RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 CRHR2Q13324 411 aa21.43■■□□□ 1.02
PTPN7-209ENST00000477554 PPIL2Q13356 520 aa21.43■■□□□ 1.02
PTPN7-209ENST00000477554 LCORLQ8N3X6 602 aa21.43■■□□□ 1.02
PTPN7-209ENST00000477554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.43■■□□□ 1.02
PTPN7-209ENST00000477554 ZSWIM8A7E2V4 1837 aa21.42■■□□□ 1.02
PTPN7-209ENST00000477554 BTBD19C9JJ37 291 aa21.42■■□□□ 1.02
PTPN7-209ENST00000477554 SMIM22K7EJ46 135 aa21.42■■□□□ 1.02
PTPN7-209ENST00000477554 GPR25O00155 361 aa21.42■■□□□ 1.02
PTPN7-209ENST00000477554 IGHDP01880 384 aa21.42■■□□□ 1.02
PTPN7-209ENST00000477554 MCOLN1Q9GZU1 580 aa21.42■■□□□ 1.02
PTPN7-209ENST00000477554 ECHDC1Q9NTX5 307 aa21.42■■□□□ 1.02
PTPN7-209ENST00000477554 PTPRFP10586 1907 aa21.41■■□□□ 1.02
PTPN7-209ENST00000477554 PTPRAP18433 802 aa21.41■■□□□ 1.02
PTPN7-209ENST00000477554 GTF2A2P52657 109 aa21.41■■□□□ 1.02
PTPN7-209ENST00000477554 PPATQ06203 517 aa21.41■■□□□ 1.02
PTPN7-209ENST00000477554 DGKZQ13574 1117 aa21.41■■□□□ 1.02
PTPN7-209ENST00000477554 TTF1Q15361 905 aaPredicted RBP21.41■■□□□ 1.02
PTPN7-209ENST00000477554 SCYL3Q8IZE3 742 aa21.41■■□□□ 1.02
PTPN7-209ENST00000477554 NAV1Q8NEY1 1877 aa21.4■■□□□ 1.02
PTPN7-209ENST00000477554 PRKAB2O43741 272 aa21.4■■□□□ 1.02
PTPN7-209ENST00000477554 PLCG2P16885 1265 aa21.4■■□□□ 1.02
PTPN7-209ENST00000477554 ADD2P35612 726 aa21.4■■□□□ 1.02
PTPN7-209ENST00000477554 SDR42E1Q8WUS8 393 aa21.4■■□□□ 1.02
PTPN7-209ENST00000477554 ARMT1Q9H993 441 aa21.4■■□□□ 1.02
PTPN7-209ENST00000477554 ZHX2Q9Y6X8 837 aa21.4■■□□□ 1.02
PTPN7-209ENST00000477554 CENPFP49454 3210 aa21.4■■□□□ 1.02
PTPN7-209ENST00000477554 SALL3Q9BXA9 1300 aa21.4■■□□□ 1.02
PTPN7-209ENST00000477554 MAGEB6P1A0A0J9YX57 407 aa21.39■■□□□ 1.02
PTPN7-209ENST00000477554 TBC1D12O60347 775 aa21.39■■□□□ 1.02
PTPN7-209ENST00000477554 INHBEP58166 350 aa21.39■■□□□ 1.02
PTPN7-209ENST00000477554 PI4K2BQ8TCG2 481 aa21.39■■□□□ 1.02
PTPN7-209ENST00000477554 CFHR5Q9BXR6 569 aa21.39■■□□□ 1.02
PTPN7-209ENST00000477554 KCNH4Q9UQ05 1017 aa21.39■■□□□ 1.02
PTPN7-209ENST00000477554 HDAC1Q13547 482 aaPredicted RBP21.38■■□□□ 1.01
PTPN7-209ENST00000477554 ANKRD45Q5TZF3 282 aa21.38■■□□□ 1.01
PTPN7-209ENST00000477554 ABHD8Q96I13 439 aa21.38■■□□□ 1.01
PTPN7-209ENST00000477554 AFG3L2Q9Y4W6 797 aa21.38■■□□□ 1.01
PTPN7-209ENST00000477554 BAZ2AQ9UIF9 1905 aaKnown RBP21.38■■□□□ 1.01
PTPN7-209ENST00000477554 CTNND1O60716 968 aaKnown RBP21.38■■□□□ 1.01
PTPN7-209ENST00000477554 GDF11O95390 407 aa21.38■■□□□ 1.01
PTPN7-209ENST00000477554 CYP2D6P10635 497 aa21.38■■□□□ 1.01
PTPN7-209ENST00000477554 USP5P45974 858 aa21.38■■□□□ 1.01
PTPN7-209ENST00000477554 PLCD1P51178 756 aa21.38■■□□□ 1.01
PTPN7-209ENST00000477554 SNAPC2Q13487 334 aa21.38■■□□□ 1.01
PTPN7-209ENST00000477554 PUS7LQ9H0K6 701 aaKnown RBP21.38■■□□□ 1.01
PTPN7-209ENST00000477554 PPP4R2Q9NY27 417 aa21.38■■□□□ 1.01
PTPN7-209ENST00000477554 PI4KBQ9UBF8 816 aa21.38■■□□□ 1.01
PTPN7-209ENST00000477554 MBD4O95243 580 aa21.37■■□□□ 1.01
PTPN7-209ENST00000477554 GPAT2Q6NUI2 795 aa21.37■■□□□ 1.01
PTPN7-209ENST00000477554 METTL16Q86W50 562 aaKnown RBP21.37■■□□□ 1.01
PTPN7-209ENST00000477554 TRIM75PA6NK02 468 aa21.36■■□□□ 1.01
PTPN7-209ENST00000477554 CETPP11597 493 aa21.36■■□□□ 1.01
PTPN7-209ENST00000477554 PICK1Q9NRD5 415 aa21.36■■□□□ 1.01
PTPN7-209ENST00000477554 IGSF3O75054 1194 aa21.35■■□□□ 1.01
PTPN7-209ENST00000477554 ECM2O94769 699 aaPredicted RBP21.35■■□□□ 1.01
PTPN7-209ENST00000477554 ALDH1A1P00352 501 aa21.35■■□□□ 1.01
PTPN7-209ENST00000477554 CAP2P40123 477 aa21.35■■□□□ 1.01
PTPN7-209ENST00000477554 TAF1CQ15572 869 aaPredicted RBP21.35■■□□□ 1.01
PTPN7-209ENST00000477554 B4GALNT3Q6L9W6 998 aa21.35■■□□□ 1.01
PTPN7-209ENST00000477554 DHX36Q9H2U1 1008 aaKnown RBP21.35■■□□□ 1.01
PTPN7-209ENST00000477554 CYP2D7A0A087X1C5 515 aa21.34■■□□□ 1.01
PTPN7-209ENST00000477554 FKTNO75072 461 aa21.34■■□□□ 1.01
PTPN7-209ENST00000477554 CD99L2Q8TCZ2 262 aa21.34■■□□□ 1.01
PTPN7-209ENST00000477554 DCP1AQ9NPI6 582 aaPredicted RBP21.34■■□□□ 1.01
PTPN7-209ENST00000477554 A0A0G2JLL6 359 aaPredicted RBP21.33■■□□□ 1.01
PTPN7-209ENST00000477554 MX1P20591 662 aa21.33■■□□□ 1.01
PTPN7-209ENST00000477554 PRRT2Q7Z6L0 340 aaPredicted RBP21.33■■□□□ 1.01
PTPN7-209ENST00000477554 OSBP2Q969R2 916 aa21.33■■□□□ 1.01
PTPN7-209ENST00000477554 LNPKQ9C0E8 428 aa21.33■■□□□ 1.01
PTPN7-209ENST00000477554 HERC5Q9UII4 1024 aaKnown RBP21.33■■□□□ 1.01
PTPN7-209ENST00000477554 PDHXO00330 501 aa21.32■■□□□ 1
PTPN7-209ENST00000477554 CTU1Q7Z7A3 348 aaKnown RBP21.32■■□□□ 1
PTPN7-209ENST00000477554 CRACR2BQ8N4Y2 399 aaPredicted RBP21.32■■□□□ 1
PTPN7-209ENST00000477554 KBTBD3Q8NAB2 608 aa21.32■■□□□ 1
PTPN7-209ENST00000477554 SLC44A5Q8NCS7 719 aa21.32■■□□□ 1
PTPN7-209ENST00000477554 SEC62Q99442 399 aaKnown RBP21.32■■□□□ 1
PTPN7-209ENST00000477554 ARHGAP39Q9C0H5 1083 aa21.32■■□□□ 1
PTPN7-209ENST00000477554 CYP2C8P10632 490 aa21.31■■□□□ 1
PTPN7-209ENST00000477554 SHMT1P34896 483 aa21.31■■□□□ 1
PTPN7-209ENST00000477554 SPP2Q13103 211 aa21.31■■□□□ 1
PTPN7-209ENST00000477554 UBE3CQ15386 1083 aa21.31■■□□□ 1
PTPN7-209ENST00000477554 NOM1Q5C9Z4 860 aaKnown RBP21.31■■□□□ 1
PTPN7-209ENST00000477554 TREML2Q5T2D2 321 aa21.31■■□□□ 1
PTPN7-209ENST00000477554 OTUD7BQ6GQQ9 843 aa21.31■■□□□ 1
PTPN7-209ENST00000477554 GADL1Q6ZQY3 521 aa21.31■■□□□ 1
PTPN7-209ENST00000477554 CRNKL1Q9BZJ0 848 aaKnown RBP21.31■■□□□ 1
PTPN7-209ENST00000477554 MCM9Q9NXL9 1143 aa21.31■■□□□ 1
PTPN7-209ENST00000477554 ADGRA2Q96PE1 1338 aa21.31■■□□□ 1
PTPN7-209ENST00000477554 M0R2C6 588 aa21.3■■□□□ 1
PTPN7-209ENST00000477554 CXCL11O14625 94 aa21.3■■□□□ 1
PTPN7-209ENST00000477554 CTGFP29279 349 aa21.3■■□□□ 1
PTPN7-209ENST00000477554 FOXP4Q8IVH2 680 aaPredicted RBP21.3■■□□□ 1
PTPN7-209ENST00000477554 SMC5Q8IY18 1101 aa21.3■■□□□ 1
PTPN7-209ENST00000477554 GCC1Q96CN9 775 aa21.3■■□□□ 1
PTPN7-209ENST00000477554 DYNLL2Q96FJ2 89 aa21.3■■□□□ 1
PTPN7-209ENST00000477554 GPATCH3Q96I76 525 aa21.3■■□□□ 1
PTPN7-209ENST00000477554 CCDC136Q96JN2 1154 aa21.3■■□□□ 1
PTPN7-209ENST00000477554 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.3■■□□□ 16e-7■■■■□ 19.6
PTPN7-209ENST00000477554 CPA4Q9UI42 421 aa21.3■■□□□ 1
PTPN7-209ENST00000477554 TTC41PQ6P2S7 1318 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms