RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 CRKLP46109 303 aaKnown RBP16.18■□□□□ 0.18
CCDC78-210ENST00000478979 CWC15Q9P013 229 aaKnown RBP16.18■□□□□ 0.18
CCDC78-210ENST00000478979 IFNKQ9P0W0 207 aa16.18■□□□□ 0.18
CCDC78-210ENST00000478979 JAG2Q9Y219 1238 aa16.18■□□□□ 0.18
CCDC78-210ENST00000478979 PHLPP2Q6ZVD8 1323 aa16.18■□□□□ 0.18
CCDC78-210ENST00000478979 CDHR2Q9BYE9 1310 aa16.18■□□□□ 0.18
CCDC78-210ENST00000478979 ATP8B1O43520 1251 aa16.18■□□□□ 0.18
CCDC78-210ENST00000478979 RANBP6O60518 1105 aaKnown RBP16.18■□□□□ 0.18
CCDC78-210ENST00000478979 CASQ1P31415 396 aa16.18■□□□□ 0.18
CCDC78-210ENST00000478979 GUCY1A2P33402 732 aa16.18■□□□□ 0.18
CCDC78-210ENST00000478979 IARSP41252 1262 aaKnown RBP16.18■□□□□ 0.18
CCDC78-210ENST00000478979 FBXO3Q9UK99 471 aa16.18■□□□□ 0.18
CCDC78-210ENST00000478979 ITGB4P16144 1822 aa16.18■□□□□ 0.18
CCDC78-210ENST00000478979 BCL9O00512 1426 aa16.18■□□□□ 0.18
CCDC78-210ENST00000478979 FANCGO15287 622 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 TUBB4AP04350 444 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 SLC3A2P08195 630 aaKnown RBP16.17■□□□□ 0.18
CCDC78-210ENST00000478979 LMOD1P29536 600 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-210ENST00000478979 EVCP57679 992 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 MAP3K12Q12852 859 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 CC2D1AQ6P1N0 951 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-210ENST00000478979 REXO1L1PQ8IX06 675 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 SLC12A7Q9Y666 1083 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 BAZ2BQ9UIF8 2168 aaKnown RBP16.17■□□□□ 0.18
CCDC78-210ENST00000478979 EFCAB8A8MWE9 144 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 KCNJ6P48051 423 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 NAT10Q9H0A0 1025 aaKnown RBP16.17■□□□□ 0.18
CCDC78-210ENST00000478979 PAPPAQ13219 1627 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 ZMYM6O95789 1325 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 KCNQ2O43526 872 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 NRDCO43847 1150 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 GYG1P46976 350 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 TRIM29Q14134 588 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 SRLQ86TD4 932 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 RGS22Q8NE09 1264 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 KCNG4Q8TDN1 519 aa16.17■□□□□ 0.18
CCDC78-210ENST00000478979 MYH15Q9Y2K3 1946 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 TCRBV5S4A2TA0A5A2 114 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 PRDM1O75626 825 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 LMAN1P49257 510 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 UTP14AQ9BVJ6 771 aaKnown RBP16.16■□□□□ 0.18
CCDC78-210ENST00000478979 MYH7P12883 1935 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 CYP2D7A0A087X1C5 515 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 UBE3CQ15386 1083 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 TRIM65Q6PJ69 517 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 CPLX2Q6PUV4 134 aaKnown RBP16.16■□□□□ 0.18
CCDC78-210ENST00000478979 GOLGA5Q8TBA6 731 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 AK7Q96M32 723 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 SRRTQ9BXP5 876 aaKnown RBP16.16■□□□□ 0.18
CCDC78-210ENST00000478979 LY9Q9HBG7 655 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 RAI14Q9P0K7 980 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 KIAA1468Q9P260 1216 aa16.16■□□□□ 0.18
CCDC78-210ENST00000478979 IL6STP40189 918 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-210ENST00000478979 PNOCQ13519 176 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 DDB1Q16531 1140 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 MFSD6Q6ZSS7 791 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 ZNF34Q8IZ26 560 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 RRP15Q9Y3B9 282 aaKnown RBP16.15■□□□□ 0.18
CCDC78-210ENST00000478979 TPM1P09493 284 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 UQCRFS1P1P0C7P4 283 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 IGHMBP2P38935 993 aaKnown RBP16.15■□□□□ 0.18
CCDC78-210ENST00000478979 ITPK1Q13572 414 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 IGDCC4Q8TDY8 1250 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 NUP98P52948 1817 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 BTBD18B2RXH4 712 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 ARID4AP29374 1257 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-210ENST00000478979 PDILTQ8N807 584 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 CCDC87Q9NVE4 849 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 POLR3EQ9NVU0 708 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 ADAM21Q9UKJ8 722 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 PARP3Q9Y6F1 533 aa16.15■□□□□ 0.18
CCDC78-210ENST00000478979 ATP1A3P13637 1013 aa16.14■□□□□ 0.17
CCDC78-210ENST00000478979 SYKP43405 635 aa16.14■□□□□ 0.17
CCDC78-210ENST00000478979 CHRNDQ07001 517 aa16.14■□□□□ 0.17
CCDC78-210ENST00000478979 INTS5Q6P9B9 1019 aaKnown RBP16.14■□□□□ 0.17
CCDC78-210ENST00000478979 BRAPQ7Z569 592 aa16.14■□□□□ 0.17
CCDC78-210ENST00000478979 ADGRA1Q86SQ6 560 aa16.14■□□□□ 0.17
CCDC78-210ENST00000478979 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.14■□□□□ 0.17
CCDC78-210ENST00000478979 GSG1L2A8MUP6 293 aa16.14■□□□□ 0.17
CCDC78-210ENST00000478979 PATL2C9JE40 543 aaKnown RBP16.14■□□□□ 0.17
CCDC78-210ENST00000478979 FOXN1O15353 648 aa16.14■□□□□ 0.17
CCDC78-210ENST00000478979 CYP7A1P22680 504 aa16.14■□□□□ 0.17
CCDC78-210ENST00000478979 ABCA3Q99758 1704 aa16.14■□□□□ 0.17
CCDC78-210ENST00000478979 LOC102724428A0A0B4J2F2 783 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 GTF2A1P52655 376 aaPredicted RBP16.13■□□□□ 0.17
CCDC78-210ENST00000478979 SIK1P57059 783 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 GRIN1Q05586 938 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 GOLGA8FQ08AF8 430 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 GOLGA8DPQ0D2H9 430 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 AXDND1Q5T1B0 1012 aaPredicted RBP16.13■□□□□ 0.17
CCDC78-210ENST00000478979 C3orf67Q6ZVT6 689 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 FAM217BQ9NTX9 383 aaPredicted RBP16.13■□□□□ 0.17
CCDC78-210ENST00000478979 PLEKHG2Q9H7P9 1386 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 MROH5Q6ZUA9 1318 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 KDM4FA0A1W2PPD8 638 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 YEATS4O95619 227 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 FGFR2P21802 821 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 SSRP1Q08945 709 aaKnown RBP16.13■□□□□ 0.17
CCDC78-210ENST00000478979 NR5A1Q13285 461 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 EXOC4Q96A65 974 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms