RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 ARPP21Q9UBL0 812 aaPredicted RBP11.05□□□□□ -0.64
PGK1-204ENST00000477335 CTNNA3Q9UI47 895 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
PGK1-204ENST00000477335 COL2A1P02458 1487 aaPredicted RBP11.05□□□□□ -0.64
PGK1-204ENST00000477335 MYH1P12882 1939 aa11.04□□□□□ -0.64
PGK1-204ENST00000477335 FAM196BA6NMK8 535 aa11.04□□□□□ -0.64
PGK1-204ENST00000477335 ZNF213O14771 459 aa11.04□□□□□ -0.64
PGK1-204ENST00000477335 EIF5BO60841 1220 aaKnown RBP11.04□□□□□ -0.64
PGK1-204ENST00000477335 ENTPD3O75355 529 aa11.04□□□□□ -0.64
PGK1-204ENST00000477335 FGRP09769 529 aa11.04□□□□□ -0.64
PGK1-204ENST00000477335 MCCP23508 829 aa11.04□□□□□ -0.64
PGK1-204ENST00000477335 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
PGK1-204ENST00000477335 ANAPC15P60006 121 aa11.04□□□□□ -0.64
PGK1-204ENST00000477335 GABPAQ06546 454 aa11.04□□□□□ -0.64
PGK1-204ENST00000477335 IMMTQ16891 758 aaKnown RBP11.04□□□□□ -0.64
PGK1-204ENST00000477335 FKBP1CQ5VVH2 108 aa11.04□□□□□ -0.64
PGK1-204ENST00000477335 STAG1Q8WVM7 1258 aa11.04□□□□□ -0.64
PGK1-204ENST00000477335 FAM151AQ8WW52 585 aa11.04□□□□□ -0.64
PGK1-204ENST00000477335 JAKMIP1Q96N16 626 aaKnown RBP11.04□□□□□ -0.64
PGK1-204ENST00000477335 TEPSINQ96N21 525 aa11.04□□□□□ -0.64
PGK1-204ENST00000477335 CD2BP2O95400 341 aaKnown RBP11.03□□□□□ -0.64
PGK1-204ENST00000477335 POLR3DP05423 398 aaPredicted RBP11.03□□□□□ -0.64
PGK1-204ENST00000477335 ANTXR2P58335 489 aa11.03□□□□□ -0.64
PGK1-204ENST00000477335 RASA3Q14644 834 aa11.03□□□□□ -0.64
PGK1-204ENST00000477335 RRP1BQ14684 758 aaKnown RBP11.03□□□□□ -0.64
PGK1-204ENST00000477335 SHROOM1Q2M3G4 852 aaPredicted RBP11.03□□□□□ -0.64
PGK1-204ENST00000477335 PRAMEF18Q5VWM3 479 aa11.03□□□□□ -0.64
PGK1-204ENST00000477335 CYB5R4Q7L1T6 521 aa11.03□□□□□ -0.64
PGK1-204ENST00000477335 MB21D2Q8IYB1 491 aaPredicted RBP11.03□□□□□ -0.64
PGK1-204ENST00000477335 TCEANC2Q96MN5 208 aa11.03□□□□□ -0.64
PGK1-204ENST00000477335 UPF3BQ9BZI7 483 aaKnown RBP11.03□□□□□ -0.64
PGK1-204ENST00000477335 RRAGCQ9HB90 399 aa11.03□□□□□ -0.64
PGK1-204ENST00000477335 NMRK2Q9NPI5 230 aa11.03□□□□□ -0.64
PGK1-204ENST00000477335 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
PGK1-204ENST00000477335 SSC5DA1L4H1 1573 aa11.03□□□□□ -0.64
PGK1-204ENST00000477335 SCN4AP35499 1836 aa11.02□□□□□ -0.64
PGK1-204ENST00000477335 ADM5C9JUS6 153 aa11.02□□□□□ -0.65
PGK1-204ENST00000477335 MYO1BO43795 1136 aa11.02□□□□□ -0.65
PGK1-204ENST00000477335 PRDM1O75626 825 aa11.02□□□□□ -0.65
PGK1-204ENST00000477335 AKNAD1Q5T1N1 836 aa11.02□□□□□ -0.65
PGK1-204ENST00000477335 RNF20Q5VTR2 975 aa11.02□□□□□ -0.65
PGK1-204ENST00000477335 C16orf86Q6ZW13 317 aa11.02□□□□□ -0.65
PGK1-204ENST00000477335 USP50Q70EL3 339 aaPredicted RBP11.02□□□□□ -0.65
PGK1-204ENST00000477335 FAM83AQ86UY5 434 aa11.02□□□□□ -0.65
PGK1-204ENST00000477335 ZNF526Q8TF50 670 aaPredicted RBP11.02□□□□□ -0.65
PGK1-204ENST00000477335 TTC14Q96N46 770 aa11.02□□□□□ -0.65
PGK1-204ENST00000477335 ZSWIM6Q9HCJ5 1215 aa11.02□□□□□ -0.65
PGK1-204ENST00000477335 GPHNQ9NQX3 736 aaPredicted RBP11.02□□□□□ -0.65
PGK1-204ENST00000477335 TMOD2Q9NZR1 351 aa11.02□□□□□ -0.65
PGK1-204ENST00000477335 B4E1Z4 1266 aa11.01□□□□□ -0.65
PGK1-204ENST00000477335 ZKSCAN1P17029 563 aaPredicted RBP11.01□□□□□ -0.65
PGK1-204ENST00000477335 CASTP20810 708 aaKnown RBP11.01□□□□□ -0.65
PGK1-204ENST00000477335 SHMT1P34896 483 aa11.01□□□□□ -0.65
PGK1-204ENST00000477335 CDK8P49336 464 aa11.01□□□□□ -0.65
PGK1-204ENST00000477335 JAG1P78504 1218 aa11.01□□□□□ -0.65
PGK1-204ENST00000477335 EXOSC10Q01780 885 aaKnown RBP11.01□□□□□ -0.65
PGK1-204ENST00000477335 CHST3Q7LGC8 479 aa11.01□□□□□ -0.65
PGK1-204ENST00000477335 METTL16Q86W50 562 aaKnown RBP11.01□□□□□ -0.65
PGK1-204ENST00000477335 DDRGK1Q96HY6 314 aa11.01□□□□□ -0.65
PGK1-204ENST00000477335 NEK1Q96PY6 1258 aa11.01□□□□□ -0.65
PGK1-204ENST00000477335 LRRC2Q9BYS8 371 aa11.01□□□□□ -0.65
PGK1-204ENST00000477335 TM6SF1Q9BZW5 370 aa11.01□□□□□ -0.65
PGK1-204ENST00000477335 DEFB129Q9H1M3 183 aa11.01□□□□□ -0.65
PGK1-204ENST00000477335 CREBZFQ9NS37 354 aa11.01□□□□□ -0.65
PGK1-204ENST00000477335 IQCA1LA6NCM1 817 aa11□□□□□ -0.65
PGK1-204ENST00000477335 ORC4O43929 436 aa11□□□□□ -0.65
PGK1-204ENST00000477335 RASA1P20936 1047 aa11□□□□□ -0.65
PGK1-204ENST00000477335 RPS6KB1P23443 525 aa11□□□□□ -0.65
PGK1-204ENST00000477335 EAPPQ56P03 285 aaPredicted RBP11□□□□□ -0.65
PGK1-204ENST00000477335 FAM47AQ5JRC9 791 aa11□□□□□ -0.65
PGK1-204ENST00000477335 RRP12Q5JTH9 1297 aaKnown RBP11□□□□□ -0.65
PGK1-204ENST00000477335 NBPF12Q5TAG4 269 aaPredicted RBP11□□□□□ -0.65
PGK1-204ENST00000477335 TTC6Q86TZ1 520 aa11□□□□□ -0.65
PGK1-204ENST00000477335 APOBEC3FQ8IUX4 373 aaKnown RBP11□□□□□ -0.65
PGK1-204ENST00000477335 ZSCAN29Q8IWY8 852 aaPredicted RBP11□□□□□ -0.65
PGK1-204ENST00000477335 CSRNP1Q96S65 589 aa11□□□□□ -0.65
PGK1-204ENST00000477335 GNL3Q9BVP2 549 aaKnown RBP eCLIP11□□□□□ -0.65
PGK1-204ENST00000477335 EHD4Q9H223 541 aa11□□□□□ -0.65
PGK1-204ENST00000477335 SENP2Q9HC62 589 aa11□□□□□ -0.65
PGK1-204ENST00000477335 FZD1Q9UP38 647 aa11□□□□□ -0.65
PGK1-204ENST00000477335 PITPNM2Q9BZ72 1349 aa11□□□□□ -0.65
PGK1-204ENST00000477335 KDM4AO75164 1064 aa10.99□□□□□ -0.65
PGK1-204ENST00000477335 PRKAR2AP13861 404 aaKnown RBP10.99□□□□□ -0.65
PGK1-204ENST00000477335 FMR1Q06787 632 aaKnown RBP eCLIP10.99□□□□□ -0.653e-22■■■□□ 15
PGK1-204ENST00000477335 KRT32Q14532 448 aa10.99□□□□□ -0.65
PGK1-204ENST00000477335 RABEP1Q15276 862 aa10.99□□□□□ -0.65
PGK1-204ENST00000477335 MFSD6Q6ZSS7 791 aa10.99□□□□□ -0.65
PGK1-204ENST00000477335 RUFY3Q7L099 469 aa10.99□□□□□ -0.65
PGK1-204ENST00000477335 LARP6Q9BRS8 491 aaKnown RBP10.99□□□□□ -0.65
PGK1-204ENST00000477335 GLIS2Q9BZE0 524 aaPredicted RBP10.99□□□□□ -0.65
PGK1-204ENST00000477335 DHX36Q9H2U1 1008 aaKnown RBP10.99□□□□□ -0.65
PGK1-204ENST00000477335 ZSWIM5Q9P217 1185 aa10.99□□□□□ -0.65
PGK1-204ENST00000477335 PI4KBQ9UBF8 816 aa10.99□□□□□ -0.65
PGK1-204ENST00000477335 SERPINB13Q9UIV8 391 aa10.99□□□□□ -0.65
PGK1-204ENST00000477335 PRC1O43663 620 aa10.98□□□□□ -0.65
PGK1-204ENST00000477335 NMT2O60551 498 aa10.98□□□□□ -0.65
PGK1-204ENST00000477335 HLA-DOAP06340 250 aa10.98□□□□□ -0.65
PGK1-204ENST00000477335 AKR1B1P15121 316 aa10.98□□□□□ -0.65
PGK1-204ENST00000477335 VEGFAP15692 232 aaPredicted RBP10.98□□□□□ -0.65
PGK1-204ENST00000477335 TNNI2P48788 182 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms