RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 FOXP4Q8IVH2 680 aaPredicted RBP12.78□□□□□ -0.36
SP140-210ENST00000479539 MCOLN1Q9GZU1 580 aa12.78□□□□□ -0.36
SP140-210ENST00000479539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.78□□□□□ -0.36
SP140-210ENST00000479539 PICK1Q9NRD5 415 aa12.78□□□□□ -0.36
SP140-210ENST00000479539 HERC5Q9UII4 1024 aaKnown RBP12.78□□□□□ -0.36
SP140-210ENST00000479539 BTBD19C9JJ37 291 aa12.77□□□□□ -0.37
SP140-210ENST00000479539 FKTNO75072 461 aa12.77□□□□□ -0.37
SP140-210ENST00000479539 PTPRAP18433 802 aa12.77□□□□□ -0.37
SP140-210ENST00000479539 CRHR2Q13324 411 aa12.77□□□□□ -0.37
SP140-210ENST00000479539 FAM43AQ8N2R8 423 aa12.77□□□□□ -0.37
SP140-210ENST00000479539 ZCCHC17Q9NP64 241 aaKnown RBP12.77□□□□□ -0.37
SP140-210ENST00000479539 PALD1Q9ULE6 856 aa12.77□□□□□ -0.37
SP140-210ENST00000479539 ZHX2Q9Y6X8 837 aa12.77□□□□□ -0.37
SP140-210ENST00000479539 ZNF532Q9HCE3 1301 aa12.77□□□□□ -0.37
SP140-210ENST00000479539 AKAP11Q9UKA4 1901 aa12.76□□□□□ -0.37
SP140-210ENST00000479539 MAGEB6P1A0A0J9YX57 407 aa12.76□□□□□ -0.37
SP140-210ENST00000479539 FAM196BA6NMK8 535 aa12.76□□□□□ -0.37
SP140-210ENST00000479539 ADD2P35612 726 aa12.76□□□□□ -0.37
SP140-210ENST00000479539 DGKZQ13574 1117 aa12.76□□□□□ -0.37
SP140-210ENST00000479539 MOGSQ13724 837 aa12.76□□□□□ -0.37
SP140-210ENST00000479539 RRP1BQ14684 758 aaKnown RBP12.76□□□□□ -0.37
SP140-210ENST00000479539 CTU1Q7Z7A3 348 aaKnown RBP12.76□□□□□ -0.37
SP140-210ENST00000479539 ABHD8Q96I13 439 aa12.76□□□□□ -0.37
SP140-210ENST00000479539 AFG3L2Q9Y4W6 797 aa12.76□□□□□ -0.37
SP140-210ENST00000479539 CAP2P40123 477 aa12.75□□□□□ -0.37
SP140-210ENST00000479539 USP5P45974 858 aa12.75□□□□□ -0.37
SP140-210ENST00000479539 UBE3CQ15386 1083 aa12.75□□□□□ -0.37
SP140-210ENST00000479539 TAF1CQ15572 869 aaPredicted RBP12.75□□□□□ -0.37
SP140-210ENST00000479539 ANKRD23Q86SG2 305 aa12.75□□□□□ -0.37
SP140-210ENST00000479539 GCC1Q96CN9 775 aa12.75□□□□□ -0.37
SP140-210ENST00000479539 GPATCH3Q96I76 525 aa12.75□□□□□ -0.37
SP140-210ENST00000479539 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.75□□□□□ -0.37
SP140-210ENST00000479539 DNAJC18Q9H819 358 aa12.75□□□□□ -0.37
SP140-210ENST00000479539 ZFYVE28Q9HCC9 887 aa12.75□□□□□ -0.37
SP140-210ENST00000479539 SAP30BPQ9UHR5 308 aaKnown RBP12.75□□□□□ -0.37
SP140-210ENST00000479539 MYH13Q9UKX3 1938 aa12.75□□□□□ -0.37
SP140-210ENST00000479539 SUPT16HQ9Y5B9 1047 aaKnown RBP12.75□□□□□ -0.37
SP140-210ENST00000479539 MYH2Q9UKX2 1941 aa12.74□□□□□ -0.37
SP140-210ENST00000479539 TTC41PQ6P2S7 1318 aa12.74□□□□□ -0.37
SP140-210ENST00000479539 A0A0G2JLL6 359 aaPredicted RBP12.74□□□□□ -0.37
SP140-210ENST00000479539 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
SP140-210ENST00000479539 HLA-DOAP06340 250 aa12.74□□□□□ -0.37
SP140-210ENST00000479539 PKN2Q16513 984 aaKnown RBP12.74□□□□□ -0.37
SP140-210ENST00000479539 PRRT2Q7Z6L0 340 aaPredicted RBP12.74□□□□□ -0.37
SP140-210ENST00000479539 TTC6Q86TZ1 520 aa12.74□□□□□ -0.37
SP140-210ENST00000479539 CRNKL1Q9BZJ0 848 aaKnown RBP12.74□□□□□ -0.37
SP140-210ENST00000479539 TLR2O60603 784 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 CHGBP05060 677 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 SLFNL1Q499Z3 407 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 ANKRD45Q5TZF3 282 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 TSHZ3Q63HK5 1081 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 ZSCAN25Q6NSZ9 544 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 GPAT2Q6NUI2 795 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 FASTKD5Q7L8L6 764 aaKnown RBP12.73□□□□□ -0.37
SP140-210ENST00000479539 LCORLQ8N3X6 602 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 KBTBD3Q8NAB2 608 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 EXOC6Q8TAG9 804 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 PI4K2BQ8TCG2 481 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 OTUD7AQ8TE49 926 aaPredicted RBP12.73□□□□□ -0.37
SP140-210ENST00000479539 TBC1D2Q9BYX2 928 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 EHD4Q9H223 541 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 GINM1Q9NU53 330 aa12.73□□□□□ -0.37
SP140-210ENST00000479539 SALL3Q9BXA9 1300 aa12.72□□□□□ -0.37
SP140-210ENST00000479539 USP17L5A8MUK1 530 aa12.72□□□□□ -0.37
SP140-210ENST00000479539 PDHXO00330 501 aa12.72□□□□□ -0.37
SP140-210ENST00000479539 ERC2O15083 957 aa12.72□□□□□ -0.37
SP140-210ENST00000479539 GLRX3O76003 335 aaKnown RBP12.72□□□□□ -0.37
SP140-210ENST00000479539 ASNSP08243 561 aa12.72□□□□□ -0.37
SP140-210ENST00000479539 PLCD1P51178 756 aa12.72□□□□□ -0.37
SP140-210ENST00000479539 JAG1P78504 1218 aa12.72□□□□□ -0.37
SP140-210ENST00000479539 SP3Q02447 781 aa12.72□□□□□ -0.37
SP140-210ENST00000479539 TATDN1Q6P1N9 297 aa12.72□□□□□ -0.37
SP140-210ENST00000479539 CCDC84Q86UT8 332 aaPredicted RBP12.72□□□□□ -0.37
SP140-210ENST00000479539 CRACR2BQ8N4Y2 399 aaPredicted RBP12.72□□□□□ -0.37
SP140-210ENST00000479539 ERO1AQ96HE7 468 aa12.72□□□□□ -0.37
SP140-210ENST00000479539 RWDD1Q9H446 243 aaPredicted RBP12.72□□□□□ -0.37
SP140-210ENST00000479539 ARMT1Q9H993 441 aa12.72□□□□□ -0.37
SP140-210ENST00000479539 DCP1AQ9NPI6 582 aaPredicted RBP12.72□□□□□ -0.37
SP140-210ENST00000479539 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.72□□□□□ -0.37
SP140-210ENST00000479539 SERPINB13Q9UIV8 391 aa12.72□□□□□ -0.37
SP140-210ENST00000479539 TRIM75PA6NK02 468 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 MBD4O95243 580 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 MX1P20591 662 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 GABPAQ06546 454 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 SPP2Q13103 211 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 C17orf99Q6UX52 265 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 SMC5Q8IY18 1101 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 ZNF280CQ8ND82 737 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 SDR42E1Q8WUS8 393 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 WDR18Q9BV38 432 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 PUS7LQ9H0K6 701 aaKnown RBP12.71□□□□□ -0.37
SP140-210ENST00000479539 ATP8A2Q9NTI2 1148 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 MCM9Q9NXL9 1143 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 ZBTB47Q9UFB7 747 aaPredicted RBP12.71□□□□□ -0.37
SP140-210ENST00000479539 STAP2Q9UGK3 403 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 SLC45A1Q9Y2W3 748 aa12.71□□□□□ -0.37
SP140-210ENST00000479539 RNF113AO15541 343 aaKnown RBP12.7□□□□□ -0.38
SP140-210ENST00000479539 PRKAB2O43741 272 aa12.7□□□□□ -0.38
SP140-210ENST00000479539 IGHDP01880 384 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms