RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 COL4A5P29400 1685 aa9.03□□□□□ -0.96
USP33-208ENST00000477949 RNF123Q5XPI4 1314 aa9.03□□□□□ -0.96
USP33-208ENST00000477949 SCN11AQ9UI33 1791 aa9.02□□□□□ -0.97
USP33-208ENST00000477949 EML1O00423 815 aa9.02□□□□□ -0.97
USP33-208ENST00000477949 CA12O43570 354 aa9.02□□□□□ -0.97
USP33-208ENST00000477949 SPATA31C1P0DKV0 1188 aa9.02□□□□□ -0.97
USP33-208ENST00000477949 CYP19A1P11511 503 aaPredicted RBP9.02□□□□□ -0.97
USP33-208ENST00000477949 ECE1P42892 770 aa9.02□□□□□ -0.97
USP33-208ENST00000477949 GATA4P43694 442 aa9.02□□□□□ -0.97
USP33-208ENST00000477949 SYT9Q86SS6 491 aa9.02□□□□□ -0.97
USP33-208ENST00000477949 WWC1Q8IX03 1113 aa9.02□□□□□ -0.97
USP33-208ENST00000477949 DNAJC10Q8IXB1 793 aa9.02□□□□□ -0.97
USP33-208ENST00000477949 GPC6Q9Y625 555 aaPredicted RBP9.02□□□□□ -0.97
USP33-208ENST00000477949 SPDYE3A6NKU9 549 aa9.01□□□□□ -0.97
USP33-208ENST00000477949 SIN3BO75182 1162 aa9.01□□□□□ -0.97
USP33-208ENST00000477949 NCOA4Q13772 614 aa9.01□□□□□ -0.97
USP33-208ENST00000477949 DOC2BQ14184 412 aa9.01□□□□□ -0.97
USP33-208ENST00000477949 PRR5LQ6MZQ0 368 aa9.01□□□□□ -0.97
USP33-208ENST00000477949 PRPF40BQ6NWY9 871 aaKnown RBP9.01□□□□□ -0.97
USP33-208ENST00000477949 PNMA8AQ86V59 439 aaPredicted RBP9.01□□□□□ -0.97
USP33-208ENST00000477949 ZNF622Q969S3 477 aaKnown RBP eCLIP9.01□□□□□ -0.97
USP33-208ENST00000477949 BRIP1Q9BX63 1249 aa9.01□□□□□ -0.97
USP33-208ENST00000477949 CARD11Q9BXL7 1154 aa9.01□□□□□ -0.97
USP33-208ENST00000477949 ZNF232Q9UNY5 417 aa9.01□□□□□ -0.97
USP33-208ENST00000477949 ZBTB1Q9Y2K1 713 aa9.01□□□□□ -0.97
USP33-208ENST00000477949 MRC1P22897 1456 aa9.01□□□□□ -0.97
USP33-208ENST00000477949 ADARB2-AS1A8MUL3 147 aa9□□□□□ -0.97
USP33-208ENST00000477949 FZD9O00144 591 aa9□□□□□ -0.97
USP33-208ENST00000477949 TRAF5O00463 557 aa9□□□□□ -0.97
USP33-208ENST00000477949 HSP90AB1P08238 724 aaKnown RBP9□□□□□ -0.97
USP33-208ENST00000477949 EPHA4P54764 986 aa9□□□□□ -0.97
USP33-208ENST00000477949 CABP4P57796 275 aa9□□□□□ -0.97
USP33-208ENST00000477949 SLC9A9Q8IVB4 645 aa9□□□□□ -0.97
USP33-208ENST00000477949 MDFIQ99750 246 aa9□□□□□ -0.97
USP33-208ENST00000477949 SEMA6BQ9H3T3 888 aa9□□□□□ -0.97
USP33-208ENST00000477949 UBR2Q8IWV8 1755 aa8.99□□□□□ -0.97
USP33-208ENST00000477949 CACNA1AO00555 2505 aa8.99□□□□□ -0.97
USP33-208ENST00000477949 UNC80Q8N2C7 3258 aa8.99□□□□□ -0.97
USP33-208ENST00000477949 SERTM1A2A2V5 107 aa8.99□□□□□ -0.97
USP33-208ENST00000477949 SRGNP10124 158 aa8.99□□□□□ -0.97
USP33-208ENST00000477949 PDE6BP35913 854 aa8.99□□□□□ -0.97
USP33-208ENST00000477949 GRM1Q13255 1194 aa8.99□□□□□ -0.97
USP33-208ENST00000477949 EIF4A2Q14240 407 aaKnown RBP8.99□□□□□ -0.97
USP33-208ENST00000477949 TBC1D9BQ66K14 1250 aa8.99□□□□□ -0.97
USP33-208ENST00000477949 STYK1Q6J9G0 422 aa8.99□□□□□ -0.97
USP33-208ENST00000477949 SAPCD2Q86UD0 394 aa8.99□□□□□ -0.97
USP33-208ENST00000477949 TRIM50Q86XT4 487 aa8.99□□□□□ -0.97
USP33-208ENST00000477949 SIN3AQ96ST3 1273 aa8.99□□□□□ -0.97
USP33-208ENST00000477949 MKI67P46013 3256 aaKnown RBP8.98□□□□□ -0.97
USP33-208ENST00000477949 SFSWAPQ12872 951 aaKnown RBP8.98□□□□□ -0.97
USP33-208ENST00000477949 PRRT3Q5FWE3 981 aa8.98□□□□□ -0.97
USP33-208ENST00000477949 HABP4Q5JVS0 413 aaKnown RBP8.98□□□□□ -0.97
USP33-208ENST00000477949 DEPDC4Q8N2C3 294 aa8.98□□□□□ -0.97
USP33-208ENST00000477949 HHIPL1Q96JK4 782 aa8.98□□□□□ -0.97
USP33-208ENST00000477949 USP17L5A8MUK1 530 aa8.97□□□□□ -0.97
USP33-208ENST00000477949 ZBTB7BO15156 539 aaPredicted RBP8.97□□□□□ -0.97
USP33-208ENST00000477949 FKBP4Q02790 459 aaKnown RBP eCLIP8.97□□□□□ -0.97
USP33-208ENST00000477949 TBCELQ5QJ74 424 aa8.97□□□□□ -0.97
USP33-208ENST00000477949 SOGA3Q5TF21 947 aa8.97□□□□□ -0.97
USP33-208ENST00000477949 CIAPIN1Q6FI81 312 aa8.97□□□□□ -0.97
USP33-208ENST00000477949 ZNF530Q6P9A1 599 aaPredicted RBP8.97□□□□□ -0.97
USP33-208ENST00000477949 OLFM4Q6UX06 510 aa8.97□□□□□ -0.97
USP33-208ENST00000477949 GPC2Q8N158 579 aa8.97□□□□□ -0.97
USP33-208ENST00000477949 ZNF277Q9NRM2 450 aaPredicted RBP8.97□□□□□ -0.97
USP33-208ENST00000477949 POLKQ9UBT6 870 aa8.97□□□□□ -0.97
USP33-208ENST00000477949 EIF5P55010 431 aaKnown RBP8.96□□□□□ -0.98
USP33-208ENST00000477949 NEUROD1Q13562 356 aa8.96□□□□□ -0.98
USP33-208ENST00000477949 CCDC93Q567U6 631 aa8.96□□□□□ -0.98
USP33-208ENST00000477949 C1orf53Q5VUE5 145 aa8.96□□□□□ -0.98
USP33-208ENST00000477949 TNFRSF25Q93038 417 aa8.96□□□□□ -0.98
USP33-208ENST00000477949 SLC30A3Q99726 388 aa8.96□□□□□ -0.98
USP33-208ENST00000477949 PRDM6Q9NQX0 595 aa8.96□□□□□ -0.98
USP33-208ENST00000477949 ANKIB1Q9P2G1 1089 aa8.96□□□□□ -0.98
USP33-208ENST00000477949 TRIOBPQ9H2D6 2365 aa8.95□□□□□ -0.98
USP33-208ENST00000477949 ST20-MTHFSA0A0A6YYL1 179 aa8.95□□□□□ -0.98
USP33-208ENST00000477949 PPM1GO15355 546 aaPredicted RBP8.95□□□□□ -0.98
USP33-208ENST00000477949 ITGB7P26010 798 aa8.95□□□□□ -0.98
USP33-208ENST00000477949 EPS15P42566 896 aa8.95□□□□□ -0.98
USP33-208ENST00000477949 MTHFSP49914 203 aa8.95□□□□□ -0.98
USP33-208ENST00000477949 ATP1A2P50993 1020 aa8.95□□□□□ -0.98
USP33-208ENST00000477949 FXR1P51114 621 aaKnown RBP eCLIP8.95□□□□□ -0.98
USP33-208ENST00000477949 RHPN1Q8TCX5 695 aa8.95□□□□□ -0.98
USP33-208ENST00000477949 GCC1Q96CN9 775 aa8.95□□□□□ -0.98
USP33-208ENST00000477949 MASTLQ96GX5 879 aa8.95□□□□□ -0.98
USP33-208ENST00000477949 CEP290O15078 2479 aa8.95□□□□□ -0.98
USP33-208ENST00000477949 KLRG2A4D1S0 409 aaPredicted RBP8.94□□□□□ -0.98
USP33-208ENST00000477949 M0R082 166 aa8.94□□□□□ -0.98
USP33-208ENST00000477949 RAD21O60216 631 aa8.94□□□□□ -0.98
USP33-208ENST00000477949 PSMA6P60900 246 aaKnown RBP8.94□□□□□ -0.98
USP33-208ENST00000477949 SPEM2Q0P670 501 aa8.94□□□□□ -0.98
USP33-208ENST00000477949 PLEKHO1Q53GL0 409 aaPredicted RBP8.94□□□□□ -0.98
USP33-208ENST00000477949 CCDC102BQ68D86 513 aa8.94□□□□□ -0.98
USP33-208ENST00000477949 TPCN2Q8NHX9 752 aa8.94□□□□□ -0.98
USP33-208ENST00000477949 ZNF417Q8TAU3 575 aa8.94□□□□□ -0.98
USP33-208ENST00000477949 ZNF587Q96SQ5 575 aaPredicted RBP8.94□□□□□ -0.98
USP33-208ENST00000477949 CHMP3Q9Y3E7 222 aa8.94□□□□□ -0.98
USP33-208ENST00000477949 STARD13Q9Y3M8 1113 aa8.94□□□□□ -0.98
USP33-208ENST00000477949 FAM155AB1AL88 458 aaPredicted RBP8.93□□□□□ -0.98
USP33-208ENST00000477949 IARSP41252 1262 aaKnown RBP8.93□□□□□ -0.98
USP33-208ENST00000477949 TRIM28Q13263 835 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms