RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 ITPK1Q13572 414 aa8.39□□□□□ -1.07
HOXB3-209ENST00000478644 SUZ12Q15022 739 aaKnown RBP8.39□□□□□ -1.07
HOXB3-209ENST00000478644 SWI5Q1ZZU3 235 aa8.39□□□□□ -1.07
HOXB3-209ENST00000478644 MSL1Q68DK7 614 aa8.39□□□□□ -1.07
HOXB3-209ENST00000478644 NLGN2Q8NFZ4 835 aa8.39□□□□□ -1.07
HOXB3-209ENST00000478644 SLC52A2Q9HAB3 445 aa8.39□□□□□ -1.07
HOXB3-209ENST00000478644 STARD13Q9Y3M8 1113 aa8.39□□□□□ -1.07
HOXB3-209ENST00000478644 TOGARAM1Q9Y4F4 1720 aa8.39□□□□□ -1.07
HOXB3-209ENST00000478644 UBR3Q6ZT12 1888 aa8.38□□□□□ -1.07
HOXB3-209ENST00000478644 STARD3NLO95772 234 aa8.38□□□□□ -1.07
HOXB3-209ENST00000478644 MMP10P09238 476 aa8.38□□□□□ -1.07
HOXB3-209ENST00000478644 COL9A3Q14050 684 aaPredicted RBP8.38□□□□□ -1.07
HOXB3-209ENST00000478644 TTC5Q8N0Z6 440 aa8.38□□□□□ -1.07
HOXB3-209ENST00000478644 TRIM11Q96F44 468 aa8.38□□□□□ -1.07
HOXB3-209ENST00000478644 GSX2Q9BZM3 304 aa8.38□□□□□ -1.07
HOXB3-209ENST00000478644 NOVA2Q9UNW9 492 aaKnown RBP8.38□□□□□ -1.07
HOXB3-209ENST00000478644 CICQ96RK0 1608 aaPredicted RBP8.37□□□□□ -1.07
HOXB3-209ENST00000478644 LGR5O75473 907 aa8.37□□□□□ -1.07
HOXB3-209ENST00000478644 INPP5BP32019 993 aa8.37□□□□□ -1.07
HOXB3-209ENST00000478644 CRKLP46109 303 aaKnown RBP8.37□□□□□ -1.07
HOXB3-209ENST00000478644 PNNQ9H307 717 aaKnown RBP8.37□□□□□ -1.07
HOXB3-209ENST00000478644 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.37□□□□□ -1.07
HOXB3-209ENST00000478644 GNAT3A8MTJ3 354 aa8.36□□□□□ -1.07
HOXB3-209ENST00000478644 RNMTO43148 476 aaKnown RBP8.36□□□□□ -1.07
HOXB3-209ENST00000478644 PTCD1O75127 700 aaKnown RBP8.36□□□□□ -1.07
HOXB3-209ENST00000478644 ATG7O95352 703 aa8.36□□□□□ -1.07
HOXB3-209ENST00000478644 NEFMP07197 916 aa8.36□□□□□ -1.07
HOXB3-209ENST00000478644 GYS1P13807 737 aa8.36□□□□□ -1.07
HOXB3-209ENST00000478644 YBX3P16989 372 aaKnown RBP eCLIP8.36□□□□□ -1.07
HOXB3-209ENST00000478644 GRNP28799 593 aaKnown RBP8.36□□□□□ -1.07
HOXB3-209ENST00000478644 TEFQ10587 303 aa8.36□□□□□ -1.07
HOXB3-209ENST00000478644 C11orf91Q3C1V1 193 aa8.36□□□□□ -1.07
HOXB3-209ENST00000478644 C20orf204Q6ZNR8 217 aa8.36□□□□□ -1.07
HOXB3-209ENST00000478644 MICALL1Q8N3F8 863 aa8.36□□□□□ -1.07
HOXB3-209ENST00000478644 PIM2Q9P1W9 311 aa8.36□□□□□ -1.07
HOXB3-209ENST00000478644 ZMIZ1Q9ULJ6 1067 aa8.36□□□□□ -1.07
HOXB3-209ENST00000478644 KDM6AO15550 1401 aaPredicted RBP8.36□□□□□ -1.07
HOXB3-209ENST00000478644 HTATSF1O43719 755 aaKnown RBP8.35□□□□□ -1.07
HOXB3-209ENST00000478644 ADH7P40394 386 aa8.35□□□□□ -1.07
HOXB3-209ENST00000478644 AEBP1Q8IUX7 1158 aa8.35□□□□□ -1.07
HOXB3-209ENST00000478644 CCDC82Q8N4S0 544 aa8.35□□□□□ -1.07
HOXB3-209ENST00000478644 PLVAPQ9BX97 442 aa8.35□□□□□ -1.07
HOXB3-209ENST00000478644 NARFQ9UHQ1 456 aa8.35□□□□□ -1.07
HOXB3-209ENST00000478644 UTRNP46939 3433 aa8.35□□□□□ -1.07
HOXB3-209ENST00000478644 USP42Q9H9J4 1324 aaKnown RBP8.34□□□□□ -1.07
HOXB3-209ENST00000478644 CCINQ13939 588 aa8.34□□□□□ -1.07
HOXB3-209ENST00000478644 OCLNQ16625 522 aa8.34□□□□□ -1.07
HOXB3-209ENST00000478644 MTHFSDQ2M296 383 aaKnown RBP8.34□□□□□ -1.07
HOXB3-209ENST00000478644 DALRD3Q5D0E6 543 aaKnown RBP8.34□□□□□ -1.07
HOXB3-209ENST00000478644 CC2D1BQ5T0F9 858 aaKnown RBP8.34□□□□□ -1.07
HOXB3-209ENST00000478644 RAB44Q7Z6P3 723 aaPredicted RBP8.34□□□□□ -1.07
HOXB3-209ENST00000478644 COL26A1Q96A83 441 aa8.34□□□□□ -1.07
HOXB3-209ENST00000478644 TRAIPQ9BWF2 469 aa8.34□□□□□ -1.07
HOXB3-209ENST00000478644 KLK14Q9P0G3 267 aa8.34□□□□□ -1.07
HOXB3-209ENST00000478644 COL5A3P25940 1745 aaPredicted RBP8.34□□□□□ -1.07
HOXB3-209ENST00000478644 MRC1P22897 1456 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 SCN11AQ9UI33 1791 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 LOC100996750A0A140TA64 210 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 M0R082 166 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 MAP3K6O95382 1288 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 ALBP02768 609 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 CYP19A1P11511 503 aaPredicted RBP8.33□□□□□ -1.08
HOXB3-209ENST00000478644 EPB42P16452 691 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 TM4SF1P30408 202 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 DGKZQ13574 1117 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 C10orf71Q711Q0 1435 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 ZNF417Q8TAU3 575 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 RTF1Q92541 710 aaKnown RBP8.33□□□□□ -1.08
HOXB3-209ENST00000478644 BHMTQ93088 406 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 FMNL2Q96PY5 1086 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 ZNF587Q96SQ5 575 aaPredicted RBP8.33□□□□□ -1.08
HOXB3-209ENST00000478644 KRTAP4-6Q9BYQ5 205 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 LRFN2Q9ULH4 789 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 KIF13BQ9NQT8 1826 aa8.33□□□□□ -1.08
HOXB3-209ENST00000478644 SOS1Q07889 1333 aaPredicted RBP8.32□□□□□ -1.08
HOXB3-209ENST00000478644 ATP10DQ9P241 1426 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 SPDYE3A6NKU9 549 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 C1QTNF9BB2RNN3 333 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 U2SURPO15042 1029 aaKnown RBP8.32□□□□□ -1.08
HOXB3-209ENST00000478644 MICAL2O94851 1124 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 HMOX1P09601 288 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 SPATA31C1P0DKV0 1188 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 IL6STP40189 918 aaPredicted RBP8.32□□□□□ -1.08
HOXB3-209ENST00000478644 IDH3AP50213 366 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 FKBP5Q13451 457 aaPredicted RBP8.32□□□□□ -1.08
HOXB3-209ENST00000478644 INTS5Q6P9B9 1019 aaKnown RBP8.32□□□□□ -1.08
HOXB3-209ENST00000478644 ZNF790Q6PG37 636 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 CD163Q86VB7 1156 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 AMIGO3Q86WK7 504 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 PNISRQ8TF01 805 aaKnown RBP8.32□□□□□ -1.08
HOXB3-209ENST00000478644 VTI1AQ96AJ9 217 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 LGR6Q9HBX8 967 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.32□□□□□ -1.08
HOXB3-209ENST00000478644 ADCY9O60503 1353 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 C4AP0C0L4 1744 aa8.32□□□□□ -1.08
HOXB3-209ENST00000478644 KDM2BQ8NHM5 1336 aa8.31□□□□□ -1.08
HOXB3-209ENST00000478644 OPLAHO14841 1288 aa8.31□□□□□ -1.08
HOXB3-209ENST00000478644 NID1P14543 1247 aa8.31□□□□□ -1.08
HOXB3-209ENST00000478644 PDE6BP35913 854 aa8.31□□□□□ -1.08
HOXB3-209ENST00000478644 ARSDP51689 593 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms