RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 MAP3K14Q99558 947 aa14.26□□□□□ -0.13
PRPF39-203ENST00000477626 CRNKL1Q9BZJ0 848 aaKnown RBP14.26□□□□□ -0.13
PRPF39-203ENST00000477626 NACAP1Q9BZK3 213 aa14.26□□□□□ -0.13
PRPF39-203ENST00000477626 DNAJC18Q9H819 358 aa14.26□□□□□ -0.13
PRPF39-203ENST00000477626 RASA1P20936 1047 aa14.26□□□□□ -0.13
PRPF39-203ENST00000477626 STK3Q13188 491 aa14.26□□□□□ -0.13
PRPF39-203ENST00000477626 ZSCAN10Q96SZ4 725 aaPredicted RBP14.26□□□□□ -0.13
PRPF39-203ENST00000477626 ECE2O60344 883 aa14.25□□□□□ -0.13
PRPF39-203ENST00000477626 GADD45BO75293 160 aaPredicted RBP14.25□□□□□ -0.13
PRPF39-203ENST00000477626 SH3BP5LQ7L8J4 393 aa14.25□□□□□ -0.13
PRPF39-203ENST00000477626 LTBP3Q9NS15 1303 aa14.25□□□□□ -0.13
PRPF39-203ENST00000477626 IDI2Q9BXS1 227 aa14.25□□□□□ -0.13
PRPF39-203ENST00000477626 MORC2Q9Y6X9 1032 aaPredicted RBP14.25□□□□□ -0.13
PRPF39-203ENST00000477626 OTOFQ9HC10 1997 aa14.25□□□□□ -0.13
PRPF39-203ENST00000477626 KIF28PB7ZC32 967 aa14.25□□□□□ -0.13
PRPF39-203ENST00000477626 FMNL1O95466 1100 aaPredicted RBP14.25□□□□□ -0.13
PRPF39-203ENST00000477626 IFNAR1P17181 557 aa14.25□□□□□ -0.13
PRPF39-203ENST00000477626 TNKSO95271 1327 aa14.25□□□□□ -0.13
PRPF39-203ENST00000477626 TDO2P48775 406 aa14.24□□□□□ -0.13
PRPF39-203ENST00000477626 GTF2IP78347 998 aa14.24□□□□□ -0.13
PRPF39-203ENST00000477626 MTFR1LQ9H019 292 aa14.24□□□□□ -0.13
PRPF39-203ENST00000477626 RNF41Q9H4P4 317 aaPredicted RBP14.24□□□□□ -0.13
PRPF39-203ENST00000477626 CNTNAP1P78357 1384 aa14.24□□□□□ -0.13
PRPF39-203ENST00000477626 VIL1P09327 827 aaKnown RBP14.24□□□□□ -0.13
PRPF39-203ENST00000477626 HMGN5P82970 282 aaKnown RBP14.24□□□□□ -0.13
PRPF39-203ENST00000477626 CDC42EP5Q6NZY7 148 aa14.24□□□□□ -0.13
PRPF39-203ENST00000477626 USP48Q86UV5 1035 aa14.24□□□□□ -0.13
PRPF39-203ENST00000477626 TNFRSF25Q93038 417 aa14.24□□□□□ -0.13
PRPF39-203ENST00000477626 CNPY2Q9Y2B0 182 aa14.24□□□□□ -0.13
PRPF39-203ENST00000477626 SRCAPQ6ZRS2 3230 aa14.24□□□□□ -0.13
PRPF39-203ENST00000477626 NMT2O60551 498 aa14.24□□□□□ -0.13
PRPF39-203ENST00000477626 DZIP1Q86YF9 867 aaKnown RBP14.24□□□□□ -0.13
PRPF39-203ENST00000477626 FAM198AQ9UFP1 575 aa14.24□□□□□ -0.13
PRPF39-203ENST00000477626 DOCK1Q14185 1865 aa14.24□□□□□ -0.13
PRPF39-203ENST00000477626 U2AF2P26368 475 aaKnown RBP eCLIP14.23□□□□□ -0.131e-6■■■■□ 20.8
PRPF39-203ENST00000477626 GUCY1A2P33402 732 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 ZNF445P59923 1031 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 CCT2P78371 535 aaKnown RBP14.23□□□□□ -0.13
PRPF39-203ENST00000477626 DOK7Q18PE1 504 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 KLHL34Q8N239 644 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 MTMR14Q8NCE2 650 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 SERPINA10Q9UK55 444 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 TAOK2Q9UL54 1235 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 GAS2L3Q86XJ1 694 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 FBXO18Q8NFZ0 1043 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 EHD4Q9H223 541 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 CNTNAP5Q8WYK1 1306 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 GOLGA8BA8MQT2 603 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 M0R2N6 131 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 PTMSP20962 102 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 R3HDM1Q15032 1099 aaKnown RBP14.23□□□□□ -0.13
PRPF39-203ENST00000477626 AOC3Q16853 763 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 MCTP1Q6DN14 999 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 FUCA2Q9BTY2 467 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 TMEM63CQ9P1W3 806 aa14.23□□□□□ -0.13
PRPF39-203ENST00000477626 DNM1Q05193 864 aaKnown RBP14.22□□□□□ -0.13
PRPF39-203ENST00000477626 GSE1Q14687 1217 aa14.22□□□□□ -0.13
PRPF39-203ENST00000477626 TTC6Q86TZ1 520 aa14.22□□□□□ -0.13
PRPF39-203ENST00000477626 DYNLL2Q96FJ2 89 aa14.22□□□□□ -0.13
PRPF39-203ENST00000477626 NFKBIEO00221 500 aa14.22□□□□□ -0.13
PRPF39-203ENST00000477626 RIMBP2O15034 1052 aa14.22□□□□□ -0.13
PRPF39-203ENST00000477626 LARP1BQ659C4 914 aaKnown RBP14.22□□□□□ -0.13
PRPF39-203ENST00000477626 RBM43Q6ZSC3 357 aaKnown RBP14.22□□□□□ -0.13
PRPF39-203ENST00000477626 CRACR2BQ8N4Y2 399 aaPredicted RBP14.22□□□□□ -0.13
PRPF39-203ENST00000477626 EYA3Q99504 573 aa14.22□□□□□ -0.13
PRPF39-203ENST00000477626 C6orf229H3BNL8 230 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 DDAH1O94760 285 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 APPP05067 770 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 HSP90AA1P07900 732 aaKnown RBP14.21□□□□□ -0.13
PRPF39-203ENST00000477626 SNHG28P0DPA3 235 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 PDCP20941 246 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 ZFPM1Q8IX07 1006 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 ZNF654Q8IZM8 581 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 DBNDD1Q9H9R9 158 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 TMEM67Q5HYA8 995 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 TGFBRAP1Q8WUH2 860 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 ESR2Q92731 530 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 PGBD1Q96JS3 809 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 GJB4Q9NTQ9 266 aa14.21□□□□□ -0.13
PRPF39-203ENST00000477626 SHMT1P34896 483 aa14.21□□□□□ -0.14
PRPF39-203ENST00000477626 RALYLQ86SE5 291 aaKnown RBP14.21□□□□□ -0.14
PRPF39-203ENST00000477626 TTLL6Q8N841 843 aa14.21□□□□□ -0.14
PRPF39-203ENST00000477626 AIFM3Q96NN9 605 aa14.21□□□□□ -0.14
PRPF39-203ENST00000477626 MYL10Q9BUA6 226 aa14.21□□□□□ -0.14
PRPF39-203ENST00000477626 NPHP1O15259 732 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 ZBTB7AO95365 584 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 KIF23Q02241 960 aaPredicted RBP14.2□□□□□ -0.14
PRPF39-203ENST00000477626 MAP3K10Q02779 954 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 SKOR2Q2VWA4 1001 aaPredicted RBP14.2□□□□□ -0.14
PRPF39-203ENST00000477626 ZKSCAN3Q9BRR0 538 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 MAD2L2Q9UI95 211 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 PTPRFP10586 1907 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 ADAMTS3O15072 1205 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 CRKP46108 304 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 DGKHQ86XP1 1220 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 ZC3H12CQ9C0D7 883 aaKnown RBP14.2□□□□□ -0.14
PRPF39-203ENST00000477626 OSBPL5Q9H0X9 879 aaPredicted RBP14.2□□□□□ -0.14
PRPF39-203ENST00000477626 LDHCP07864 332 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 NFIAQ12857 509 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 TATDN1Q6P1N9 297 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms