RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.01■□□□□ 0.63
COPS3-207ENST00000477299 TACC3Q9Y6A5 838 aa19.01■□□□□ 0.63
COPS3-207ENST00000477299 PHF20L1A8MW92 1017 aa19■□□□□ 0.63
COPS3-207ENST00000477299 MINDY4BA8MYZ0 360 aa19■□□□□ 0.63
COPS3-207ENST00000477299 CDC45O75419 566 aa19■□□□□ 0.63
COPS3-207ENST00000477299 FGAP02671 866 aa19■□□□□ 0.63
COPS3-207ENST00000477299 GNAT2P19087 354 aa19■□□□□ 0.63
COPS3-207ENST00000477299 PPP1R3FQ6ZSY5 799 aaPredicted RBP19■□□□□ 0.63
COPS3-207ENST00000477299 ZKSCAN4Q969J2 545 aaPredicted RBP19■□□□□ 0.63
COPS3-207ENST00000477299 KLRG1Q96E93 195 aa19■□□□□ 0.63
COPS3-207ENST00000477299 ESYT1Q9BSJ8 1104 aa19■□□□□ 0.63
COPS3-207ENST00000477299 DHX36Q9H2U1 1008 aaKnown RBP19■□□□□ 0.63
COPS3-207ENST00000477299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19■□□□□ 0.63
COPS3-207ENST00000477299 INCENPQ9NQS7 918 aa19■□□□□ 0.63
COPS3-207ENST00000477299 PI4KBQ9UBF8 816 aa19■□□□□ 0.63
COPS3-207ENST00000477299 ABT1Q9ULW3 272 aaKnown RBP19■□□□□ 0.63
COPS3-207ENST00000477299 TLL2Q9Y6L7 1015 aa19■□□□□ 0.63
COPS3-207ENST00000477299 TDO2P48775 406 aa18.99■□□□□ 0.63
COPS3-207ENST00000477299 HUNKP57058 714 aa18.99■□□□□ 0.63
COPS3-207ENST00000477299 MAP3K11Q16584 847 aa18.99■□□□□ 0.63
COPS3-207ENST00000477299 LDLRAD1Q5T700 205 aa18.99■□□□□ 0.63
COPS3-207ENST00000477299 PPP1R12BO60237 982 aaPredicted RBP18.98■□□□□ 0.63
COPS3-207ENST00000477299 GABPAQ06546 454 aa18.98■□□□□ 0.63
COPS3-207ENST00000477299 GIMAP6Q6P9H5 292 aa18.98■□□□□ 0.63
COPS3-207ENST00000477299 TTC6Q86TZ1 520 aa18.98■□□□□ 0.63
COPS3-207ENST00000477299 METTL16Q86W50 562 aaKnown RBP18.98■□□□□ 0.63
COPS3-207ENST00000477299 FOXP4Q8IVH2 680 aaPredicted RBP18.98■□□□□ 0.63
COPS3-207ENST00000477299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.98■□□□□ 0.63
COPS3-207ENST00000477299 CNKSR2Q8WXI2 1034 aa18.98■□□□□ 0.63
COPS3-207ENST00000477299 ZNF341Q9BYN7 854 aa18.98■□□□□ 0.63
COPS3-207ENST00000477299 CREBZFQ9NS37 354 aa18.98■□□□□ 0.63
COPS3-207ENST00000477299 ZNF112Q9UJU3 913 aa18.98■□□□□ 0.63
COPS3-207ENST00000477299 PHIPQ8WWQ0 1821 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 DOCK1Q14185 1865 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 TBC1D12O60347 775 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 HLA-DOAP06340 250 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 SHMT1P34896 483 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 MAP3K9P80192 1104 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 CTDSPL2Q05D32 466 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 ALX1Q15699 326 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 SBK1Q52WX2 424 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 DCAF15Q66K64 600 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 ARMC9Q7Z3E5 817 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 CCDC84Q86UT8 332 aaPredicted RBP18.97■□□□□ 0.63
COPS3-207ENST00000477299 NKX2-3Q8TAU0 364 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 RUFY2Q8WXA3 655 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 WRNIP1Q96S55 665 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 NBPF3Q9H094 633 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 NAPBQ9H115 298 aa18.97■□□□□ 0.63
COPS3-207ENST00000477299 LAMA4Q16363 1823 aa18.96■□□□□ 0.63
COPS3-207ENST00000477299 IREB2P48200 963 aaKnown RBP18.96■□□□□ 0.63
COPS3-207ENST00000477299 HAND2P61296 217 aa18.96■□□□□ 0.63
COPS3-207ENST00000477299 VGLL4Q14135 290 aa18.96■□□□□ 0.63
COPS3-207ENST00000477299 CRACR2BQ8N4Y2 399 aaPredicted RBP18.96■□□□□ 0.63
COPS3-207ENST00000477299 LSG1Q9H089 658 aaKnown RBP18.96■□□□□ 0.63
COPS3-207ENST00000477299 ELP3Q9H9T3 547 aa18.96■□□□□ 0.63
COPS3-207ENST00000477299 SERPINB13Q9UIV8 391 aa18.96■□□□□ 0.63
COPS3-207ENST00000477299 RAD50Q92878 1312 aa18.96■□□□□ 0.63
COPS3-207ENST00000477299 GDF11O95390 407 aa18.95■□□□□ 0.62
COPS3-207ENST00000477299 CDK8P49336 464 aa18.95■□□□□ 0.62
COPS3-207ENST00000477299 FKBP1BP68106 108 aa18.95■□□□□ 0.62
COPS3-207ENST00000477299 CYP4F22Q6NT55 531 aa18.95■□□□□ 0.62
COPS3-207ENST00000477299 DDRGK1Q96HY6 314 aa18.95■□□□□ 0.62
COPS3-207ENST00000477299 ZIC5Q96T25 663 aa18.95■□□□□ 0.62
COPS3-207ENST00000477299 NACAP1Q9BZK3 213 aa18.95■□□□□ 0.62
COPS3-207ENST00000477299 EHD4Q9H223 541 aa18.95■□□□□ 0.62
COPS3-207ENST00000477299 ARPP21Q9UBL0 812 aaPredicted RBP18.95■□□□□ 0.62
COPS3-207ENST00000477299 SNCAIPQ9Y6H5 919 aa18.95■□□□□ 0.62
COPS3-207ENST00000477299 PRDM1O75626 825 aa18.94■□□□□ 0.62
COPS3-207ENST00000477299 GJA5P36382 358 aa18.94■□□□□ 0.62
COPS3-207ENST00000477299 MFAP1P55081 439 aaKnown RBP18.94■□□□□ 0.62
COPS3-207ENST00000477299 PPARAQ07869 468 aa18.94■□□□□ 0.62
COPS3-207ENST00000477299 MKRN3Q13064 507 aaKnown RBP18.94■□□□□ 0.62
COPS3-207ENST00000477299 GRM1Q13255 1194 aa18.94■□□□□ 0.62
COPS3-207ENST00000477299 DEFB115Q30KQ5 88 aa18.94■□□□□ 0.62
COPS3-207ENST00000477299 TATDN1Q6P1N9 297 aa18.94■□□□□ 0.62
COPS3-207ENST00000477299 HOOK2Q96ED9 719 aa18.94■□□□□ 0.62
COPS3-207ENST00000477299 DSCC1Q9BVC3 393 aa18.94■□□□□ 0.62
COPS3-207ENST00000477299 HERC5Q9UII4 1024 aaKnown RBP18.94■□□□□ 0.62
COPS3-207ENST00000477299 TAF6LQ9Y6J9 622 aa18.94■□□□□ 0.62
COPS3-207ENST00000477299 RASSF10A6NK89 507 aa18.93■□□□□ 0.62
COPS3-207ENST00000477299 RGMBQ6NW40 437 aa18.93■□□□□ 0.62
COPS3-207ENST00000477299 C16orf86Q6ZW13 317 aa18.93■□□□□ 0.62
COPS3-207ENST00000477299 ANKRD13AQ8IZ07 590 aa18.93■□□□□ 0.62
COPS3-207ENST00000477299 SLC10A4Q96EP9 437 aa18.93■□□□□ 0.62
COPS3-207ENST00000477299 TRIM34Q9BYJ4 488 aa18.93■□□□□ 0.62
COPS3-207ENST00000477299 FAM155AB1AL88 458 aaPredicted RBP18.92■□□□□ 0.62
COPS3-207ENST00000477299 CAP2P40123 477 aa18.92■□□□□ 0.62
COPS3-207ENST00000477299 ZNF157P51786 506 aaPredicted RBP18.92■□□□□ 0.62
COPS3-207ENST00000477299 PAXIP1Q6ZW49 1069 aaPredicted RBP18.92■□□□□ 0.62
COPS3-207ENST00000477299 MAP4K1Q92918 833 aa18.92■□□□□ 0.62
COPS3-207ENST00000477299 AOC2O75106 756 aa18.91■□□□□ 0.62
COPS3-207ENST00000477299 AKR1B1P15121 316 aa18.91■□□□□ 0.62
COPS3-207ENST00000477299 RASAL3Q86YV0 1011 aa18.91■□□□□ 0.62
COPS3-207ENST00000477299 TBC1D10CQ8IV04 446 aa18.91■□□□□ 0.62
COPS3-207ENST00000477299 ANO2Q9NQ90 1003 aa18.91■□□□□ 0.62
COPS3-207ENST00000477299 PTPRFP10586 1907 aa18.91■□□□□ 0.62
COPS3-207ENST00000477299 ROBO3Q96MS0 1386 aa18.91■□□□□ 0.62
COPS3-207ENST00000477299 CTNND1O60716 968 aaKnown RBP18.9■□□□□ 0.62
COPS3-207ENST00000477299 SEC24BO95487 1268 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms