RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 OSBPP22059 807 aa23.27■■□□□ 1.32
GMDS-204ENST00000476972 HOXD10P28358 340 aa23.27■■□□□ 1.32
GMDS-204ENST00000476972 NAA16Q6N069 864 aaPredicted RBP23.27■■□□□ 1.32
GMDS-204ENST00000476972 NDUFB9Q9Y6M9 179 aa23.27■■□□□ 1.32
GMDS-204ENST00000476972 CDK5RAP2Q96SN8 1893 aa23.26■■□□□ 1.31
GMDS-204ENST00000476972 SLURP2P0DP57 97 aa23.26■■□□□ 1.31
GMDS-204ENST00000476972 CYP2C8P10632 490 aa23.26■■□□□ 1.31
GMDS-204ENST00000476972 ZSCAN29Q8IWY8 852 aaPredicted RBP23.26■■□□□ 1.31
GMDS-204ENST00000476972 SCYL3Q8IZE3 742 aa23.26■■□□□ 1.31
GMDS-204ENST00000476972 PICK1Q9NRD5 415 aa23.26■■□□□ 1.31
GMDS-204ENST00000476972 FOCADQ5VW36 1801 aa23.25■■□□□ 1.31
GMDS-204ENST00000476972 DDTLA6NHG4 134 aaPredicted RBP23.25■■□□□ 1.31
GMDS-204ENST00000476972 PTPRAP18433 802 aa23.25■■□□□ 1.31
GMDS-204ENST00000476972 MAP3K10Q02779 954 aa23.25■■□□□ 1.31
GMDS-204ENST00000476972 MTFR1Q15390 333 aa23.25■■□□□ 1.31
GMDS-204ENST00000476972 PARK7Q99497 189 aaKnown RBP23.25■■□□□ 1.31
GMDS-204ENST00000476972 BCL11AQ9H165 835 aa23.25■■□□□ 1.31
GMDS-204ENST00000476972 MAP4K4O95819 1239 aaPredicted RBP23.24■■□□□ 1.31
GMDS-204ENST00000476972 IFIT2P09913 472 aaKnown RBP23.24■■□□□ 1.31
GMDS-204ENST00000476972 ADGRA1Q86SQ6 560 aa23.24■■□□□ 1.31
GMDS-204ENST00000476972 RAET1EQ8TD07 263 aa23.24■■□□□ 1.31
GMDS-204ENST00000476972 NOL10Q9BSC4 688 aaKnown RBP23.24■■□□□ 1.31
GMDS-204ENST00000476972 AFG3L2Q9Y4W6 797 aa23.24■■□□□ 1.31
GMDS-204ENST00000476972 IGSF3O75054 1194 aa23.23■■□□□ 1.31
GMDS-204ENST00000476972 NPM3O75607 178 aaKnown RBP23.23■■□□□ 1.31
GMDS-204ENST00000476972 IDH1O75874 414 aaKnown RBP23.23■■□□□ 1.31
GMDS-204ENST00000476972 BCRP11274 1271 aa23.23■■□□□ 1.31
GMDS-204ENST00000476972 FASTKD5Q7L8L6 764 aaKnown RBP23.23■■□□□ 1.31
GMDS-204ENST00000476972 TEX11Q8IYF3 940 aa23.23■■□□□ 1.31
GMDS-204ENST00000476972 SH3RF3Q8TEJ3 882 aaPredicted RBP23.23■■□□□ 1.31
GMDS-204ENST00000476972 ANTXR1Q9H6X2 564 aa23.23■■□□□ 1.31
GMDS-204ENST00000476972 AATFQ9NY61 560 aaKnown RBP eCLIP23.23■■□□□ 1.31
GMDS-204ENST00000476972 COL2A1P02458 1487 aaPredicted RBP23.23■■□□□ 1.31
GMDS-204ENST00000476972 A0A0G2JLL6 359 aaPredicted RBP23.22■■□□□ 1.31
GMDS-204ENST00000476972 GRK4P32298 578 aa23.22■■□□□ 1.31
GMDS-204ENST00000476972 PRRT2Q7Z6L0 340 aaPredicted RBP23.22■■□□□ 1.31
GMDS-204ENST00000476972 MYPNQ86TC9 1320 aa23.22■■□□□ 1.31
GMDS-204ENST00000476972 CTNND1O60716 968 aaKnown RBP23.21■■□□□ 1.31
GMDS-204ENST00000476972 BAG3O95817 575 aa23.21■■□□□ 1.31
GMDS-204ENST00000476972 LRRCC1Q9C099 1032 aa23.21■■□□□ 1.31
GMDS-204ENST00000476972 DOCK1Q14185 1865 aa23.2■■□□□ 1.3
GMDS-204ENST00000476972 FCGRTP55899 365 aa23.2■■□□□ 1.3
GMDS-204ENST00000476972 PRKCZQ05513 592 aa23.2■■□□□ 1.3
GMDS-204ENST00000476972 GADL1Q6ZQY3 521 aa23.2■■□□□ 1.3
GMDS-204ENST00000476972 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.2■■□□□ 1.3
GMDS-204ENST00000476972 OSBPL5Q9H0X9 879 aaPredicted RBP23.2■■□□□ 1.3
GMDS-204ENST00000476972 BIN2Q9UBW5 565 aaPredicted RBP23.2■■□□□ 1.3
GMDS-204ENST00000476972 COLQQ9Y215 455 aaPredicted RBP23.2■■□□□ 1.3
GMDS-204ENST00000476972 SIPA1L1O43166 1804 aa23.19■■□□□ 1.3
GMDS-204ENST00000476972 H0YGN5 161 aa23.19■■□□□ 1.3
GMDS-204ENST00000476972 PLCG2P16885 1265 aa23.19■■□□□ 1.3
GMDS-204ENST00000476972 CYP7A1P22680 504 aa23.19■■□□□ 1.3
GMDS-204ENST00000476972 PPP4CP60510 307 aa23.19■■□□□ 1.3
GMDS-204ENST00000476972 MAGEB6Q8N7X4 407 aa23.19■■□□□ 1.3
GMDS-204ENST00000476972 SHISA4Q96DD7 197 aa23.19■■□□□ 1.3
GMDS-204ENST00000476972 TRIM75PA6NK02 468 aa23.18■■□□□ 1.3
GMDS-204ENST00000476972 SMARCA5O60264 1052 aaPredicted RBP23.18■■□□□ 1.3
GMDS-204ENST00000476972 CCL5P13501 91 aa23.18■■□□□ 1.3
GMDS-204ENST00000476972 MAP3K12Q12852 859 aa23.18■■□□□ 1.3
GMDS-204ENST00000476972 CCDC84Q86UT8 332 aaPredicted RBP23.18■■□□□ 1.3
GMDS-204ENST00000476972 DNAJC2Q99543 621 aaKnown RBP23.18■■□□□ 1.3
GMDS-204ENST00000476972 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.18■■□□□ 1.3
GMDS-204ENST00000476972 GABRQQ9UN88 632 aa23.18■■□□□ 1.3
GMDS-204ENST00000476972 PCDHB15Q9Y5E8 787 aa23.18■■□□□ 1.3
GMDS-204ENST00000476972 RBBP6Q7Z6E9 1792 aaKnown RBP23.17■■□□□ 1.3
GMDS-204ENST00000476972 GJB1P08034 283 aa23.17■■□□□ 1.3
GMDS-204ENST00000476972 CRBNQ96SW2 442 aa23.17■■□□□ 1.3
GMDS-204ENST00000476972 RNF208Q9H0X6 261 aa23.17■■□□□ 1.3
GMDS-204ENST00000476972 DCTPP1Q9H773 170 aa23.17■■□□□ 1.3
GMDS-204ENST00000476972 SLC45A1Q9Y2W3 748 aa23.17■■□□□ 1.3
GMDS-204ENST00000476972 ZSWIM8A7E2V4 1837 aa23.17■■□□□ 1.3
GMDS-204ENST00000476972 FLT1P17948 1338 aa23.16■■□□□ 1.3
GMDS-204ENST00000476972 TBC1D12O60347 775 aa23.16■■□□□ 1.3
GMDS-204ENST00000476972 GJA8P48165 433 aa23.16■■□□□ 1.3
GMDS-204ENST00000476972 DYNLL1P63167 89 aaKnown RBP23.16■■□□□ 1.3
GMDS-204ENST00000476972 TTF1Q15361 905 aaPredicted RBP23.16■■□□□ 1.3
GMDS-204ENST00000476972 MIGA1Q8NAN2 632 aa23.16■■□□□ 1.3
GMDS-204ENST00000476972 NKX2-3Q8TAU0 364 aa23.16■■□□□ 1.3
GMDS-204ENST00000476972 TGFBRAP1Q8WUH2 860 aa23.16■■□□□ 1.3
GMDS-204ENST00000476972 ATAD5Q96QE3 1844 aa23.15■■□□□ 1.3
GMDS-204ENST00000476972 FAM196BA6NMK8 535 aa23.15■■□□□ 1.3
GMDS-204ENST00000476972 GOLIM4O00461 696 aa23.15■■□□□ 1.3
GMDS-204ENST00000476972 FXR1P51114 621 aaKnown RBP eCLIP23.15■■□□□ 1.3
GMDS-204ENST00000476972 UBXN2AP68543 259 aa23.15■■□□□ 1.3
GMDS-204ENST00000476972 MAPKAPK5Q8IW41 473 aa23.15■■□□□ 1.3
GMDS-204ENST00000476972 SMCR8Q8TEV9 937 aaPredicted RBP23.15■■□□□ 1.3
GMDS-204ENST00000476972 DPF3Q92784 378 aa23.15■■□□□ 1.3
GMDS-204ENST00000476972 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.15■■□□□ 1.3
GMDS-204ENST00000476972 PHIPQ8WWQ0 1821 aa23.15■■□□□ 1.3
GMDS-204ENST00000476972 ATP5JP18859 108 aa23.14■■□□□ 1.29
GMDS-204ENST00000476972 FLT3LGP49771 235 aa23.14■■□□□ 1.29
GMDS-204ENST00000476972 TMED8Q6PL24 325 aaPredicted RBP23.14■■□□□ 1.29
GMDS-204ENST00000476972 SLAIN1Q8ND83 568 aa23.14■■□□□ 1.29
GMDS-204ENST00000476972 EDC3Q96F86 508 aaKnown RBP23.14■■□□□ 1.29
GMDS-204ENST00000476972 BOLA2Q9H3K6 86 aa23.14■■□□□ 1.29
GMDS-204ENST00000476972 CEP290O15078 2479 aa23.14■■□□□ 1.29
GMDS-204ENST00000476972 ADCY3O60266 1144 aa23.13■■□□□ 1.29
GMDS-204ENST00000476972 PDE6AP16499 860 aa23.13■■□□□ 1.29
GMDS-204ENST00000476972 UBE2Q1Q7Z7E8 422 aa23.13■■□□□ 1.29
GMDS-204ENST00000476972 AGTPBP1Q9UPW5 1226 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms