RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 ANKRD13CQ8N6S4 541 aa8.26□□□□□ -1.09
VCP-205ENST00000479300 WDR66Q8TBY9 1149 aa8.26□□□□□ -1.09
VCP-205ENST00000479300 UBE2Q2Q8WVN8 375 aa8.26□□□□□ -1.09
VCP-205ENST00000479300 SSH1Q8WYL5 1049 aa8.26□□□□□ -1.09
VCP-205ENST00000479300 RNF25Q96BH1 459 aaPredicted RBP8.26□□□□□ -1.09
VCP-205ENST00000479300 API5Q9BZZ5 524 aaKnown RBP8.26□□□□□ -1.09
VCP-205ENST00000479300 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.26□□□□□ -1.09
VCP-205ENST00000479300 USP44Q9H0E7 712 aa8.26□□□□□ -1.09
VCP-205ENST00000479300 MTMR10Q9NXD2 777 aa8.26□□□□□ -1.09
VCP-205ENST00000479300 GJD2Q9UKL4 321 aa8.26□□□□□ -1.09
VCP-205ENST00000479300 CIZ1Q9ULV3 898 aaPredicted RBP8.26□□□□□ -1.09
VCP-205ENST00000479300 SLC45A1Q9Y2W3 748 aa8.26□□□□□ -1.09
VCP-205ENST00000479300 GAKO14976 1311 aa8.26□□□□□ -1.09
VCP-205ENST00000479300 MYH2Q9UKX2 1941 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 EYSQ5T1H1 3165 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 VCANP13611 3396 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 TRIM75PA6NK02 468 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 FAM196BA6NMK8 535 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 EYA2O00167 538 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 PEX10O60683 326 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 IFIT1P09914 478 aaKnown RBP8.25□□□□□ -1.09
VCP-205ENST00000479300 PHKA1P46020 1223 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 RRP1BQ14684 758 aaKnown RBP8.25□□□□□ -1.09
VCP-205ENST00000479300 GPR153Q6NV75 609 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 FASTKD5Q7L8L6 764 aaKnown RBP8.25□□□□□ -1.09
VCP-205ENST00000479300 NECAB2Q7Z6G3 386 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 ZNF384Q8TF68 577 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 LPIN2Q92539 896 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 COL25A1Q9BXS0 654 aaPredicted RBP8.25□□□□□ -1.09
VCP-205ENST00000479300 IDI2Q9BXS1 227 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 TAOK2Q9UL54 1235 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 STXBP5LQ9Y2K9 1186 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 PFASO15067 1338 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 SALL1Q9NSC2 1324 aa8.25□□□□□ -1.09
VCP-205ENST00000479300 IPO8O15397 1037 aaKnown RBP8.24□□□□□ -1.09
VCP-205ENST00000479300 ENTPD3O75355 529 aa8.24□□□□□ -1.09
VCP-205ENST00000479300 LDHBP07195 334 aaKnown RBP8.24□□□□□ -1.09
VCP-205ENST00000479300 UBTFL1P0CB47 393 aaPredicted RBP8.24□□□□□ -1.09
VCP-205ENST00000479300 ADORA1P30542 326 aa8.24□□□□□ -1.09
VCP-205ENST00000479300 LRIT3Q3SXY7 679 aa8.24□□□□□ -1.09
VCP-205ENST00000479300 TRIB2Q92519 343 aa8.24□□□□□ -1.09
VCP-205ENST00000479300 CDCA7LQ96GN5 454 aa8.24□□□□□ -1.09
VCP-205ENST00000479300 PICK1Q9NRD5 415 aa8.24□□□□□ -1.09
VCP-205ENST00000479300 AGTPBP1Q9UPW5 1226 aa8.24□□□□□ -1.09
VCP-205ENST00000479300 DNAH12Q6ZR08 3092 aa8.24□□□□□ -1.09
VCP-205ENST00000479300 CTNND1O60716 968 aaKnown RBP8.23□□□□□ -1.09
VCP-205ENST00000479300 HMGCRP04035 888 aa8.23□□□□□ -1.09
VCP-205ENST00000479300 SLC5A1P13866 664 aa8.23□□□□□ -1.09
VCP-205ENST00000479300 NUBP1P53384 320 aa8.23□□□□□ -1.09
VCP-205ENST00000479300 RHBDL3P58872 404 aa8.23□□□□□ -1.09
VCP-205ENST00000479300 FAM110CQ1W6H9 321 aa8.23□□□□□ -1.09
VCP-205ENST00000479300 MAP3K21Q5TCX8 1036 aa8.23□□□□□ -1.09
VCP-205ENST00000479300 POTEEQ6S8J3 1075 aa8.23□□□□□ -1.09
VCP-205ENST00000479300 ANKLE1Q8NAG6 615 aa8.23□□□□□ -1.09
VCP-205ENST00000479300 SMCR8Q8TEV9 937 aaPredicted RBP8.23□□□□□ -1.09
VCP-205ENST00000479300 OGDHLQ9ULD0 1010 aa8.23□□□□□ -1.09
VCP-205ENST00000479300 NOB1Q9ULX3 412 aaKnown RBP8.23□□□□□ -1.09
VCP-205ENST00000479300 SIPA1L1O43166 1804 aa8.23□□□□□ -1.09
VCP-205ENST00000479300 COL2A1P02458 1487 aaPredicted RBP8.23□□□□□ -1.09
VCP-205ENST00000479300 ATAD5Q96QE3 1844 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 COL6A1P12109 1028 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 CAPN2P17655 700 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 JAG1P78504 1218 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 SPP2Q13103 211 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 RASGRF1Q13972 1273 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 ATP2B3Q16720 1220 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 SHROOM1Q2M3G4 852 aaPredicted RBP8.22□□□□□ -1.09
VCP-205ENST00000479300 TDHQ8IZJ6 230 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 COA7Q96BR5 231 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 GUCD1Q96NT3 240 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 NBPF3Q9H094 633 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 SIL1Q9H173 461 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 ASCC2Q9H1I8 757 aaPredicted RBP8.22□□□□□ -1.09
VCP-205ENST00000479300 C11orf49Q9H6J7 331 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 GNL3LQ9NVN8 582 aaKnown RBP8.22□□□□□ -1.09
VCP-205ENST00000479300 LRRFIP2Q9Y608 721 aaKnown RBP8.22□□□□□ -1.09
VCP-205ENST00000479300 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.22□□□□□ -1.09
VCP-205ENST00000479300 PRUNE2Q8WUY3 3088 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 RPTORQ8N122 1335 aa8.22□□□□□ -1.09
VCP-205ENST00000479300 POTEB2H3BUK9 544 aa8.21□□□□□ -1.1
VCP-205ENST00000479300 GNAI3P08754 354 aa8.21□□□□□ -1.1
VCP-205ENST00000479300 BTDP43251 543 aa8.21□□□□□ -1.1
VCP-205ENST00000479300 HMGCS2P54868 508 aa8.21□□□□□ -1.1
VCP-205ENST00000479300 PICALMQ13492 652 aa8.21□□□□□ -1.1
VCP-205ENST00000479300 LRRC26Q2I0M4 334 aa8.21□□□□□ -1.1
VCP-205ENST00000479300 CCDC102BQ68D86 513 aa8.21□□□□□ -1.1
VCP-205ENST00000479300 ZSCAN29Q8IWY8 852 aaPredicted RBP8.21□□□□□ -1.1
VCP-205ENST00000479300 TRMT2AQ8IZ69 625 aaKnown RBP8.21□□□□□ -1.1
VCP-205ENST00000479300 PROCA1Q8NCQ7 364 aaPredicted RBP8.21□□□□□ -1.1
VCP-205ENST00000479300 FAM163AQ96GL9 167 aaPredicted RBP8.21□□□□□ -1.1
VCP-205ENST00000479300 TXNRD2Q9NNW7 524 aa8.21□□□□□ -1.1
VCP-205ENST00000479300 HMX1Q9NP08 348 aaPredicted RBP8.21□□□□□ -1.1
VCP-205ENST00000479300 CEP126Q9P2H0 1117 aa8.21□□□□□ -1.1
VCP-205ENST00000479300 MORF4L1Q9UBU8 362 aa8.21□□□□□ -1.1
VCP-205ENST00000479300 PA2G4Q9UQ80 394 aaKnown RBP8.21□□□□□ -1.1
VCP-205ENST00000479300 MAST2Q6P0Q8 1798 aa8.2□□□□□ -1.1
VCP-205ENST00000479300 FRMPD3Q5JV73 1810 aa8.2□□□□□ -1.1
VCP-205ENST00000479300 TTC28Q96AY4 2481 aa8.2□□□□□ -1.1
VCP-205ENST00000479300 GPR75-ASB3A0A0A6YYF3 556 aa8.2□□□□□ -1.1
VCP-205ENST00000479300 TBC1D12O60347 775 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms