RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	CCDC84	Q86UT8	332 aa	Predicted RBP	18.34	■□□□□ 0.53
CCNL1-222	ENST00000479596	MAPKAPK5	Q8IW41	473 aa		18.34	■□□□□ 0.53
CCNL1-222	ENST00000479596	CLASRP	Q8N2M8	674 aa	Known RBP	18.34	■□□□□ 0.53
CCNL1-222	ENST00000479596	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	18.34	■□□□□ 0.53
CCNL1-222	ENST00000479596	ZSWIM8	A7E2V4	1837 aa		18.34	■□□□□ 0.53
CCNL1-222	ENST00000479596	RAB11FIP3	O75154	756 aa		18.33	■□□□□ 0.52
CCNL1-222	ENST00000479596	MAGEB6	Q8N7X4	407 aa		18.33	■□□□□ 0.52
CCNL1-222	ENST00000479596	DNAJC18	Q9H819	358 aa		18.33	■□□□□ 0.52
CCNL1-222	ENST00000479596	EFCC1	Q9HA90	598 aa		18.33	■□□□□ 0.52
CCNL1-222	ENST00000479596	PTPN22	Q9Y2R2	807 aa		18.33	■□□□□ 0.52
CCNL1-222	ENST00000479596	PTPRF	P10586	1907 aa		18.32	■□□□□ 0.52
CCNL1-222	ENST00000479596	C17orf99	Q6UX52	265 aa		18.32	■□□□□ 0.52
CCNL1-222	ENST00000479596	METTL16	Q86W50	562 aa	Known RBP	18.32	■□□□□ 0.52
CCNL1-222	ENST00000479596	MIGA1	Q8NAN2	632 aa		18.32	■□□□□ 0.52
CCNL1-222	ENST00000479596	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	18.32	■□□□□ 0.52
CCNL1-222	ENST00000479596	ARHGAP39	Q9C0H5	1083 aa		18.32	■□□□□ 0.52
CCNL1-222	ENST00000479596	DHX36	Q9H2U1	1008 aa	Known RBP	18.32	■□□□□ 0.52
CCNL1-222	ENST00000479596	IFIT2	P09913	472 aa	Known RBP	18.31	■□□□□ 0.52
CCNL1-222	ENST00000479596	MLLT1	Q03111	559 aa	Predicted RBP	18.31	■□□□□ 0.52
CCNL1-222	ENST00000479596	PI4KB	Q9UBF8	816 aa		18.31	■□□□□ 0.52
CCNL1-222	ENST00000479596	HERC5	Q9UII4	1024 aa	Known RBP	18.31	■□□□□ 0.52
CCNL1-222	ENST00000479596	BRCA2	P51587	3418 aa		18.3	■□□□□ 0.52
CCNL1-222	ENST00000479596	TRIM75P	A6NK02	468 aa		18.3	■□□□□ 0.52
CCNL1-222	ENST00000479596	CTGF	P29279	349 aa		18.3	■□□□□ 0.52
CCNL1-222	ENST00000479596	CAP2	P40123	477 aa		18.3	■□□□□ 0.52
CCNL1-222	ENST00000479596	JAG1	P78504	1218 aa		18.3	■□□□□ 0.52
CCNL1-222	ENST00000479596	LACTB	P83111	547 aa	Predicted RBP	18.3	■□□□□ 0.52
CCNL1-222	ENST00000479596	MAP3K12	Q12852	859 aa		18.3	■□□□□ 0.52
CCNL1-222	ENST00000479596	RIOK1	Q9BRS2	568 aa	Known RBP	18.3	■□□□□ 0.52
CCNL1-222	ENST00000479596	CPA4	Q9UI42	421 aa		18.3	■□□□□ 0.52
CCNL1-222	ENST00000479596	PALD1	Q9ULE6	856 aa		18.3	■□□□□ 0.52
CCNL1-222	ENST00000479596	ATAD5	Q96QE3	1844 aa		18.3	■□□□□ 0.52
CCNL1-222	ENST00000479596	CYP2C8	P10632	490 aa		18.29	■□□□□ 0.52
CCNL1-222	ENST00000479596	TMED8	Q6PL24	325 aa	Predicted RBP	18.29	■□□□□ 0.52
CCNL1-222	ENST00000479596	EDC3	Q96F86	508 aa	Known RBP	18.29	■□□□□ 0.52
CCNL1-222	ENST00000479596	SAP30BP	Q9UHR5	308 aa	Known RBP	18.29	■□□□□ 0.52
CCNL1-222	ENST00000479596	DDX60L	Q5H9U9	1706 aa	Known RBP	18.29	■□□□□ 0.52
CCNL1-222	ENST00000479596	GOLIM4	O00461	696 aa		18.28	■□□□□ 0.52
CCNL1-222	ENST00000479596	PDE6A	P16499	860 aa		18.28	■□□□□ 0.52
CCNL1-222	ENST00000479596	TTF1	Q15361	905 aa	Predicted RBP	18.28	■□□□□ 0.52
CCNL1-222	ENST00000479596	SHROOM1	Q2M3G4	852 aa	Predicted RBP	18.28	■□□□□ 0.52
CCNL1-222	ENST00000479596	FASTKD5	Q7L8L6	764 aa	Known RBP	18.28	■□□□□ 0.52
CCNL1-222	ENST00000479596	PARK7	Q99497	189 aa	Known RBP	18.28	■□□□□ 0.52
CCNL1-222	ENST00000479596	DNAJC2	Q99543	621 aa	Known RBP	18.28	■□□□□ 0.52
CCNL1-222	ENST00000479596	BCL11A	Q9H165	835 aa		18.28	■□□□□ 0.52
CCNL1-222	ENST00000479596	LOC285556	D6RIA3	1793 aa		18.27	■□□□□ 0.52
CCNL1-222	ENST00000479596	TCRBV5S4A2T	A0A5A2	114 aa		18.27	■□□□□ 0.52
CCNL1-222	ENST00000479596	SMARCA5	O60264	1052 aa	Predicted RBP	18.27	■□□□□ 0.52
CCNL1-222	ENST00000479596	BCR	P11274	1271 aa		18.27	■□□□□ 0.52
CCNL1-222	ENST00000479596	SLC4A8	Q2Y0W8	1093 aa		18.27	■□□□□ 0.52
CCNL1-222	ENST00000479596	GADL1	Q6ZQY3	521 aa		18.27	■□□□□ 0.52
CCNL1-222	ENST00000479596	CERS3	Q8IU89	383 aa		18.27	■□□□□ 0.52
CCNL1-222	ENST00000479596	ARMC5	Q96C12	935 aa		18.27	■□□□□ 0.52
CCNL1-222	ENST00000479596	SLC45A1	Q9Y2W3	748 aa		18.27	■□□□□ 0.52
CCNL1-222	ENST00000479596	PTCH2	Q9Y6C5	1203 aa		18.27	■□□□□ 0.52
CCNL1-222	ENST00000479596	ATP5J	P18859	108 aa		18.26	■□□□□ 0.51
CCNL1-222	ENST00000479596	SPP2	Q13103	211 aa		18.26	■□□□□ 0.51
CCNL1-222	ENST00000479596	TREML2	Q5T2D2	321 aa		18.26	■□□□□ 0.51
CCNL1-222	ENST00000479596	SLC9C2	Q5TAH2	1124 aa		18.26	■□□□□ 0.51
CCNL1-222	ENST00000479596	FOXP4	Q8IVH2	680 aa	Predicted RBP	18.26	■□□□□ 0.51
CCNL1-222	ENST00000479596	ZNF280C	Q8ND82	737 aa		18.26	■□□□□ 0.51
CCNL1-222	ENST00000479596	LRRCC1	Q9C099	1032 aa		18.26	■□□□□ 0.51
CCNL1-222	ENST00000479596	BOLA2	Q9H3K6	86 aa		18.26	■□□□□ 0.51
CCNL1-222	ENST00000479596	ZNF532	Q9HCE3	1301 aa		18.25	■□□□□ 0.51
CCNL1-222	ENST00000479596	USP17L5	A8MUK1	530 aa		18.25	■□□□□ 0.51
CCNL1-222	ENST00000479596	USP5	P45974	858 aa		18.25	■□□□□ 0.51
CCNL1-222	ENST00000479596	RRP1	P56182	461 aa	Known RBP	18.25	■□□□□ 0.51
CCNL1-222	ENST00000479596	TRIM47	Q96LD4	638 aa		18.25	■□□□□ 0.51
CCNL1-222	ENST00000479596	HAUS7	Q99871	368 aa		18.25	■□□□□ 0.51
CCNL1-222	ENST00000479596	PAG1	Q9NWQ8	432 aa		18.25	■□□□□ 0.51
CCNL1-222	ENST00000479596	AGTPBP1	Q9UPW5	1226 aa		18.25	■□□□□ 0.51
CCNL1-222	ENST00000479596	MYH1	P12882	1939 aa		18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	MAGEB6P1	A0A0J9YX57	407 aa		18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	ECM2	O94769	699 aa	Predicted RBP	18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	GDF11	O95390	407 aa		18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	HLA-DOA	P06340	250 aa		18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	KIF22	Q14807	665 aa		18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	ARHGEF6	Q15052	776 aa		18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	SLFNL1	Q499Z3	407 aa		18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	PROCA1	Q8NCQ7	364 aa	Predicted RBP	18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	TBC1D2	Q9BYX2	928 aa		18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	DCTPP1	Q9H773	170 aa		18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	PCDHB15	Q9Y5E8	787 aa		18.24	■□□□□ 0.51
CCNL1-222	ENST00000479596	MKI67	P46013	3256 aa	Known RBP	18.23	■□□□□ 0.51
CCNL1-222	ENST00000479596	GNRH1	P01148	92 aa		18.23	■□□□□ 0.51
CCNL1-222	ENST00000479596	CHGB	P05060	677 aa		18.23	■□□□□ 0.51
CCNL1-222	ENST00000479596	PSMC4	P43686	418 aa		18.23	■□□□□ 0.51
CCNL1-222	ENST00000479596	HMGCS2	P54868	508 aa		18.23	■□□□□ 0.51
CCNL1-222	ENST00000479596	SH3D19	Q5HYK7	790 aa		18.23	■□□□□ 0.51
CCNL1-222	ENST00000479596	TATDN1	Q6P1N9	297 aa		18.23	■□□□□ 0.51
CCNL1-222	ENST00000479596	LCORL	Q8N3X6	602 aa		18.23	■□□□□ 0.51
CCNL1-222	ENST00000479596	ZNF333	Q96JL9	665 aa		18.23	■□□□□ 0.51
CCNL1-222	ENST00000479596	WDR18	Q9BV38	432 aa		18.23	■□□□□ 0.51
CCNL1-222	ENST00000479596	EHD4	Q9H223	541 aa		18.23	■□□□□ 0.51
CCNL1-222	ENST00000479596	ZBTB21	Q9ULJ3	1066 aa		18.23	■□□□□ 0.51
CCNL1-222	ENST00000479596	NAV1	Q8NEY1	1877 aa		18.22	■□□□□ 0.51
CCNL1-222	ENST00000479596	RBBP6	Q7Z6E9	1792 aa	Known RBP	18.22	■□□□□ 0.51
CCNL1-222	ENST00000479596	POTEF	A5A3E0	1075 aa		18.22	■□□□□ 0.51
CCNL1-222	ENST00000479596	ASNS	P08243	561 aa		18.22	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms