RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 CRISPLD2Q9H0B8 497 aa11.95□□□□□ -0.5
CCM2-210ENST00000478169 COL2A1P02458 1487 aaPredicted RBP11.95□□□□□ -0.5
CCM2-210ENST00000478169 GCLCP48506 637 aaPredicted RBP11.94□□□□□ -0.5
CCM2-210ENST00000478169 GSTO1P78417 241 aa11.94□□□□□ -0.5
CCM2-210ENST00000478169 PABPC4Q13310 644 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCM2-210ENST00000478169 TREML2Q5T2D2 321 aa11.94□□□□□ -0.5
CCM2-210ENST00000478169 CDCA7LQ96GN5 454 aa11.94□□□□□ -0.5
CCM2-210ENST00000478169 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCM2-210ENST00000478169 SRGAP3O43295 1099 aa11.93□□□□□ -0.5
CCM2-210ENST00000478169 GNAI3P08754 354 aa11.93□□□□□ -0.5
CCM2-210ENST00000478169 SLURP2P0DP57 97 aa11.93□□□□□ -0.5
CCM2-210ENST00000478169 TFCP2Q12800 502 aa11.93□□□□□ -0.5
CCM2-210ENST00000478169 SPP2Q13103 211 aa11.93□□□□□ -0.5
CCM2-210ENST00000478169 MTX1Q13505 466 aa11.93□□□□□ -0.5
CCM2-210ENST00000478169 ANKLE1Q8NAG6 615 aa11.93□□□□□ -0.5
CCM2-210ENST00000478169 ZNF280CQ8ND82 737 aa11.93□□□□□ -0.5
CCM2-210ENST00000478169 ZNF384Q8TF68 577 aa11.93□□□□□ -0.5
CCM2-210ENST00000478169 MEIS3Q99687 375 aa11.93□□□□□ -0.5
CCM2-210ENST00000478169 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.93□□□□□ -0.5
CCM2-210ENST00000478169 CDK5RAP2Q96SN8 1893 aa11.92□□□□□ -0.5
CCM2-210ENST00000478169 HMGCRP04035 888 aa11.92□□□□□ -0.5
CCM2-210ENST00000478169 CAP2P40123 477 aa11.92□□□□□ -0.5
CCM2-210ENST00000478169 SH3D19Q5HYK7 790 aa11.92□□□□□ -0.5
CCM2-210ENST00000478169 NECAB2Q7Z6G3 386 aa11.92□□□□□ -0.5
CCM2-210ENST00000478169 CCDC84Q86UT8 332 aaPredicted RBP11.92□□□□□ -0.5
CCM2-210ENST00000478169 SPATA5Q8NB90 893 aa11.92□□□□□ -0.5
CCM2-210ENST00000478169 ARHGAP45Q92619 1136 aa11.92□□□□□ -0.5
CCM2-210ENST00000478169 NSUN4Q96CB9 384 aaKnown RBP11.92□□□□□ -0.5
CCM2-210ENST00000478169 PAWRQ96IZ0 340 aaKnown RBP11.92□□□□□ -0.5
CCM2-210ENST00000478169 NEUROD6Q96NK8 337 aa11.92□□□□□ -0.5
CCM2-210ENST00000478169 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCM2-210ENST00000478169 HMG20BQ9P0W2 317 aa11.92□□□□□ -0.5
CCM2-210ENST00000478169 HERC5Q9UII4 1024 aaKnown RBP11.92□□□□□ -0.5
CCM2-210ENST00000478169 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
CCM2-210ENST00000478169 PLXNB2O15031 1838 aa11.92□□□□□ -0.5
CCM2-210ENST00000478169 USP17L5A8MUK1 530 aa11.91□□□□□ -0.5
CCM2-210ENST00000478169 HMGCS2P54868 508 aa11.91□□□□□ -0.5
CCM2-210ENST00000478169 GORABQ5T7V8 394 aa11.91□□□□□ -0.5
CCM2-210ENST00000478169 ASCC2Q9H1I8 757 aaPredicted RBP11.91□□□□□ -0.5
CCM2-210ENST00000478169 AS3MTQ9HBK9 375 aa11.91□□□□□ -0.5
CCM2-210ENST00000478169 GJD2Q9UKL4 321 aa11.91□□□□□ -0.5
CCM2-210ENST00000478169 FOCADQ5VW36 1801 aa11.9□□□□□ -0.5
CCM2-210ENST00000478169 RPTORQ8N122 1335 aa11.9□□□□□ -0.5
CCM2-210ENST00000478169 FAM196BA6NMK8 535 aa11.9□□□□□ -0.5
CCM2-210ENST00000478169 ARID4AP29374 1257 aaPredicted RBP11.9□□□□□ -0.5
CCM2-210ENST00000478169 BMP8BP34820 402 aa11.9□□□□□ -0.5
CCM2-210ENST00000478169 TBC1D9Q6ZT07 1266 aa11.9□□□□□ -0.5
CCM2-210ENST00000478169 WDR18Q9BV38 432 aa11.9□□□□□ -0.5
CCM2-210ENST00000478169 DHX36Q9H2U1 1008 aaKnown RBP11.9□□□□□ -0.5
CCM2-210ENST00000478169 RAI14Q9P0K7 980 aa11.9□□□□□ -0.5
CCM2-210ENST00000478169 PI4KBQ9UBF8 816 aa11.9□□□□□ -0.5
CCM2-210ENST00000478169 MORF4L1Q9UBU8 362 aa11.9□□□□□ -0.5
CCM2-210ENST00000478169 STAP2Q9UGK3 403 aa11.9□□□□□ -0.5
CCM2-210ENST00000478169 SIPA1L1O43166 1804 aa11.9□□□□□ -0.5
CCM2-210ENST00000478169 MYO5AQ9Y4I1 1855 aaKnown RBP11.89□□□□□ -0.51
CCM2-210ENST00000478169 DDX60LQ5H9U9 1706 aaKnown RBP11.89□□□□□ -0.51
CCM2-210ENST00000478169 UQCRFS1P1P0C7P4 283 aa11.89□□□□□ -0.51
CCM2-210ENST00000478169 HOXA7P31268 230 aaPredicted RBP11.89□□□□□ -0.51
CCM2-210ENST00000478169 RRP1BQ14684 758 aaKnown RBP11.89□□□□□ -0.51
CCM2-210ENST00000478169 PI16Q6UXB8 463 aa11.89□□□□□ -0.51
CCM2-210ENST00000478169 TEX11Q8IYF3 940 aa11.89□□□□□ -0.51
CCM2-210ENST00000478169 DIS3LQ8TF46 1054 aaKnown RBP11.89□□□□□ -0.51
CCM2-210ENST00000478169 GDF15Q99988 308 aa11.89□□□□□ -0.51
CCM2-210ENST00000478169 NOL10Q9BSC4 688 aaKnown RBP11.89□□□□□ -0.51
CCM2-210ENST00000478169 NBPF3Q9H094 633 aa11.89□□□□□ -0.51
CCM2-210ENST00000478169 HMX1Q9NP08 348 aaPredicted RBP11.89□□□□□ -0.51
CCM2-210ENST00000478169 LRP2BPQ9P2M1 347 aa11.89□□□□□ -0.51
CCM2-210ENST00000478169 C19orf81C9J6K1 198 aa11.88□□□□□ -0.51
CCM2-210ENST00000478169 SOX1O00570 391 aaPredicted RBP11.88□□□□□ -0.51
CCM2-210ENST00000478169 IGSF3O75054 1194 aa11.88□□□□□ -0.51
CCM2-210ENST00000478169 BAG3O95817 575 aa11.88□□□□□ -0.51
CCM2-210ENST00000478169 ASNSP08243 561 aa11.88□□□□□ -0.51
CCM2-210ENST00000478169 PLCG2P16885 1265 aa11.88□□□□□ -0.51
CCM2-210ENST00000478169 MCAMP43121 646 aa11.88□□□□□ -0.51
CCM2-210ENST00000478169 RARSP54136 660 aaKnown RBP11.88□□□□□ -0.51
CCM2-210ENST00000478169 BACE1P56817 501 aa11.88□□□□□ -0.51
CCM2-210ENST00000478169 G3BP1Q13283 466 aaKnown RBP eCLIP11.88□□□□□ -0.51
CCM2-210ENST00000478169 GPR153Q6NV75 609 aa11.88□□□□□ -0.51
CCM2-210ENST00000478169 FOXP4Q8IVH2 680 aaPredicted RBP11.88□□□□□ -0.51
CCM2-210ENST00000478169 SLC17A8Q8NDX2 589 aa11.88□□□□□ -0.51
CCM2-210ENST00000478169 GINM1Q9NU53 330 aa11.88□□□□□ -0.51
CCM2-210ENST00000478169 TMOD4Q9NZQ9 345 aa11.88□□□□□ -0.51
CCM2-210ENST00000478169 OGDHLQ9ULD0 1010 aa11.88□□□□□ -0.51
CCM2-210ENST00000478169 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.88□□□□□ -0.51
CCM2-210ENST00000478169 MAST2Q6P0Q8 1798 aa11.87□□□□□ -0.51
CCM2-210ENST00000478169 IPO8O15397 1037 aaKnown RBP11.87□□□□□ -0.51
CCM2-210ENST00000478169 GNAI2P04899 355 aa11.87□□□□□ -0.51
CCM2-210ENST00000478169 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
CCM2-210ENST00000478169 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
CCM2-210ENST00000478169 PPP4CP60510 307 aa11.87□□□□□ -0.51
CCM2-210ENST00000478169 IRX3P78415 501 aaPredicted RBP11.87□□□□□ -0.51
CCM2-210ENST00000478169 MTMR2Q13614 643 aa11.87□□□□□ -0.51
CCM2-210ENST00000478169 METTL16Q86W50 562 aaKnown RBP11.87□□□□□ -0.51
CCM2-210ENST00000478169 TRMT44Q8IYL2 757 aaKnown RBP11.87□□□□□ -0.51
CCM2-210ENST00000478169 GPRC5AQ8NFJ5 357 aa11.87□□□□□ -0.51
CCM2-210ENST00000478169 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
CCM2-210ENST00000478169 NUDT12Q9BQG2 462 aa11.87□□□□□ -0.51
CCM2-210ENST00000478169 C11orf49Q9H6J7 331 aa11.87□□□□□ -0.51
CCM2-210ENST00000478169 MYH1P12882 1939 aa11.87□□□□□ -0.51
CCM2-210ENST00000478169 USP17L10C9JJH3 530 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms