RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 NAT10Q9H0A0 1025 aaKnown RBP12.16□□□□□ -0.46
MINDY3-206ENST00000477891 RNF41Q9H4P4 317 aaPredicted RBP12.16□□□□□ -0.46
MINDY3-206ENST00000477891 TFCP2L1Q9NZI6 479 aa12.16□□□□□ -0.46
MINDY3-206ENST00000477891 ANAPC4Q9UJX5 808 aa12.16□□□□□ -0.46
MINDY3-206ENST00000477891 BCORQ6W2J9 1755 aa12.16□□□□□ -0.46
MINDY3-206ENST00000477891 TNKSO95271 1327 aa12.16□□□□□ -0.46
MINDY3-206ENST00000477891 RRP9O43818 475 aaKnown RBP12.16□□□□□ -0.46
MINDY3-206ENST00000477891 RBM6P78332 1123 aaKnown RBP12.16□□□□□ -0.46
MINDY3-206ENST00000477891 GRIN1Q05586 938 aa12.16□□□□□ -0.46
MINDY3-206ENST00000477891 NR5A1Q13285 461 aa12.16□□□□□ -0.46
MINDY3-206ENST00000477891 FOXP4Q8IVH2 680 aaPredicted RBP12.16□□□□□ -0.46
MINDY3-206ENST00000477891 TMTC2Q8N394 836 aa12.16□□□□□ -0.46
MINDY3-206ENST00000477891 SHISA4Q96DD7 197 aa12.16□□□□□ -0.46
MINDY3-206ENST00000477891 NGLY1Q96IV0 654 aa12.16□□□□□ -0.46
MINDY3-206ENST00000477891 UBAC1Q9BSL1 405 aa12.16□□□□□ -0.46
MINDY3-206ENST00000477891 CHD4Q14839 1912 aa12.16□□□□□ -0.46
MINDY3-206ENST00000477891 NID2Q14112 1375 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 DYNC1I1O14576 645 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 NCAPHQ15003 741 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 LONRF3Q496Y0 759 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 RESP18Q5W5W9 173 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 FILIP1Q7Z7B0 1213 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 SLC51AQ86UW1 340 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 TXNRD3Q86VQ6 643 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 TRIM22Q8IYM9 498 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 ENAHQ8N8S7 591 aaPredicted RBP12.15□□□□□ -0.46
MINDY3-206ENST00000477891 OXER1Q8TDS5 423 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 ESR2Q92731 530 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 PRIMPOLQ96LW4 560 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 NARFQ9UHQ1 456 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 TIAM2Q8IVF5 1701 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 CNTNAP4Q9C0A0 1308 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 NLRP12P59046 1061 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 PNOCQ13519 176 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 ZRSR1Q15695 479 aaKnown RBP12.15□□□□□ -0.46
MINDY3-206ENST00000477891 CTR9Q6PD62 1173 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 JMYQ8N9B5 988 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 NSUN4Q96CB9 384 aaKnown RBP12.15□□□□□ -0.46
MINDY3-206ENST00000477891 TIGD1Q96MW7 591 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 SETDB2Q96T68 719 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 MTA3Q9BTC8 594 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 JAG2Q9Y219 1238 aa12.15□□□□□ -0.46
MINDY3-206ENST00000477891 COL5A3P25940 1745 aaPredicted RBP12.14□□□□□ -0.47
MINDY3-206ENST00000477891 FAM237AA0A1B0GTK4 181 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 hCG_1642624A0A1W2PR95 340 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 USP17L12C9JPN9 530 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 USP17L21D6R901 530 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 MECOMQ03112 1051 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
MINDY3-206ENST00000477891 WASF1Q92558 559 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 NLRP3Q96P20 1036 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 TUBE1Q9UJT0 475 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 KCNH3Q9ULD8 1083 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 PCDHB6Q9Y5E3 794 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 CACNA1SQ13698 1873 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 CICQ96RK0 1608 aaPredicted RBP12.14□□□□□ -0.47
MINDY3-206ENST00000477891 LAMB2P55268 1798 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 CCDC196A0A1B0GTZ2 297 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 GNPATO15228 680 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 RPS6KA4O75676 772 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 DEXIO95424 95 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 PRDX5P30044 214 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 TM4SF1P30408 202 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 ZSCAN10Q96SZ4 725 aaPredicted RBP12.14□□□□□ -0.47
MINDY3-206ENST00000477891 BPIFA3Q9BQP9 254 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 HSD3B7Q9H2F3 369 aa12.14□□□□□ -0.47
MINDY3-206ENST00000477891 FOXN1O15353 648 aa12.13□□□□□ -0.47
MINDY3-206ENST00000477891 CUTAO60888 179 aa12.13□□□□□ -0.47
MINDY3-206ENST00000477891 ATP2B1P20020 1258 aa12.13□□□□□ -0.47
MINDY3-206ENST00000477891 SAFBQ15424 915 aaKnown RBP eCLIP12.13□□□□□ -0.47
MINDY3-206ENST00000477891 VPS72Q15906 364 aa12.13□□□□□ -0.47
MINDY3-206ENST00000477891 PKN1Q16512 942 aa12.13□□□□□ -0.47
MINDY3-206ENST00000477891 METTL16Q86W50 562 aaKnown RBP12.13□□□□□ -0.47
MINDY3-206ENST00000477891 C16orf45Q96MC5 204 aaPredicted RBP12.13□□□□□ -0.47
MINDY3-206ENST00000477891 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
MINDY3-206ENST00000477891 FOXP1Q9H334 677 aaPredicted RBP12.13□□□□□ -0.47
MINDY3-206ENST00000477891 AATFQ9NY61 560 aaKnown RBP eCLIP12.13□□□□□ -0.47
MINDY3-206ENST00000477891 ECM29Q5VYK3 1845 aa12.13□□□□□ -0.47
MINDY3-206ENST00000477891 NMT2O60551 498 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 ZPR1O75312 459 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 HIBADHP31937 336 aaKnown RBP12.12□□□□□ -0.47
MINDY3-206ENST00000477891 FUT2Q10981 343 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 KRI1Q8N9T8 703 aaKnown RBP12.12□□□□□ -0.47
MINDY3-206ENST00000477891 ARHGEF1Q92888 912 aaKnown RBP12.12□□□□□ -0.47
MINDY3-206ENST00000477891 XPO4Q9C0E2 1151 aaKnown RBP12.12□□□□□ -0.47
MINDY3-206ENST00000477891 CABP5Q9NP86 173 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 IFNKQ9P0W0 207 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 BAZ2AQ9UIF9 1905 aaKnown RBP12.12□□□□□ -0.47
MINDY3-206ENST00000477891 MYH2Q9UKX2 1941 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 FAM205CA6NFA0 338 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 TOM1O60784 492 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 PLEKHA8P1O95397 391 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 FGRP09769 529 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 SKILP12757 684 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 ATP1A3P13637 1013 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 BMP6P22004 513 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 LMOD1P29536 600 aaPredicted RBP12.12□□□□□ -0.47
MINDY3-206ENST00000477891 TROAPQ12815 778 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 CHAF1AQ13111 956 aaPredicted RBP12.12□□□□□ -0.47
MINDY3-206ENST00000477891 EARS2Q5JPH6 523 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms