RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CFHR5Q9BXR6 569 aa18.65■□□□□ 0.58
C9orf3-217ENST00000479161 HLA-DOAP06340 250 aa18.64■□□□□ 0.57
C9orf3-217ENST00000479161 CTCFP49711 727 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-217ENST00000479161 PPIL2Q13356 520 aa18.64■□□□□ 0.57
C9orf3-217ENST00000479161 GIMAP6Q6P9H5 292 aa18.64■□□□□ 0.57
C9orf3-217ENST00000479161 OPTNQ96CV9 577 aa18.64■□□□□ 0.57
C9orf3-217ENST00000479161 TBC1D2Q9BYX2 928 aa18.64■□□□□ 0.57
C9orf3-217ENST00000479161 DOCK1Q14185 1865 aa18.63■□□□□ 0.57
C9orf3-217ENST00000479161 ALDH1A1P00352 501 aa18.63■□□□□ 0.57
C9orf3-217ENST00000479161 INPP5BP32019 993 aa18.63■□□□□ 0.57
C9orf3-217ENST00000479161 GTF2A2P52657 109 aa18.63■□□□□ 0.57
C9orf3-217ENST00000479161 NOM1Q5C9Z4 860 aaKnown RBP18.63■□□□□ 0.57
C9orf3-217ENST00000479161 SCYL3Q8IZE3 742 aa18.63■□□□□ 0.57
C9orf3-217ENST00000479161 LCORLQ8N3X6 602 aa18.63■□□□□ 0.57
C9orf3-217ENST00000479161 ZKSCAN4Q969J2 545 aaPredicted RBP18.63■□□□□ 0.57
C9orf3-217ENST00000479161 MS4A4AQ96JQ5 239 aa18.63■□□□□ 0.57
C9orf3-217ENST00000479161 ELP3Q9H9T3 547 aa18.63■□□□□ 0.57
C9orf3-217ENST00000479161 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.63■□□□□ 0.572e-7■■■□□ 18.7
C9orf3-217ENST00000479161 DCP1AQ9NPI6 582 aaPredicted RBP18.63■□□□□ 0.57
C9orf3-217ENST00000479161 PALD1Q9ULE6 856 aa18.63■□□□□ 0.57
C9orf3-217ENST00000479161 NAV1Q8NEY1 1877 aa18.63■□□□□ 0.57
C9orf3-217ENST00000479161 MBD4O95243 580 aa18.62■□□□□ 0.57
C9orf3-217ENST00000479161 CENPBP07199 599 aaPredicted RBP18.62■□□□□ 0.57
C9orf3-217ENST00000479161 GNAT2P19087 354 aa18.62■□□□□ 0.57
C9orf3-217ENST00000479161 GJA5P36382 358 aa18.62■□□□□ 0.57
C9orf3-217ENST00000479161 STRBPQ96SI9 672 aaKnown RBP18.62■□□□□ 0.57
C9orf3-217ENST00000479161 PUS7LQ9H0K6 701 aaKnown RBP18.62■□□□□ 0.57
C9orf3-217ENST00000479161 ZCCHC17Q9NP64 241 aaKnown RBP18.62■□□□□ 0.57
C9orf3-217ENST00000479161 PRDM10Q9NQV6 1147 aa18.62■□□□□ 0.57
C9orf3-217ENST00000479161 KCNH4Q9UQ05 1017 aa18.62■□□□□ 0.57
C9orf3-217ENST00000479161 CXCL11O14625 94 aa18.61■□□□□ 0.57
C9orf3-217ENST00000479161 FOXN1O15353 648 aa18.61■□□□□ 0.57
C9orf3-217ENST00000479161 CAP2P40123 477 aa18.61■□□□□ 0.57
C9orf3-217ENST00000479161 ZMYM1Q5SVZ6 1142 aa18.61■□□□□ 0.57
C9orf3-217ENST00000479161 OSBP2Q969R2 916 aa18.61■□□□□ 0.57
C9orf3-217ENST00000479161 FSD1Q9BTV5 496 aa18.61■□□□□ 0.57
C9orf3-217ENST00000479161 ARMT1Q9H993 441 aa18.61■□□□□ 0.57
C9orf3-217ENST00000479161 SERPINB13Q9UIV8 391 aa18.61■□□□□ 0.57
C9orf3-217ENST00000479161 PHIPQ8WWQ0 1821 aa18.6■□□□□ 0.57
C9orf3-217ENST00000479161 GABPAQ06546 454 aa18.6■□□□□ 0.57
C9orf3-217ENST00000479161 ERICH6BQ5W0A0 696 aa18.6■□□□□ 0.57
C9orf3-217ENST00000479161 OTUD7BQ6GQQ9 843 aa18.6■□□□□ 0.57
C9orf3-217ENST00000479161 TATDN1Q6P1N9 297 aa18.6■□□□□ 0.57
C9orf3-217ENST00000479161 DDRGK1Q96HY6 314 aa18.6■□□□□ 0.57
C9orf3-217ENST00000479161 PICK1Q9NRD5 415 aa18.6■□□□□ 0.57
C9orf3-217ENST00000479161 RNF186Q9NXI6 227 aa18.6■□□□□ 0.57
C9orf3-217ENST00000479161 BAZ2AQ9UIF9 1905 aaKnown RBP18.6■□□□□ 0.57
C9orf3-217ENST00000479161 ATAD5Q96QE3 1844 aa18.6■□□□□ 0.57
C9orf3-217ENST00000479161 IRF6O14896 467 aa18.59■□□□□ 0.57
C9orf3-217ENST00000479161 CETPP11597 493 aa18.59■□□□□ 0.57
C9orf3-217ENST00000479161 PTPRAP18433 802 aa18.59■□□□□ 0.57
C9orf3-217ENST00000479161 SNAPC2Q13487 334 aa18.59■□□□□ 0.57
C9orf3-217ENST00000479161 IFNL1Q8IU54 200 aa18.59■□□□□ 0.57
C9orf3-217ENST00000479161 CRACR2BQ8N4Y2 399 aaPredicted RBP18.59■□□□□ 0.57
C9orf3-217ENST00000479161 DNAJC18Q9H819 358 aa18.59■□□□□ 0.57
C9orf3-217ENST00000479161 PTPRFP10586 1907 aa18.59■□□□□ 0.57
C9orf3-217ENST00000479161 CHGBP05060 677 aa18.58■□□□□ 0.56
C9orf3-217ENST00000479161 ASNSP08243 561 aa18.58■□□□□ 0.56
C9orf3-217ENST00000479161 HSPA8P11142 646 aaKnown RBP18.58■□□□□ 0.56
C9orf3-217ENST00000479161 SLFNL1Q499Z3 407 aa18.58■□□□□ 0.56
C9orf3-217ENST00000479161 SBK1Q52WX2 424 aa18.58■□□□□ 0.56
C9orf3-217ENST00000479161 CENPQQ7L2Z9 268 aaPredicted RBP18.58■□□□□ 0.56
C9orf3-217ENST00000479161 SDR42E1Q8WUS8 393 aa18.58■□□□□ 0.56
C9orf3-217ENST00000479161 OTUD5Q96G74 571 aa18.58■□□□□ 0.56
C9orf3-217ENST00000479161 TRIM34Q9BYJ4 488 aa18.58■□□□□ 0.56
C9orf3-217ENST00000479161 HELLSQ9NRZ9 838 aa18.58■□□□□ 0.56
C9orf3-217ENST00000479161 MCM9Q9NXL9 1143 aa18.58■□□□□ 0.56
C9orf3-217ENST00000479161 AFG3L2Q9Y4W6 797 aa18.58■□□□□ 0.56
C9orf3-217ENST00000479161 SLC4A4Q9Y6R1 1079 aa18.58■□□□□ 0.56
C9orf3-217ENST00000479161 GPAA1O43292 621 aa18.57■□□□□ 0.56
C9orf3-217ENST00000479161 POLR3DP05423 398 aaPredicted RBP18.57■□□□□ 0.56
C9orf3-217ENST00000479161 PLCD1P51178 756 aa18.57■□□□□ 0.56
C9orf3-217ENST00000479161 C12orf60Q5U649 245 aa18.57■□□□□ 0.56
C9orf3-217ENST00000479161 AMOTL1Q8IY63 956 aa18.57■□□□□ 0.56
C9orf3-217ENST00000479161 CNKSR2Q8WXI2 1034 aa18.57■□□□□ 0.56
C9orf3-217ENST00000479161 SWAP70Q9UH65 585 aa18.57■□□□□ 0.56
C9orf3-217ENST00000479161 SAP30BPQ9UHR5 308 aaKnown RBP18.57■□□□□ 0.56
C9orf3-217ENST00000479161 GSG1L2A8MUP6 293 aa18.56■□□□□ 0.56
C9orf3-217ENST00000479161 PATL2C9JE40 543 aaKnown RBP18.56■□□□□ 0.56
C9orf3-217ENST00000479161 PDE4AP27815 886 aa18.56■□□□□ 0.56
C9orf3-217ENST00000479161 WDR18Q9BV38 432 aa18.56■□□□□ 0.56
C9orf3-217ENST00000479161 ARPP21Q9UBL0 812 aaPredicted RBP18.56■□□□□ 0.56
C9orf3-217ENST00000479161 HIP1O00291 1037 aa18.55■□□□□ 0.56
C9orf3-217ENST00000479161 PRKAB2O43741 272 aa18.55■□□□□ 0.56
C9orf3-217ENST00000479161 TRPA1O75762 1119 aa18.55■□□□□ 0.56
C9orf3-217ENST00000479161 NEFLP07196 543 aa18.55■□□□□ 0.56
C9orf3-217ENST00000479161 MKRN3Q13064 507 aaKnown RBP18.55■□□□□ 0.56
C9orf3-217ENST00000479161 BRI3BPQ8WY22 251 aa18.55■□□□□ 0.56
C9orf3-217ENST00000479161 PTPN18Q99952 460 aa18.55■□□□□ 0.56
C9orf3-217ENST00000479161 ZHX2Q9Y6X8 837 aa18.55■□□□□ 0.56
C9orf3-217ENST00000479161 MYH8P13535 1937 aa18.55■□□□□ 0.56
C9orf3-217ENST00000479161 CCL15-CCL14A0A0B4J2E2 113 aa18.54■□□□□ 0.56
C9orf3-217ENST00000479161 A0A0G2JLL6 359 aaPredicted RBP18.54■□□□□ 0.56
C9orf3-217ENST00000479161 FAM196BA6NMK8 535 aa18.54■□□□□ 0.56
C9orf3-217ENST00000479161 USP17L5A8MUK1 530 aa18.54■□□□□ 0.56
C9orf3-217ENST00000479161 USP17L12C9JPN9 530 aa18.54■□□□□ 0.56
C9orf3-217ENST00000479161 USP17L21D6R901 530 aa18.54■□□□□ 0.56
C9orf3-217ENST00000479161 IGF2BP3O00425 579 aaKnown RBP eCLIP18.54■□□□□ 0.56
C9orf3-217ENST00000479161 SLURP2P0DP57 97 aa18.54■□□□□ 0.56
C9orf3-217ENST00000479161 RRP1BQ14684 758 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms