RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CACNA2D4Q7Z3S7 1137 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 GRAMD1CQ8IYS0 662 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 LINC00301Q8NCQ3 95 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 TGFBRAP1Q8WUH2 860 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 DRC1Q96MC2 740 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 PCDHA5Q9Y5H7 936 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 RPAP1Q9BWH6 1393 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-204ENST00000477421 DIP2AQ14689 1571 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 MYRIPQ8NFW9 859 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 FANCLQ9NW38 375 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 RTL9Q8NET4 1388 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 CUTAO60888 179 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 NLRP12P59046 1061 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 TBC1D10CQ8IV04 446 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 TEX11Q8IYF3 940 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 IQUBQ8NA54 791 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 ZC3H12CQ9C0D7 883 aaKnown RBP12.54□□□□□ -0.4
COL27A1-204ENST00000477421 ADGRB2O60241 1585 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 C1orf167Q5SNV9 1468 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 SLU7O95391 586 aaKnown RBP12.53□□□□□ -0.4
COL27A1-204ENST00000477421 GOLGA8HP0CJ92 632 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 CDC25AP30304 524 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 ADKP55263 362 aaKnown RBP12.53□□□□□ -0.4
COL27A1-204ENST00000477421 RABL6Q3YEC7 729 aaPredicted RBP12.53□□□□□ -0.4
COL27A1-204ENST00000477421 CALML4Q96GE6 196 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 CGNQ9P2M7 1197 aaKnown RBP12.53□□□□□ -0.4
COL27A1-204ENST00000477421 ZMYM6O95789 1325 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 NEURL4Q96JN8 1562 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 KIF23Q02241 960 aaPredicted RBP12.53□□□□□ -0.4
COL27A1-204ENST00000477421 COL9A3Q14050 684 aaPredicted RBP12.53□□□□□ -0.4
COL27A1-204ENST00000477421 POSTNQ15063 836 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 TRERF1Q96PN7 1200 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 SEPT11Q9NVA2 429 aaKnown RBP12.53□□□□□ -0.4
COL27A1-204ENST00000477421 CALM1P0DP23 149 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 CALM2P0DP24 149 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 CALM3P0DP25 149 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 MATR3P43243 847 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL27A1-204ENST00000477421 TMEM266Q2M3C6 531 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 ERFEQ4G0M1 354 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 TTC38Q5R3I4 469 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 FKBP15Q5T1M5 1219 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 DTHD1Q6ZMT9 781 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 ZNF804AQ7Z570 1209 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 RTEL1Q9NZ71 1219 aa12.53□□□□□ -0.4
COL27A1-204ENST00000477421 ZNF609O15014 1411 aa12.52□□□□□ -0.4
COL27A1-204ENST00000477421 NCAPD2Q15021 1401 aa12.52□□□□□ -0.4
COL27A1-204ENST00000477421 SPATA31D1Q6ZQQ2 1576 aa12.52□□□□□ -0.4
COL27A1-204ENST00000477421 ST5P78524 1137 aa12.52□□□□□ -0.4
COL27A1-204ENST00000477421 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.4
COL27A1-204ENST00000477421 SRP68Q9UHB9 627 aaKnown RBP12.52□□□□□ -0.4
COL27A1-204ENST00000477421 PUF60Q9UHX1 559 aaKnown RBP12.52□□□□□ -0.4
COL27A1-204ENST00000477421 SHPRHQ149N8 1683 aa12.52□□□□□ -0.41
COL27A1-204ENST00000477421 KCNQ2O43526 872 aa12.52□□□□□ -0.41
COL27A1-204ENST00000477421 CMA1P23946 247 aa12.52□□□□□ -0.41
COL27A1-204ENST00000477421 RFX5P48382 616 aaPredicted RBP12.52□□□□□ -0.41
COL27A1-204ENST00000477421 SPA17Q15506 151 aa12.52□□□□□ -0.41
COL27A1-204ENST00000477421 LONRF3Q496Y0 759 aa12.52□□□□□ -0.41
COL27A1-204ENST00000477421 TCERG1LQ5VWI1 586 aa12.52□□□□□ -0.41
COL27A1-204ENST00000477421 JAKMIP3Q5VZ66 844 aa12.52□□□□□ -0.41
COL27A1-204ENST00000477421 TMEM87AQ8NBN3 555 aa12.52□□□□□ -0.41
COL27A1-204ENST00000477421 GPKOWQ92917 476 aaPredicted RBP eCLIP12.52□□□□□ -0.41
COL27A1-204ENST00000477421 BAG1Q99933 345 aaPredicted RBP12.52□□□□□ -0.41
COL27A1-204ENST00000477421 GPCPD1Q9NPB8 672 aa12.52□□□□□ -0.41
COL27A1-204ENST00000477421 CYB5R4Q7L1T6 521 aa12.52□□□□□ -0.41
COL27A1-204ENST00000477421 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.52□□□□□ -0.41
COL27A1-204ENST00000477421 STRBPQ96SI9 672 aaKnown RBP12.52□□□□□ -0.41
COL27A1-204ENST00000477421 ANKRD2Q9GZV1 360 aa12.52□□□□□ -0.41
COL27A1-204ENST00000477421 EXOC1Q9NV70 894 aa12.52□□□□□ -0.41
COL27A1-204ENST00000477421 MYO5BQ9ULV0 1848 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 BMP15O95972 392 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 CALML3P27482 149 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 PDLIM2Q96JY6 352 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 CTNND2Q9UQB3 1225 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 NCOA3Q9Y6Q9 1424 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 ATP1A3P13637 1013 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 GSTO1P78417 241 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 UBXN1Q04323 297 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 SLC39A14Q15043 492 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 ZNF397Q8NF99 534 aaPredicted RBP12.51□□□□□ -0.41
COL27A1-204ENST00000477421 ISCA1Q9BUE6 129 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 RAB34Q9BZG1 259 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 CENPHQ9H3R5 247 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 GOLPH3LQ9H4A5 285 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 GNAQP50148 359 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 ARID5AQ03989 594 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 ELF2Q15723 593 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 LRRC8AQ8IWT6 810 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 SLF2Q8IX21 1173 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 SMYD4Q8IYR2 804 aaPredicted RBP12.51□□□□□ -0.41
COL27A1-204ENST00000477421 IGSF22Q8N9C0 903 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 KIAA1524Q8TCG1 905 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 RASGRP4Q8TDF6 673 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 GPR101Q96P66 508 aaPredicted RBP12.51□□□□□ -0.41
COL27A1-204ENST00000477421 DESI2Q9BSY9 194 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 DIP2BQ9P265 1576 aa12.51□□□□□ -0.41
COL27A1-204ENST00000477421 SIGLEC1Q9BZZ2 1709 aa12.5□□□□□ -0.41
COL27A1-204ENST00000477421 PSMA7O14818 248 aa12.5□□□□□ -0.41
COL27A1-204ENST00000477421 ZFYVE27Q5T4F4 411 aa12.5□□□□□ -0.41
COL27A1-204ENST00000477421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL27A1-204ENST00000477421 CCDC148Q8NFR7 591 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms