RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CACNA1SQ13698 1873 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 LRRC37AA6NMS7 1700 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 KIAA1551Q9HCM1 1747 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 A0A0G2JLW4 131 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 PRKAB2O43741 272 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 JAK2O60674 1132 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 KDM4AO75164 1064 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 CTDNEP1O95476 244 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 MMP10P09238 476 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 KLRK1P26718 216 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 FKBP1AP62942 108 aaKnown RBP9.26□□□□□ -0.93
VMA21-203ENST00000477649 CCT2P78371 535 aaKnown RBP9.26□□□□□ -0.93
VMA21-203ENST00000477649 RESTQ13127 1097 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 SF3B2Q13435 895 aaKnown RBP9.26□□□□□ -0.93
VMA21-203ENST00000477649 COL9A3Q14050 684 aaPredicted RBP9.26□□□□□ -0.93
VMA21-203ENST00000477649 SLC15A2Q16348 729 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
VMA21-203ENST00000477649 CYB5R4Q7L1T6 521 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 CDC37L1Q7L3B6 337 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 ADGRA1Q86SQ6 560 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 TRIM22Q8IYM9 498 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 MPNDQ8N594 471 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 FOXD4L4Q8WXT5 416 aaPredicted RBP9.26□□□□□ -0.93
VMA21-203ENST00000477649 CNKSR1Q969H4 720 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 ZC3H12CQ9C0D7 883 aaKnown RBP9.26□□□□□ -0.93
VMA21-203ENST00000477649 GZF1Q9H116 711 aaPredicted RBP9.26□□□□□ -0.93
VMA21-203ENST00000477649 ORC3Q9UBD5 711 aaPredicted RBP9.26□□□□□ -0.93
VMA21-203ENST00000477649 BRPF3Q9ULD4 1205 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 HPS5Q9UPZ3 1129 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 MROH7-TTC4A0A0A0MT08 1334 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 NEDD4P46934 1319 aa9.26□□□□□ -0.93
VMA21-203ENST00000477649 GPR75-ASB3A0A0A6YYF3 556 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 GOLGA6L4A6NEF3 574 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 GOLGA8AA7E2F4 631 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 MINDY4BA8MYZ0 360 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 H0YIN7 160 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 C6orf229H3BNL8 230 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 DDAH1O94760 285 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 IFNAR1P17181 557 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 PRDX5P30044 214 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 BAG6P46379 1132 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 DNM1Q05193 864 aaKnown RBP9.25□□□□□ -0.93
VMA21-203ENST00000477649 TRIM29Q14134 588 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 ZSCAN23Q3MJ62 389 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 CCDC183Q5T5S1 534 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 CAVIN1Q6NZI2 390 aaKnown RBP9.25□□□□□ -0.93
VMA21-203ENST00000477649 CTR9Q6PD62 1173 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 DPP8Q6V1X1 898 aaPredicted RBP9.25□□□□□ -0.93
VMA21-203ENST00000477649 CHST3Q7LGC8 479 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 TXNRD3Q86VQ6 643 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 FAM177A1Q8N128 213 aaPredicted RBP9.25□□□□□ -0.93
VMA21-203ENST00000477649 SUPT20HQ8NEM7 779 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 FBXO18Q8NFZ0 1043 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 GPT2Q8TD30 523 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 SLC16A10Q8TF71 515 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 ANP32BQ92688 251 aaKnown RBP9.25□□□□□ -0.93
VMA21-203ENST00000477649 DDX11Q96FC9 970 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 C8orf76Q96K31 380 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 CAMKK2Q96RR4 588 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 MAP3K14Q99558 947 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 MRIQ9BWK5 157 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 DCP1AQ9NPI6 582 aaPredicted RBP9.25□□□□□ -0.93
VMA21-203ENST00000477649 TOMM22Q9NS69 142 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 RBM28Q9NW13 759 aaKnown RBP9.25□□□□□ -0.93
VMA21-203ENST00000477649 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
VMA21-203ENST00000477649 CNPY2Q9Y2B0 182 aa9.25□□□□□ -0.93
VMA21-203ENST00000477649 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.25□□□□□ -0.93
VMA21-203ENST00000477649 TNS1Q9HBL0 1735 aaKnown RBP9.25□□□□□ -0.93
VMA21-203ENST00000477649 ROBO3Q96MS0 1386 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 USP17L12C9JPN9 530 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 USP17L21D6R901 530 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 XBP1P17861 261 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 IARSP41252 1262 aaKnown RBP9.24□□□□□ -0.93
VMA21-203ENST00000477649 USP5P45974 858 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 CTDSPL2Q05D32 466 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 RTN1Q16799 776 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 PODNQ7Z5L7 613 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 CATIPQ7Z7H3 387 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 CCDC125Q86Z20 511 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 ZNF384Q8TF68 577 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 SDR42E1Q8WUS8 393 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 ANKS1AQ92625 1134 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 ZSCAN10Q96SZ4 725 aaPredicted RBP9.24□□□□□ -0.93
VMA21-203ENST00000477649 GRPEL1Q9HAV7 217 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 AATFQ9NY61 560 aaKnown RBP eCLIP9.24□□□□□ -0.93
VMA21-203ENST00000477649 POLLQ9UGP5 575 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 MKRN1Q9UHC7 482 aaKnown RBP9.24□□□□□ -0.93
VMA21-203ENST00000477649 QSER1Q2KHR3 1735 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 GAKO14976 1311 aa9.24□□□□□ -0.93
VMA21-203ENST00000477649 MYH13Q9UKX3 1938 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 WTIPA6NIX2 430 aaPredicted RBP9.23□□□□□ -0.93
VMA21-203ENST00000477649 G3V3G9 751 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 FIBPO43427 364 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 FMNL1O95466 1100 aaPredicted RBP9.23□□□□□ -0.93
VMA21-203ENST00000477649 YEATS4O95619 227 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 FDPSP14324 419 aaKnown RBP9.23□□□□□ -0.93
VMA21-203ENST00000477649 DYNLL1P63167 89 aaKnown RBP9.23□□□□□ -0.93
VMA21-203ENST00000477649 HDLBPQ00341 1268 aaKnown RBP9.23□□□□□ -0.93
VMA21-203ENST00000477649 SSRP1Q08945 709 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms