RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SDSP20132 328 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 NRG1Q02297 640 aaPredicted RBP6.03□□□□□ -1.44
SF3B6-202ENST00000478050 ADGRE1Q14246 886 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 RAB3GAP1Q15042 981 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 TAF7Q15545 349 aaPredicted RBP6.03□□□□□ -1.44
SF3B6-202ENST00000478050 SKOR2Q2VWA4 1001 aaPredicted RBP6.03□□□□□ -1.44
SF3B6-202ENST00000478050 SLC4A10Q6U841 1118 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 G2E3Q7L622 706 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 TXNRD3Q86VQ6 643 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 ABTB2Q8N961 1025 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 JMYQ8N9B5 988 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 TP53INP1Q96A56 240 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 MDFIQ99750 246 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 KRTAP4-2Q9BYR5 136 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 MIS18AQ9NYP9 233 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 STARD13Q9Y3M8 1113 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 PARP3Q9Y6F1 533 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 ADAMTS7Q9UKP4 1686 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 SLIT2O94813 1529 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 RGPD5Q99666 1765 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 GOLGA6L3A6NEY3 463 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 F6X3S4 739 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 ERC2O15083 957 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 HOXB7P09629 217 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 RFX1P22670 979 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 ADH7P40394 386 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 RAC1P63000 192 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 ATP8B2P98198 1209 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 FKBP5Q13451 457 aaPredicted RBP6.02□□□□□ -1.45
SF3B6-202ENST00000478050 IRF5Q13568 498 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 COL9A3Q14050 684 aaPredicted RBP6.02□□□□□ -1.45
SF3B6-202ENST00000478050 MBTPS1Q14703 1052 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 LRRC69Q6ZNQ3 347 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 FAM196AQ6ZSG2 479 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 C16orf71Q8IYS4 520 aaPredicted RBP6.02□□□□□ -1.45
SF3B6-202ENST00000478050 KCNH5Q8NCM2 988 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 IL17REQ8NFR9 667 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 ZNF526Q8TF50 670 aaPredicted RBP6.02□□□□□ -1.45
SF3B6-202ENST00000478050 IP6K1Q92551 441 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 USP26Q9BXU7 913 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 SRCIN1Q9C0H9 1055 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 BRPF3Q9ULD4 1205 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 SCN11AQ9UI33 1791 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 COL22A1Q8NFW1 1626 aaPredicted RBP6.02□□□□□ -1.45
SF3B6-202ENST00000478050 CEMIPQ8WUJ3 1361 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 IBTKQ9P2D0 1353 aaPredicted RBP6.02□□□□□ -1.45
SF3B6-202ENST00000478050 CRYBG1Q9Y4K1 1723 aa6.02□□□□□ -1.45
SF3B6-202ENST00000478050 AOX1Q06278 1338 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 FSD2A1L4K1 749 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 GOLGA6L22H0YM25 854 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 SMARCA5O60264 1052 aaPredicted RBP6.01□□□□□ -1.45
SF3B6-202ENST00000478050 GRIN3BO60391 1043 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 LILRB5O75023 590 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 NID1P14543 1247 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 ELNP15502 786 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 PDE1AP54750 535 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 NUCB2P80303 420 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 MLLT1Q03111 559 aaPredicted RBP6.01□□□□□ -1.45
SF3B6-202ENST00000478050 CLEC17AQ6ZS10 378 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 OTUD7AQ8TE49 926 aaPredicted RBP6.01□□□□□ -1.45
SF3B6-202ENST00000478050 TNPO1Q92973 898 aaKnown RBP6.01□□□□□ -1.45
SF3B6-202ENST00000478050 TNFRSF25Q93038 417 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 SLC4A9Q96Q91 983 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 LRRCC1Q9C099 1032 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 TNS1Q9HBL0 1735 aaKnown RBP6.01□□□□□ -1.45
SF3B6-202ENST00000478050 ALS2Q96Q42 1657 aa6.01□□□□□ -1.45
SF3B6-202ENST00000478050 SALL3Q9BXA9 1300 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 PAX4O43316 350 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 EPB41L2O43491 1005 aaKnown RBP6□□□□□ -1.45
SF3B6-202ENST00000478050 RAB11FIP3O75154 756 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 UBTFL1P0CB47 393 aaPredicted RBP6□□□□□ -1.45
SF3B6-202ENST00000478050 SELPP16109 830 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 MCCP23508 829 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 MRE11P49959 708 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 SFSWAPQ12872 951 aaKnown RBP6□□□□□ -1.45
SF3B6-202ENST00000478050 MTFR1Q15390 333 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 MAP7D1Q3KQU3 841 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 HDGFL1Q5TGJ6 251 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 NUTM2GQ5VZR2 741 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 MCTP1Q6DN14 999 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 ZNF295-AS1Q8N0V1 137 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 FAM43AQ8N2R8 423 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 LENG1Q96BZ8 264 aaPredicted RBP6□□□□□ -1.45
SF3B6-202ENST00000478050 LTV1Q96GA3 475 aaPredicted RBP6□□□□□ -1.45
SF3B6-202ENST00000478050 SLC30A3Q99726 388 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 CWC22Q9HCG8 908 aaKnown RBP6□□□□□ -1.45
SF3B6-202ENST00000478050 STAP2Q9UGK3 403 aa6□□□□□ -1.45
SF3B6-202ENST00000478050 IQSEC3Q9UPP2 1182 aaPredicted RBP6□□□□□ -1.45
SF3B6-202ENST00000478050 ABCC6O95255 1503 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 NUP188Q5SRE5 1749 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 RREB1Q92766 1687 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.99□□□□□ -1.45
SF3B6-202ENST00000478050 A0A0A0MRY4 1105 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 COBLO75128 1261 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 HSPA1AP0DMV8 641 aaKnown RBP5.99□□□□□ -1.45
SF3B6-202ENST00000478050 HSPA1BP0DMV9 641 aaKnown RBP5.99□□□□□ -1.45
SF3B6-202ENST00000478050 MX1P20591 662 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 TXLNAP40222 546 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 TXKP42681 527 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms