RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 MLLT1Q03111 559 aaPredicted RBP13.63□□□□□ -0.23
PTPRN-213ENST00000476930 RRP1BQ14684 758 aaKnown RBP13.63□□□□□ -0.23
PTPRN-213ENST00000476930 MAPKAPK5Q8IW41 473 aa13.63□□□□□ -0.23
PTPRN-213ENST00000476930 TGFBRAP1Q8WUH2 860 aa13.63□□□□□ -0.23
PTPRN-213ENST00000476930 KIF1BPQ96EK5 621 aa13.63□□□□□ -0.23
PTPRN-213ENST00000476930 EFCC1Q9HA90 598 aa13.63□□□□□ -0.23
PTPRN-213ENST00000476930 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.63□□□□□ -0.23
PTPRN-213ENST00000476930 ZCCHC17Q9NP64 241 aaKnown RBP13.63□□□□□ -0.23
PTPRN-213ENST00000476930 PICK1Q9NRD5 415 aa13.63□□□□□ -0.23
PTPRN-213ENST00000476930 AFG3L2Q9Y4W6 797 aa13.63□□□□□ -0.23
PTPRN-213ENST00000476930 NAV1Q8NEY1 1877 aa13.62□□□□□ -0.23
PTPRN-213ENST00000476930 CXCL11O14625 94 aa13.62□□□□□ -0.23
PTPRN-213ENST00000476930 GPAT2Q6NUI2 795 aa13.62□□□□□ -0.23
PTPRN-213ENST00000476930 ANKRD23Q86SG2 305 aa13.62□□□□□ -0.23
PTPRN-213ENST00000476930 CLASRPQ8N2M8 674 aaKnown RBP13.62□□□□□ -0.23
PTPRN-213ENST00000476930 MAGEB6Q8N7X4 407 aa13.62□□□□□ -0.23
PTPRN-213ENST00000476930 MIGA1Q8NAN2 632 aa13.62□□□□□ -0.23
PTPRN-213ENST00000476930 ARHGAP39Q9C0H5 1083 aa13.62□□□□□ -0.23
PTPRN-213ENST00000476930 PTPN22Q9Y2R2 807 aa13.62□□□□□ -0.23
PTPRN-213ENST00000476930 LOC285556D6RIA3 1793 aa13.62□□□□□ -0.23
PTPRN-213ENST00000476930 MYH8P13535 1937 aa13.62□□□□□ -0.23
PTPRN-213ENST00000476930 BAZ2AQ9UIF9 1905 aaKnown RBP13.62□□□□□ -0.23
PTPRN-213ENST00000476930 FLT1P17948 1338 aa13.62□□□□□ -0.23
PTPRN-213ENST00000476930 RBBP6Q7Z6E9 1792 aaKnown RBP13.61□□□□□ -0.23
PTPRN-213ENST00000476930 ECM2O94769 699 aaPredicted RBP13.61□□□□□ -0.23
PTPRN-213ENST00000476930 PLCG2P16885 1265 aa13.61□□□□□ -0.23
PTPRN-213ENST00000476930 CHMP4BQ9H444 224 aaKnown RBP13.61□□□□□ -0.23
PTPRN-213ENST00000476930 CPA4Q9UI42 421 aa13.61□□□□□ -0.23
PTPRN-213ENST00000476930 A0A0G2JLL6 359 aaPredicted RBP13.6□□□□□ -0.23
PTPRN-213ENST00000476930 TRIM75PA6NK02 468 aa13.6□□□□□ -0.23
PTPRN-213ENST00000476930 IGSF3O75054 1194 aa13.6□□□□□ -0.23
PTPRN-213ENST00000476930 RAB11FIP3O75154 756 aa13.6□□□□□ -0.23
PTPRN-213ENST00000476930 IFIT2P09913 472 aaKnown RBP13.6□□□□□ -0.23
PTPRN-213ENST00000476930 SLC4A8Q2Y0W8 1093 aa13.6□□□□□ -0.23
PTPRN-213ENST00000476930 C17orf99Q6UX52 265 aa13.6□□□□□ -0.23
PTPRN-213ENST00000476930 PRRT2Q7Z6L0 340 aaPredicted RBP13.6□□□□□ -0.23
PTPRN-213ENST00000476930 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
PTPRN-213ENST00000476930 SAP30BPQ9UHR5 308 aaKnown RBP13.6□□□□□ -0.23
PTPRN-213ENST00000476930 PALD1Q9ULE6 856 aa13.6□□□□□ -0.23
PTPRN-213ENST00000476930 ADGRA2Q96PE1 1338 aa13.6□□□□□ -0.23
PTPRN-213ENST00000476930 DDX60LQ5H9U9 1706 aaKnown RBP13.59□□□□□ -0.23
PTPRN-213ENST00000476930 CYP2C8P10632 490 aa13.59□□□□□ -0.23
PTPRN-213ENST00000476930 CTGFP29279 349 aa13.59□□□□□ -0.23
PTPRN-213ENST00000476930 CAP2P40123 477 aa13.59□□□□□ -0.23
PTPRN-213ENST00000476930 JAG1P78504 1218 aa13.59□□□□□ -0.23
PTPRN-213ENST00000476930 LACTBP83111 547 aaPredicted RBP13.59□□□□□ -0.23
PTPRN-213ENST00000476930 MAP3K12Q12852 859 aa13.59□□□□□ -0.23
PTPRN-213ENST00000476930 GADL1Q6ZQY3 521 aa13.59□□□□□ -0.23
PTPRN-213ENST00000476930 EDC3Q96F86 508 aaKnown RBP13.59□□□□□ -0.23
PTPRN-213ENST00000476930 DNAJC2Q99543 621 aaKnown RBP13.59□□□□□ -0.23
PTPRN-213ENST00000476930 DHX36Q9H2U1 1008 aaKnown RBP13.59□□□□□ -0.23
PTPRN-213ENST00000476930 DNAJC18Q9H819 358 aa13.59□□□□□ -0.23
PTPRN-213ENST00000476930 HERC5Q9UII4 1024 aaKnown RBP13.59□□□□□ -0.23
PTPRN-213ENST00000476930 GOLIM4O00461 696 aa13.58□□□□□ -0.24
PTPRN-213ENST00000476930 SMARCA5O60264 1052 aaPredicted RBP13.58□□□□□ -0.24
PTPRN-213ENST00000476930 SHROOM1Q2M3G4 852 aaPredicted RBP13.58□□□□□ -0.24
PTPRN-213ENST00000476930 FASTKD5Q7L8L6 764 aaKnown RBP13.58□□□□□ -0.24
PTPRN-213ENST00000476930 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTPRN-213ENST00000476930 PTCH2Q9Y6C5 1203 aa13.58□□□□□ -0.24
PTPRN-213ENST00000476930 PDE6AP16499 860 aa13.57□□□□□ -0.24
PTPRN-213ENST00000476930 SPP2Q13103 211 aa13.57□□□□□ -0.24
PTPRN-213ENST00000476930 TREML2Q5T2D2 321 aa13.57□□□□□ -0.24
PTPRN-213ENST00000476930 SLC9C2Q5TAH2 1124 aa13.57□□□□□ -0.24
PTPRN-213ENST00000476930 METTL16Q86W50 562 aaKnown RBP13.57□□□□□ -0.24
PTPRN-213ENST00000476930 FOXP4Q8IVH2 680 aaPredicted RBP13.57□□□□□ -0.24
PTPRN-213ENST00000476930 RIOK1Q9BRS2 568 aaKnown RBP13.57□□□□□ -0.24
PTPRN-213ENST00000476930 BOLA2Q9H3K6 86 aa13.57□□□□□ -0.24
PTPRN-213ENST00000476930 BCRP11274 1271 aa13.56□□□□□ -0.24
PTPRN-213ENST00000476930 USP5P45974 858 aa13.56□□□□□ -0.24
PTPRN-213ENST00000476930 KIF22Q14807 665 aa13.56□□□□□ -0.24
PTPRN-213ENST00000476930 ARHGEF6Q15052 776 aa13.56□□□□□ -0.24
PTPRN-213ENST00000476930 TTF1Q15361 905 aaPredicted RBP13.56□□□□□ -0.24
PTPRN-213ENST00000476930 SLFNL1Q499Z3 407 aa13.56□□□□□ -0.24
PTPRN-213ENST00000476930 CRACR2BQ8N4Y2 399 aaPredicted RBP13.56□□□□□ -0.24
PTPRN-213ENST00000476930 ZNF280CQ8ND82 737 aa13.56□□□□□ -0.24
PTPRN-213ENST00000476930 TRIM47Q96LD4 638 aa13.56□□□□□ -0.24
PTPRN-213ENST00000476930 PARK7Q99497 189 aaKnown RBP13.56□□□□□ -0.24
PTPRN-213ENST00000476930 LRRCC1Q9C099 1032 aa13.56□□□□□ -0.24
PTPRN-213ENST00000476930 ZNF532Q9HCE3 1301 aa13.56□□□□□ -0.24
PTPRN-213ENST00000476930 MAGEB6P1A0A0J9YX57 407 aa13.55□□□□□ -0.24
PTPRN-213ENST00000476930 TCRBV5S4A2TA0A5A2 114 aa13.55□□□□□ -0.24
PTPRN-213ENST00000476930 POTEFA5A3E0 1075 aa13.55□□□□□ -0.24
PTPRN-213ENST00000476930 USP17L5A8MUK1 530 aa13.55□□□□□ -0.24
PTPRN-213ENST00000476930 GDF11O95390 407 aa13.55□□□□□ -0.24
PTPRN-213ENST00000476930 ATP5JP18859 108 aa13.55□□□□□ -0.24
PTPRN-213ENST00000476930 PSMC4P43686 418 aa13.55□□□□□ -0.24
PTPRN-213ENST00000476930 HMGCS2P54868 508 aa13.55□□□□□ -0.24
PTPRN-213ENST00000476930 ARMC5Q96C12 935 aa13.55□□□□□ -0.24
PTPRN-213ENST00000476930 PAG1Q9NWQ8 432 aa13.55□□□□□ -0.24
PTPRN-213ENST00000476930 AGTPBP1Q9UPW5 1226 aa13.55□□□□□ -0.24
PTPRN-213ENST00000476930 SLC45A1Q9Y2W3 748 aa13.55□□□□□ -0.24
PTPRN-213ENST00000476930 CHGBP05060 677 aa13.54□□□□□ -0.24
PTPRN-213ENST00000476930 HLA-DOAP06340 250 aa13.54□□□□□ -0.24
PTPRN-213ENST00000476930 EVX2Q03828 476 aa13.54□□□□□ -0.24
PTPRN-213ENST00000476930 TMED8Q6PL24 325 aaPredicted RBP13.54□□□□□ -0.24
PTPRN-213ENST00000476930 CERS3Q8IU89 383 aa13.54□□□□□ -0.24
PTPRN-213ENST00000476930 YTHDC1Q96MU7 727 aaKnown RBP13.54□□□□□ -0.24
PTPRN-213ENST00000476930 HAUS7Q99871 368 aa13.54□□□□□ -0.24
PTPRN-213ENST00000476930 TRIM34Q9BYJ4 488 aa13.54□□□□□ -0.24
PTPRN-213ENST00000476930 DCTPP1Q9H773 170 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms