RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SAP30BPQ9UHR5 308 aaKnown RBP21.3■■□□□ 1
ECHDC1-216ENST00000479525 AFG3L2Q9Y4W6 797 aa21.3■■□□□ 1
ECHDC1-216ENST00000479525 A0A0G2JLL6 359 aaPredicted RBP21.29■■□□□ 1
ECHDC1-216ENST00000479525 MAP3K10Q02779 954 aa21.29■■□□□ 1
ECHDC1-216ENST00000479525 SLC9C1Q4G0N8 1177 aa21.29■■□□□ 1
ECHDC1-216ENST00000479525 PRRT2Q7Z6L0 340 aaPredicted RBP21.29■■□□□ 1
ECHDC1-216ENST00000479525 MIGA1Q8NAN2 632 aa21.29■■□□□ 1
ECHDC1-216ENST00000479525 LOC285556D6RIA3 1793 aa21.29■■□□□ 1
ECHDC1-216ENST00000479525 DOCK3Q8IZD9 2030 aa21.29■■□□□ 1
ECHDC1-216ENST00000479525 IDH1O75874 414 aaKnown RBP21.28■■□□□ 1
ECHDC1-216ENST00000479525 PSMC4P43686 418 aa21.28■■□□□ 1
ECHDC1-216ENST00000479525 KIF22Q14807 665 aa21.28■■□□□ 1
ECHDC1-216ENST00000479525 C20orf194Q5TEA3 1177 aa21.28■■□□□ 1
ECHDC1-216ENST00000479525 TRIM47Q96LD4 638 aa21.28■■□□□ 1
ECHDC1-216ENST00000479525 ZCCHC17Q9NP64 241 aaKnown RBP21.28■■□□□ 1
ECHDC1-216ENST00000479525 CXCL11O14625 94 aa21.27■■□□□ 1
ECHDC1-216ENST00000479525 CTNND1O60716 968 aaKnown RBP21.27■■□□□ 1
ECHDC1-216ENST00000479525 CYP7A1P22680 504 aa21.27■■□□□ 1
ECHDC1-216ENST00000479525 TREML2Q5T2D2 321 aa21.27■■□□□ 1
ECHDC1-216ENST00000479525 ARMC5Q96C12 935 aa21.27■■□□□ 1
ECHDC1-216ENST00000479525 FLT1P17948 1338 aa21.26■□□□□ 0.99
ECHDC1-216ENST00000479525 FMNL1O95466 1100 aaPredicted RBP21.26■□□□□ 0.99
ECHDC1-216ENST00000479525 JAG1P78504 1218 aa21.26■□□□□ 0.99
ECHDC1-216ENST00000479525 SIRT2Q8IXJ6 389 aa21.26■□□□□ 0.99
ECHDC1-216ENST00000479525 ZNF333Q96JL9 665 aa21.26■□□□□ 0.99
ECHDC1-216ENST00000479525 PALD1Q9ULE6 856 aa21.26■□□□□ 0.99
ECHDC1-216ENST00000479525 NAV1Q8NEY1 1877 aa21.26■□□□□ 0.99
ECHDC1-216ENST00000479525 OSBPP22059 807 aa21.25■□□□□ 0.99
ECHDC1-216ENST00000479525 MAGEB6Q8N7X4 407 aa21.25■□□□□ 0.99
ECHDC1-216ENST00000479525 PARK7Q99497 189 aaKnown RBP21.25■□□□□ 0.99
ECHDC1-216ENST00000479525 DNAJC18Q9H819 358 aa21.25■□□□□ 0.99
ECHDC1-216ENST00000479525 GDF11O95390 407 aa21.24■□□□□ 0.99
ECHDC1-216ENST00000479525 BAG3O95817 575 aa21.24■□□□□ 0.99
ECHDC1-216ENST00000479525 SPP2Q13103 211 aa21.24■□□□□ 0.99
ECHDC1-216ENST00000479525 RHPN1Q8TCX5 695 aa21.24■□□□□ 0.99
ECHDC1-216ENST00000479525 RCAN3Q9UKA8 241 aa21.24■□□□□ 0.99
ECHDC1-216ENST00000479525 COL2A1P02458 1487 aaPredicted RBP21.24■□□□□ 0.99
ECHDC1-216ENST00000479525 TBC1D12O60347 775 aa21.23■□□□□ 0.99
ECHDC1-216ENST00000479525 BCRP11274 1271 aa21.23■□□□□ 0.99
ECHDC1-216ENST00000479525 HMGCS2P54868 508 aa21.23■□□□□ 0.99
ECHDC1-216ENST00000479525 EDC3Q96F86 508 aaKnown RBP21.23■□□□□ 0.99
ECHDC1-216ENST00000479525 ZNF512BQ96KM6 892 aaPredicted RBP21.23■□□□□ 0.99
ECHDC1-216ENST00000479525 GABRQQ9UN88 632 aa21.23■□□□□ 0.99
ECHDC1-216ENST00000479525 NPM3O75607 178 aaKnown RBP21.23■□□□□ 0.99
ECHDC1-216ENST00000479525 CAP2P40123 477 aa21.23■□□□□ 0.99
ECHDC1-216ENST00000479525 ARHGEF6Q15052 776 aa21.23■□□□□ 0.99
ECHDC1-216ENST00000479525 MTFR1Q15390 333 aa21.23■□□□□ 0.99
ECHDC1-216ENST00000479525 FASTKD5Q7L8L6 764 aaKnown RBP21.23■□□□□ 0.99
ECHDC1-216ENST00000479525 MYPNQ86TC9 1320 aa21.22■□□□□ 0.99
ECHDC1-216ENST00000479525 PPP4CP60510 307 aa21.22■□□□□ 0.99
ECHDC1-216ENST00000479525 PRKCZQ05513 592 aa21.22■□□□□ 0.99
ECHDC1-216ENST00000479525 SLFNL1Q499Z3 407 aa21.22■□□□□ 0.99
ECHDC1-216ENST00000479525 CRACR2BQ8N4Y2 399 aaPredicted RBP21.22■□□□□ 0.99
ECHDC1-216ENST00000479525 SRRDQ9UH36 339 aa21.22■□□□□ 0.99
ECHDC1-216ENST00000479525 MYH7P12883 1935 aa21.21■□□□□ 0.99
ECHDC1-216ENST00000479525 PEX10O60683 326 aa21.21■□□□□ 0.99
ECHDC1-216ENST00000479525 EVX2Q03828 476 aa21.21■□□□□ 0.99
ECHDC1-216ENST00000479525 ERC1Q8IUD2 1116 aa21.21■□□□□ 0.99
ECHDC1-216ENST00000479525 ANKRD13CQ8N6S4 541 aa21.21■□□□□ 0.99
ECHDC1-216ENST00000479525 SMCR8Q8TEV9 937 aaPredicted RBP21.21■□□□□ 0.99
ECHDC1-216ENST00000479525 DNAJC2Q99543 621 aaKnown RBP21.21■□□□□ 0.99
ECHDC1-216ENST00000479525 TMEM106CQ9BVX2 250 aa21.21■□□□□ 0.99
ECHDC1-216ENST00000479525 ZBTB40Q9NUA8 1239 aa21.21■□□□□ 0.99
ECHDC1-216ENST00000479525 PI4KBQ9UBF8 816 aa21.21■□□□□ 0.99
ECHDC1-216ENST00000479525 DDX60LQ5H9U9 1706 aaKnown RBP21.21■□□□□ 0.99
ECHDC1-216ENST00000479525 BAZ2AQ9UIF9 1905 aaKnown RBP21.2■□□□□ 0.98
ECHDC1-216ENST00000479525 PLCG2P16885 1265 aa21.2■□□□□ 0.98
ECHDC1-216ENST00000479525 NBPF11Q86T75 865 aa21.2■□□□□ 0.98
ECHDC1-216ENST00000479525 ZNF280CQ8ND82 737 aa21.2■□□□□ 0.98
ECHDC1-216ENST00000479525 RAET1EQ8TD07 263 aa21.2■□□□□ 0.98
ECHDC1-216ENST00000479525 DDX19BQ9UMR2 479 aa21.2■□□□□ 0.98
ECHDC1-216ENST00000479525 AGTPBP1Q9UPW5 1226 aa21.2■□□□□ 0.98
ECHDC1-216ENST00000479525 MAP4K4O95819 1239 aaPredicted RBP21.19■□□□□ 0.98
ECHDC1-216ENST00000479525 USP5P45974 858 aa21.19■□□□□ 0.98
ECHDC1-216ENST00000479525 TRIM34Q9BYJ4 488 aa21.19■□□□□ 0.98
ECHDC1-216ENST00000479525 TAOK2Q9UL54 1235 aa21.19■□□□□ 0.98
ECHDC1-216ENST00000479525 MYH8P13535 1937 aa21.18■□□□□ 0.98
ECHDC1-216ENST00000479525 USP17L5A8MUK1 530 aa21.18■□□□□ 0.98
ECHDC1-216ENST00000479525 CHGBP05060 677 aa21.18■□□□□ 0.98
ECHDC1-216ENST00000479525 MTMR2Q13614 643 aa21.18■□□□□ 0.98
ECHDC1-216ENST00000479525 HERC5Q9UII4 1024 aaKnown RBP21.18■□□□□ 0.98
ECHDC1-216ENST00000479525 GOLIM4O00461 696 aa21.17■□□□□ 0.98
ECHDC1-216ENST00000479525 SMARCA5O60264 1052 aaPredicted RBP21.17■□□□□ 0.98
ECHDC1-216ENST00000479525 MS4A1P11836 297 aa21.17■□□□□ 0.98
ECHDC1-216ENST00000479525 FCGRTP55899 365 aa21.17■□□□□ 0.98
ECHDC1-216ENST00000479525 KIF1BPQ96EK5 621 aa21.17■□□□□ 0.98
ECHDC1-216ENST00000479525 DHX36Q9H2U1 1008 aaKnown RBP21.17■□□□□ 0.98
ECHDC1-216ENST00000479525 BIN2Q9UBW5 565 aaPredicted RBP21.17■□□□□ 0.98
ECHDC1-216ENST00000479525 PLXNB2O15031 1838 aa21.16■□□□□ 0.98
ECHDC1-216ENST00000479525 IFIT2P09913 472 aaKnown RBP21.16■□□□□ 0.98
ECHDC1-216ENST00000479525 ELNP15502 786 aa21.16■□□□□ 0.98
ECHDC1-216ENST00000479525 GRK4P32298 578 aa21.16■□□□□ 0.98
ECHDC1-216ENST00000479525 MAP3K12Q12852 859 aa21.16■□□□□ 0.98
ECHDC1-216ENST00000479525 PRPF38BQ5VTL8 546 aaKnown RBP21.16■□□□□ 0.98
ECHDC1-216ENST00000479525 RPAP2Q8IXW5 612 aaPredicted RBP21.16■□□□□ 0.98
ECHDC1-216ENST00000479525 CLASRPQ8N2M8 674 aaKnown RBP21.16■□□□□ 0.98
ECHDC1-216ENST00000479525 ZYXQ15942 572 aaKnown RBP21.15■□□□□ 0.98
ECHDC1-216ENST00000479525 HSP90AB4PQ58FF6 505 aa21.15■□□□□ 0.98
ECHDC1-216ENST00000479525 BOLA2Q9H3K6 86 aa21.15■□□□□ 0.98
ECHDC1-216ENST00000479525 ZBTB21Q9ULJ3 1066 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms