RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 ADD2P35612 726 aa27.54■■■□□ 2
TRAF4-211ENST00000478021 SNAPC2Q13487 334 aa27.54■■■□□ 2
TRAF4-211ENST00000478021 NAV1Q8NEY1 1877 aa27.54■■■□□ 2
TRAF4-211ENST00000478021 ZNF296Q8WUU4 475 aaPredicted RBP27.54■■■□□ 2
TRAF4-211ENST00000478021 CFHR5Q9BXR6 569 aa27.54■■■□□ 2
TRAF4-211ENST00000478021 DHX36Q9H2U1 1008 aaKnown RBP27.54■■■□□ 2
TRAF4-211ENST00000478021 PICK1Q9NRD5 415 aa27.54■■■□□ 2
TRAF4-211ENST00000478021 GPR25O00155 361 aa27.53■■■□□ 2
TRAF4-211ENST00000478021 CTNND1O60716 968 aaKnown RBP27.53■■■□□ 2
TRAF4-211ENST00000478021 CETPP11597 493 aa27.53■■■□□ 2
TRAF4-211ENST00000478021 AAMPQ13685 434 aa27.53■■■□□ 2
TRAF4-211ENST00000478021 ANKRD45Q5TZF3 282 aa27.53■■■□□ 2
TRAF4-211ENST00000478021 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.53■■■□□ 2
TRAF4-211ENST00000478021 PI4KBQ9UBF8 816 aa27.53■■■□□ 2
TRAF4-211ENST00000478021 PHIPQ8WWQ0 1821 aa27.53■■■□□ 2
TRAF4-211ENST00000478021 PTPRAP18433 802 aa27.52■■■□□ 2
TRAF4-211ENST00000478021 CCDC84Q86UT8 332 aaPredicted RBP27.52■■■□□ 2
TRAF4-211ENST00000478021 FAM43AQ8N2R8 423 aa27.52■■■□□ 2
TRAF4-211ENST00000478021 LCORLQ8N3X6 602 aa27.52■■■□□ 2
TRAF4-211ENST00000478021 DDX60LQ5H9U9 1706 aaKnown RBP27.51■■□□□ 1.99
TRAF4-211ENST00000478021 IRX6P78412 446 aaPredicted RBP27.51■■□□□ 1.99
TRAF4-211ENST00000478021 CRHR2Q13324 411 aa27.51■■□□□ 1.99
TRAF4-211ENST00000478021 DGKZQ13574 1117 aa27.51■■□□□ 1.99
TRAF4-211ENST00000478021 RRP1BQ14684 758 aaKnown RBP27.51■■□□□ 1.99
TRAF4-211ENST00000478021 GCC1Q96CN9 775 aa27.51■■□□□ 1.99
TRAF4-211ENST00000478021 ZBTB47Q9UFB7 747 aaPredicted RBP27.51■■□□□ 1.99
TRAF4-211ENST00000478021 HERC5Q9UII4 1024 aaKnown RBP27.51■■□□□ 1.99
TRAF4-211ENST00000478021 KCNH4Q9UQ05 1017 aa27.51■■□□□ 1.99
TRAF4-211ENST00000478021 ZHX2Q9Y6X8 837 aa27.51■■□□□ 1.99
TRAF4-211ENST00000478021 HLA-DOAP06340 250 aa27.5■■□□□ 1.99
TRAF4-211ENST00000478021 CRACR2BQ8N4Y2 399 aaPredicted RBP27.5■■□□□ 1.99
TRAF4-211ENST00000478021 TRIM34Q9BYJ4 488 aa27.5■■□□□ 1.99
TRAF4-211ENST00000478021 DNAJC18Q9H819 358 aa27.5■■□□□ 1.99
TRAF4-211ENST00000478021 ARMT1Q9H993 441 aa27.5■■□□□ 1.99
TRAF4-211ENST00000478021 BTBD19C9JJ37 291 aa27.49■■□□□ 1.99
TRAF4-211ENST00000478021 TAF1CQ15572 869 aaPredicted RBP27.49■■□□□ 1.99
TRAF4-211ENST00000478021 CRNKL1Q9BZJ0 848 aaKnown RBP27.49■■□□□ 1.99
TRAF4-211ENST00000478021 MCOLN1Q9GZU1 580 aa27.49■■□□□ 1.99
TRAF4-211ENST00000478021 PTPRFP10586 1907 aa27.49■■□□□ 1.99
TRAF4-211ENST00000478021 TTC41PQ6P2S7 1318 aa27.48■■□□□ 1.99
TRAF4-211ENST00000478021 MBD4O95243 580 aa27.48■■□□□ 1.99
TRAF4-211ENST00000478021 SDR42E1Q8WUS8 393 aa27.48■■□□□ 1.99
TRAF4-211ENST00000478021 FKTNO75072 461 aa27.47■■□□□ 1.99
TRAF4-211ENST00000478021 MX1P20591 662 aa27.47■■□□□ 1.99
TRAF4-211ENST00000478021 CAP2P40123 477 aa27.47■■□□□ 1.99
TRAF4-211ENST00000478021 NOM1Q5C9Z4 860 aaKnown RBP27.47■■□□□ 1.99
TRAF4-211ENST00000478021 FOXP4Q8IVH2 680 aaPredicted RBP27.47■■□□□ 1.99
TRAF4-211ENST00000478021 PI4K2BQ8TCG2 481 aa27.47■■□□□ 1.99
TRAF4-211ENST00000478021 RWDD1Q9H446 243 aaPredicted RBP27.47■■□□□ 1.99
TRAF4-211ENST00000478021 ERC2O15083 957 aa27.46■■□□□ 1.99
TRAF4-211ENST00000478021 UBE3CQ15386 1083 aa27.46■■□□□ 1.99
TRAF4-211ENST00000478021 ZSCAN25Q6NSZ9 544 aa27.46■■□□□ 1.99
TRAF4-211ENST00000478021 KBTBD3Q8NAB2 608 aa27.46■■□□□ 1.99
TRAF4-211ENST00000478021 AFG3L2Q9Y4W6 797 aa27.46■■□□□ 1.99
TRAF4-211ENST00000478021 SALL3Q9BXA9 1300 aa27.45■■□□□ 1.99
TRAF4-211ENST00000478021 CXCL11O14625 94 aa27.45■■□□□ 1.98
TRAF4-211ENST00000478021 PRKAB2O43741 272 aa27.45■■□□□ 1.98
TRAF4-211ENST00000478021 IGHDP01880 384 aa27.45■■□□□ 1.98
TRAF4-211ENST00000478021 MOGSQ13724 837 aa27.45■■□□□ 1.98
TRAF4-211ENST00000478021 METTL16Q86W50 562 aaKnown RBP27.45■■□□□ 1.98
TRAF4-211ENST00000478021 BAZ2AQ9UIF9 1905 aaKnown RBP27.45■■□□□ 1.98
TRAF4-211ENST00000478021 TRIM75PA6NK02 468 aa27.44■■□□□ 1.98
TRAF4-211ENST00000478021 GDF11O95390 407 aa27.44■■□□□ 1.98
TRAF4-211ENST00000478021 SHROOM1Q2M3G4 852 aaPredicted RBP27.44■■□□□ 1.98
TRAF4-211ENST00000478021 CTU1Q7Z7A3 348 aaKnown RBP27.44■■□□□ 1.98
TRAF4-211ENST00000478021 ABHD8Q96I13 439 aa27.44■■□□□ 1.98
TRAF4-211ENST00000478021 PUS7LQ9H0K6 701 aaKnown RBP27.44■■□□□ 1.98
TRAF4-211ENST00000478021 ZFYVE28Q9HCC9 887 aa27.44■■□□□ 1.98
TRAF4-211ENST00000478021 GLRX3O76003 335 aaKnown RBP27.43■■□□□ 1.98
TRAF4-211ENST00000478021 POLR3DP05423 398 aaPredicted RBP27.43■■□□□ 1.98
TRAF4-211ENST00000478021 PLCD1P51178 756 aa27.43■■□□□ 1.98
TRAF4-211ENST00000478021 JAG1P78504 1218 aa27.43■■□□□ 1.98
TRAF4-211ENST00000478021 B4GALNT3Q6L9W6 998 aa27.43■■□□□ 1.98
TRAF4-211ENST00000478021 GADL1Q6ZQY3 521 aa27.43■■□□□ 1.98
TRAF4-211ENST00000478021 TTC6Q86TZ1 520 aa27.43■■□□□ 1.98
TRAF4-211ENST00000478021 MCM9Q9NXL9 1143 aa27.43■■□□□ 1.98
TRAF4-211ENST00000478021 A0A0G2JLL6 359 aaPredicted RBP27.42■■□□□ 1.98
TRAF4-211ENST00000478021 EVX2Q03828 476 aa27.42■■□□□ 1.98
TRAF4-211ENST00000478021 PRRT2Q7Z6L0 340 aaPredicted RBP27.42■■□□□ 1.98
TRAF4-211ENST00000478021 ANKRD23Q86SG2 305 aa27.42■■□□□ 1.98
TRAF4-211ENST00000478021 LNPKQ9C0E8 428 aa27.42■■□□□ 1.98
TRAF4-211ENST00000478021 DCP1AQ9NPI6 582 aaPredicted RBP27.42■■□□□ 1.98
TRAF4-211ENST00000478021 PDHXO00330 501 aa27.41■■□□□ 1.98
TRAF4-211ENST00000478021 SMC5Q8IY18 1101 aa27.41■■□□□ 1.98
TRAF4-211ENST00000478021 ZCCHC17Q9NP64 241 aaKnown RBP27.41■■□□□ 1.98
TRAF4-211ENST00000478021 SERPINB13Q9UIV8 391 aa27.41■■□□□ 1.98
TRAF4-211ENST00000478021 USP17L5A8MUK1 530 aa27.4■■□□□ 1.98
TRAF4-211ENST00000478021 CYP2D6P10635 497 aa27.4■■□□□ 1.98
TRAF4-211ENST00000478021 SPP2Q13103 211 aa27.4■■□□□ 1.98
TRAF4-211ENST00000478021 GPAT2Q6NUI2 795 aa27.4■■□□□ 1.98
TRAF4-211ENST00000478021 CD99L2Q8TCZ2 262 aa27.4■■□□□ 1.98
TRAF4-211ENST00000478021 EHD4Q9H223 541 aa27.4■■□□□ 1.98
TRAF4-211ENST00000478021 RNF113AO15541 343 aaKnown RBP27.39■■□□□ 1.98
TRAF4-211ENST00000478021 SLC4A4Q9Y6R1 1079 aa27.39■■□□□ 1.98
TRAF4-211ENST00000478021 ASNSP08243 561 aa27.38■■□□□ 1.97
TRAF4-211ENST00000478021 SP3Q02447 781 aa27.38■■□□□ 1.97
TRAF4-211ENST00000478021 FASTKD5Q7L8L6 764 aaKnown RBP27.38■■□□□ 1.97
TRAF4-211ENST00000478021 ZNF280CQ8ND82 737 aa27.38■■□□□ 1.97
TRAF4-211ENST00000478021 APPBP2Q92624 585 aa27.38■■□□□ 1.97
TRAF4-211ENST00000478021 OSBP2Q969R2 916 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms