RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	DDX60L	Q5H9U9	1706 aa	Known RBP	11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	STK36	Q9NRP7	1315 aa		11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	KLF18	A0A0U1RQI7	1052 aa		11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	FIBP	O43427	364 aa		11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	PRKAB2	O43741	272 aa		11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	VIL1	P09327	827 aa	Known RBP	11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	GMPS	P49915	693 aa	Predicted RBP	11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	CHAF1A	Q13111	956 aa	Predicted RBP	11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	NTRK3	Q16288	839 aa		11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	RBM43	Q6ZSC3	357 aa	Known RBP	11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	LEO1	Q8WVC0	666 aa	Predicted RBP	11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	PDLIM2	Q96JY6	352 aa		11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	RNF41	Q9H4P4	317 aa	Predicted RBP	11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	RRAGC	Q9HB90	399 aa		11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	NCOA5	Q9HCD5	579 aa	Known RBP	11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	RCOR1	Q9UKL0	485 aa		11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.18	□□□□□ -0.62
ATG7-223	ENST00000478638	MAGEB6P1	A0A0J9YX57	407 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	IQCA1L	A6NCM1	817 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	GOLGA8B	A8MQT2	603 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638		B4E1Z4	1266 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	VEGFA	P15692	232 aa	Predicted RBP	11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	RPS12	P25398	132 aa	Known RBP	11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	SBK1	Q52WX2	424 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	CHST3	Q7LGC8	479 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	FAM184A	Q8NB25	1140 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	AGBL3	Q8NEM8	1001 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	FBXO18	Q8NFZ0	1043 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	DPF2	Q92785	391 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	RBSN	Q9H1K0	784 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	ZSWIM5	Q9P217	1185 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	HACL1	Q9UJ83	578 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	SLC4A4	Q9Y6R1	1079 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	CDK5RAP2	Q96SN8	1893 aa		11.17	□□□□□ -0.62
ATG7-223	ENST00000478638	MYH2	Q9UKX2	1941 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	SYCE3	A1L190	88 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638		H7C1D1	291 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	DTNB	O60941	627 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	NASP	P49321	788 aa	Predicted RBP	11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	CCT2	P78371	535 aa	Known RBP	11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	PPARA	Q07869	468 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	PPP2R5B	Q15173	497 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	SEC23A	Q15436	765 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	FERMT3	Q86UX7	667 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	TMTC2	Q8N394	836 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	TBC1D22A	Q8WUA7	517 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	DDX11	Q96FC9	970 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	PGBD1	Q96JS3	809 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	MKRN1	Q9UHC7	482 aa	Known RBP	11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	CNOT7	Q9UIV1	285 aa	Known RBP	11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	CFAP45	Q9UL16	551 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	JAG2	Q9Y219	1238 aa		11.16	□□□□□ -0.62
ATG7-223	ENST00000478638	MYO3B	Q8WXR4	1341 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	FOCAD	Q5VW36	1801 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638		H3BQV1	296 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	ORC4	O43929	436 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	CDKL5	O76039	1030 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	APP	P05067	770 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	IFNAR1	P17181	557 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	EPS15	P42566	896 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	PPP4C	P60510	307 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	MECOM	Q03112	1051 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	UVSSA	Q2YD98	709 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	MFSD14B	Q5SR56	506 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	DACT2	Q5SW24	774 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	IFFO2	Q5TF58	517 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	FAM173B	Q6P4H8	233 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	MFSD6	Q6ZSS7	791 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	OGFOD1	Q8N543	542 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	WDR66	Q8TBY9	1149 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	MXD3	Q9BW11	206 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	NMRK2	Q9NPI5	230 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	ATP8A2	Q9NTI2	1148 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	RAI14	Q9P0K7	980 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	ORC3	Q9UBD5	711 aa	Predicted RBP	11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	HDAC9	Q9UKV0	1011 aa		11.15	□□□□□ -0.62
ATG7-223	ENST00000478638	ROBO3	Q96MS0	1386 aa		11.15	□□□□□ -0.63
ATG7-223	ENST00000478638	FER1L6	Q2WGJ9	1857 aa		11.15	□□□□□ -0.63
ATG7-223	ENST00000478638	FAM205A	Q6ZU69	1335 aa		11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	KDM4A	O75164	1064 aa		11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	USP17L8	P0C7I0	530 aa		11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	CDC27	P30260	824 aa		11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	TDO2	P48775	406 aa		11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	FKBP1A	P62942	108 aa	Known RBP	11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	CTDSPL2	Q05D32	466 aa		11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	CCDC173	Q0VFZ6	552 aa		11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	TMEM67	Q5HYA8	995 aa		11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	BRAP	Q7Z569	592 aa		11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	CERS3	Q8IU89	383 aa		11.14	□□□□□ -0.63
ATG7-223	ENST00000478638	MICALL2	Q8IY33	904 aa		11.14	□□□□□ -0.63

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