896 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 HS1BP3Q53T59 392 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 LRSAM1Q6UWE0 723 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.84□□□□□ -1.31
CPS1-207ENST00000479988 ILDR2Q71H61 639 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 TRMT1LQ7Z2T5 733 aaKnown RBP6.84□□□□□ -1.31
CPS1-207ENST00000479988 LDHDQ86WU2 507 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 C6orf50Q9HD87 102 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 ZBTB12Q9Y330 459 aaPredicted RBP6.84□□□□□ -1.31
CPS1-207ENST00000479988 ZNF532Q9HCE3 1301 aa6.84□□□□□ -1.31
CPS1-207ENST00000479988 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.84□□□□□ -1.32
CPS1-207ENST00000479988 GOLGA6L19H0YKK7 550 aa6.84□□□□□ -1.32
CPS1-207ENST00000479988 PSMD14O00487 310 aa6.84□□□□□ -1.32
CPS1-207ENST00000479988 GJB2P29033 226 aa6.84□□□□□ -1.32
CPS1-207ENST00000479988 NAPAP54920 295 aa6.84□□□□□ -1.32
CPS1-207ENST00000479988 TMED8Q6PL24 325 aaPredicted RBP6.84□□□□□ -1.32
CPS1-207ENST00000479988 ANKRD13AQ8IZ07 590 aa6.84□□□□□ -1.32
CPS1-207ENST00000479988 KIFC2Q96AC6 838 aa6.84□□□□□ -1.32
CPS1-207ENST00000479988 LSG1Q9H089 658 aaKnown RBP6.84□□□□□ -1.32
CPS1-207ENST00000479988 GLT8D2Q9H1C3 349 aa6.84□□□□□ -1.32
CPS1-207ENST00000479988 GPCPD1Q9NPB8 672 aa6.84□□□□□ -1.32
CPS1-207ENST00000479988 HOMER2Q9NSB8 354 aa6.84□□□□□ -1.32
CPS1-207ENST00000479988 LRRC4BQ9NT99 713 aa6.84□□□□□ -1.32
CPS1-207ENST00000479988 SNAPC2Q13487 334 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 SCARF1Q14162 830 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 STK38Q15208 465 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 USP50Q70EL3 339 aaPredicted RBP6.83□□□□□ -1.32
CPS1-207ENST00000479988 DRC7Q8IY82 874 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 PARK7Q99497 189 aaKnown RBP6.83□□□□□ -1.32
CPS1-207ENST00000479988 PUS3Q9BZE2 481 aaKnown RBP6.83□□□□□ -1.32
CPS1-207ENST00000479988 ZSWIM6Q9HCJ5 1215 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 ZHX2Q9Y6X8 837 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 CAMTA1Q9Y6Y1 1673 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 GPAA1O43292 621 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 ZBTB43O43298 467 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 METAP2P50579 478 aaKnown RBP eCLIP6.83□□□□□ -1.32
CPS1-207ENST00000479988 DHX8Q14562 1220 aaKnown RBP6.83□□□□□ -1.32
CPS1-207ENST00000479988 BMS1Q14692 1282 aaKnown RBP6.83□□□□□ -1.32
CPS1-207ENST00000479988 ATL3Q6DD88 541 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 HEATR3Q7Z4Q2 680 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 ZNF710Q8N1W2 664 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 MAP4K1Q92918 833 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 CEP131Q9UPN4 1083 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 FSD2A1L4K1 749 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 F13A1P00488 732 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 RASA3Q14644 834 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 RTN1Q16799 776 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 ZSCAN23Q3MJ62 389 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 NALCNQ8IZF0 1738 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 ERMNQ8TAM6 284 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 MYOZ2Q9NPC6 264 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 ATP8A2Q9NTI2 1148 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 DDX19AQ9NUU7 478 aaKnown RBP6.83□□□□□ -1.32
CPS1-207ENST00000479988 CLIP2Q9UDT6 1046 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 SALL3Q9BXA9 1300 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 SLIT2O94813 1529 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 DLG5Q8TDM6 1919 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 NTSR2O95665 410 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 TSR1Q2NL82 804 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms