RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 KIAA2012Q0VF49 1180 aa16.87■□□□□ 0.29
CLDN18-203ENST00000479660 GRIPAP1Q4V328 841 aa16.87■□□□□ 0.29
CLDN18-203ENST00000479660 STRIP1Q5VSL9 837 aa16.87■□□□□ 0.29
CLDN18-203ENST00000479660 CCDC144CPQ8IYA2 1237 aa16.87■□□□□ 0.29
CLDN18-203ENST00000479660 ZSCAN10Q96SZ4 725 aaPredicted RBP16.87■□□□□ 0.29
CLDN18-203ENST00000479660 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
CLDN18-203ENST00000479660 SNED1Q8TER0 1413 aa16.87■□□□□ 0.29
CLDN18-203ENST00000479660 GOLGA8AA7E2F4 631 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 POLR3DP05423 398 aaPredicted RBP16.86■□□□□ 0.29
CLDN18-203ENST00000479660 CDC27P30260 824 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 SEC23AQ15436 765 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 KLHL40Q2TBA0 621 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 CPLX2Q6PUV4 134 aaKnown RBP16.86■□□□□ 0.29
CLDN18-203ENST00000479660 CNPY2Q9Y2B0 182 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 TCHHQ07283 1943 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 LAMB1P07942 1786 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 CDKL5O76039 1030 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 NCLP19338 710 aaKnown RBP16.86■□□□□ 0.29
CLDN18-203ENST00000479660 POLD1P28340 1107 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 SCNN1DP51172 638 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 DNM1Q05193 864 aaKnown RBP16.86■□□□□ 0.29
CLDN18-203ENST00000479660 CCDC93Q567U6 631 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 RTKN2Q8IZC4 609 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 ENAHQ8N8S7 591 aaPredicted RBP16.86■□□□□ 0.29
CLDN18-203ENST00000479660 MTFR1LQ9H019 292 aa16.86■□□□□ 0.29
CLDN18-203ENST00000479660 ORC3Q9UBD5 711 aaPredicted RBP16.86■□□□□ 0.29
CLDN18-203ENST00000479660 SAP30BPQ9UHR5 308 aaKnown RBP16.86■□□□□ 0.29
CLDN18-203ENST00000479660 FLT1P17948 1338 aa16.85■□□□□ 0.29
CLDN18-203ENST00000479660 USP17L3A6NCW0 530 aa16.85■□□□□ 0.29
CLDN18-203ENST00000479660 USP17L4A6NCW7 530 aa16.85■□□□□ 0.29
CLDN18-203ENST00000479660 PPIP5K2O43314 1243 aa16.85■□□□□ 0.29
CLDN18-203ENST00000479660 PLCD1P51178 756 aa16.85■□□□□ 0.29
CLDN18-203ENST00000479660 FOSBP53539 338 aa16.85■□□□□ 0.29
CLDN18-203ENST00000479660 FAM47AQ5JRC9 791 aa16.85■□□□□ 0.29
CLDN18-203ENST00000479660 USP17L1Q7RTZ2 530 aa16.85■□□□□ 0.29
CLDN18-203ENST00000479660 USP48Q86UV5 1035 aa16.85■□□□□ 0.29
CLDN18-203ENST00000479660 DYNLL2Q96FJ2 89 aa16.85■□□□□ 0.29
CLDN18-203ENST00000479660 FKBP1AP62942 108 aaKnown RBP16.84■□□□□ 0.29
CLDN18-203ENST00000479660 IFIT1BQ5T764 474 aaKnown RBP16.84■□□□□ 0.29
CLDN18-203ENST00000479660 HHIPL2Q6UWX4 724 aa16.84■□□□□ 0.29
CLDN18-203ENST00000479660 ZNF654Q8IZM8 581 aa16.84■□□□□ 0.29
CLDN18-203ENST00000479660 TEKT1Q969V4 418 aa16.84■□□□□ 0.29
CLDN18-203ENST00000479660 MKNK2Q9HBH9 465 aa16.84■□□□□ 0.29
CLDN18-203ENST00000479660 FAM217BQ9NTX9 383 aaPredicted RBP16.84■□□□□ 0.29
CLDN18-203ENST00000479660 DLEC1Q9Y238 1755 aa16.84■□□□□ 0.29
CLDN18-203ENST00000479660 TSPY2A6NKD2 308 aa16.84■□□□□ 0.29
CLDN18-203ENST00000479660 TGFB2P61812 414 aa16.84■□□□□ 0.29
CLDN18-203ENST00000479660 DACT2Q5SW24 774 aa16.84■□□□□ 0.29
CLDN18-203ENST00000479660 ZSCAN16Q9H4T2 348 aaPredicted RBP16.84■□□□□ 0.29
CLDN18-203ENST00000479660 ROBO3Q96MS0 1386 aa16.83■□□□□ 0.29
CLDN18-203ENST00000479660 NT5C2P49902 561 aa16.83■□□□□ 0.28
CLDN18-203ENST00000479660 RCAN1P53805 252 aa16.83■□□□□ 0.28
CLDN18-203ENST00000479660 R3HDM1Q15032 1099 aaKnown RBP16.83■□□□□ 0.28
CLDN18-203ENST00000479660 NTRK3Q16288 839 aa16.83■□□□□ 0.28
CLDN18-203ENST00000479660 FAM173BQ6P4H8 233 aa16.83■□□□□ 0.28
CLDN18-203ENST00000479660 KIAA0825Q8IV33 1275 aa16.83■□□□□ 0.28
CLDN18-203ENST00000479660 TMEM87AQ8NBN3 555 aa16.83■□□□□ 0.28
CLDN18-203ENST00000479660 NUP133Q8WUM0 1156 aa16.83■□□□□ 0.28
CLDN18-203ENST00000479660 NAV1Q8NEY1 1877 aa16.83■□□□□ 0.28
CLDN18-203ENST00000479660 FIBPO43427 364 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 DEKP35659 375 aaKnown RBP16.82■□□□□ 0.28
CLDN18-203ENST00000479660 KRT85P78386 507 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 RTN1Q16799 776 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 GPT2Q8TD30 523 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 C8orf76Q96K31 380 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 PSMD1Q99460 953 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 USP40Q9NVE5 1235 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 PIM2Q9P1W9 311 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 CDK5RAP2Q96SN8 1893 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 NID2Q14112 1375 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 SCN9AQ15858 1988 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 CCDC196A0A1B0GTZ2 297 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 IARSP41252 1262 aaKnown RBP16.82■□□□□ 0.28
CLDN18-203ENST00000479660 CRKP46108 304 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 TFAP4Q01664 338 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 GUCY1B3Q02153 619 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 RESTQ13127 1097 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 CSPP1Q1MSJ5 1256 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 FANCBQ8NB91 859 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 PHKBQ93100 1093 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 MRIQ9BWK5 157 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 ZNF287Q9HBT7 754 aa16.82■□□□□ 0.28
CLDN18-203ENST00000479660 NMT2O60551 498 aa16.81■□□□□ 0.28
CLDN18-203ENST00000479660 PICALMQ13492 652 aa16.81■□□□□ 0.28
CLDN18-203ENST00000479660 APOBEC3HQ6NTF7 200 aaKnown RBP16.81■□□□□ 0.28
CLDN18-203ENST00000479660 CATIPQ7Z7H3 387 aa16.81■□□□□ 0.28
CLDN18-203ENST00000479660 ZNF444Q8N0Y2 327 aaPredicted RBP16.81■□□□□ 0.28
CLDN18-203ENST00000479660 KIF13BQ9NQT8 1826 aa16.81■□□□□ 0.28
CLDN18-203ENST00000479660 MBD3O95983 291 aa16.8■□□□□ 0.28
CLDN18-203ENST00000479660 SLC44A5Q8NCS7 719 aa16.8■□□□□ 0.28
CLDN18-203ENST00000479660 FBXO18Q8NFZ0 1043 aa16.8■□□□□ 0.28
CLDN18-203ENST00000479660 PPP1R1BQ9UD71 204 aaPredicted RBP16.8■□□□□ 0.28
CLDN18-203ENST00000479660 YDJCA8MPS7 323 aa16.8■□□□□ 0.28
CLDN18-203ENST00000479660 GADD45BO75293 160 aaPredicted RBP16.8■□□□□ 0.28
CLDN18-203ENST00000479660 WDHD1O75717 1129 aaPredicted RBP16.8■□□□□ 0.28
CLDN18-203ENST00000479660 IFNAR1P17181 557 aa16.8■□□□□ 0.28
CLDN18-203ENST00000479660 SSRP1Q08945 709 aaKnown RBP16.8■□□□□ 0.28
CLDN18-203ENST00000479660 PPP2R5BQ15173 497 aa16.8■□□□□ 0.28
CLDN18-203ENST00000479660 SOGA3Q5TF21 947 aa16.8■□□□□ 0.28
CLDN18-203ENST00000479660 CDC42EP5Q6NZY7 148 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms