RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 HDXQ7Z353 690 aa5.44□□□□□ -1.54
NPHP3-207ENST00000476742 TRIM42Q8IWZ5 723 aa5.44□□□□□ -1.54
NPHP3-207ENST00000476742 EZH1Q92800 747 aaPredicted RBP5.44□□□□□ -1.54
NPHP3-207ENST00000476742 BACH2Q9BYV9 841 aa5.44□□□□□ -1.54
NPHP3-207ENST00000476742 ACSS3Q9H6R3 686 aa5.44□□□□□ -1.54
NPHP3-207ENST00000476742 PCDHGC5Q9Y5F6 944 aa5.44□□□□□ -1.54
NPHP3-207ENST00000476742 DCDC2CA8MYV0 355 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 IGLV1-40P01703 118 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 NFICP08651 508 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 VAMP1P23763 118 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 NFIAQ12857 509 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 TTLL4Q14679 1199 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 SMYD4Q8IYR2 804 aaPredicted RBP5.43□□□□□ -1.54
NPHP3-207ENST00000476742 RNF214Q8ND24 703 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 MRRFQ96E11 262 aaKnown RBP5.43□□□□□ -1.54
NPHP3-207ENST00000476742 DBNDD2Q9BQY9 259 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 DISC1Q9NRI5 854 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 GGT7Q9UJ14 662 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 TLR6Q9Y2C9 796 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 DAGLAQ9Y4D2 1042 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 PCDHB5Q9Y5E4 795 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 SNCAIPQ9Y6H5 919 aa5.43□□□□□ -1.54
NPHP3-207ENST00000476742 MINDY4BA8MYZ0 360 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 FANCGO15287 622 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 HCLS1P14317 486 aaPredicted RBP5.42□□□□□ -1.54
NPHP3-207ENST00000476742 TFE3P19532 575 aaPredicted RBP5.42□□□□□ -1.54
NPHP3-207ENST00000476742 LMNB2Q03252 620 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 CAMK2GQ13555 558 aaPredicted RBP5.42□□□□□ -1.54
NPHP3-207ENST00000476742 SEPT6Q14141 434 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 PKN1Q16512 942 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 CDC37L1Q7L3B6 337 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 CCDC84Q86UT8 332 aaPredicted RBP5.42□□□□□ -1.54
NPHP3-207ENST00000476742 C12orf40Q86WS4 652 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 PHC3Q8NDX5 983 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 JARID2Q92833 1246 aaPredicted RBP5.42□□□□□ -1.54
NPHP3-207ENST00000476742 GAL3ST3Q96A11 431 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 TMEM74Q96NL1 305 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 SEMA6CQ9H3T2 930 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 METTL5Q9NRN9 209 aaKnown RBP5.42□□□□□ -1.54
NPHP3-207ENST00000476742 RAPGEFL1Q9UHV5 662 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 PCOLCE2Q9UKZ9 415 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 CSADQ9Y600 493 aa5.42□□□□□ -1.54
NPHP3-207ENST00000476742 F6X3S4 739 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 BPNT1O95861 308 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 PF4P02776 101 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 ZNF76P36508 570 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 PTPN11Q06124 597 aaPredicted RBP5.41□□□□□ -1.54
NPHP3-207ENST00000476742 PPM1JQ5JR12 505 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 WIPI1Q5MNZ9 446 aaPredicted RBP5.41□□□□□ -1.54
NPHP3-207ENST00000476742 SNAP47Q5SQN1 464 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 LRFN4Q6PJG9 635 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 ERMP1Q7Z2K6 904 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 ZDHHC13Q8IUH4 622 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 KCT2Q8NC54 265 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 PLPPR2Q96GM1 343 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 TBC1D32Q96NH3 1257 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 KBTBD4Q9NVX7 518 aa5.41□□□□□ -1.54
NPHP3-207ENST00000476742 PRAMEF27A3QJZ7 478 aa5.4□□□□□ -1.54
NPHP3-207ENST00000476742 SCAMP3O14828 347 aaKnown RBP5.4□□□□□ -1.54
NPHP3-207ENST00000476742 INPP5AQ14642 412 aa5.4□□□□□ -1.54
NPHP3-207ENST00000476742 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.4□□□□□ -1.54
NPHP3-207ENST00000476742 FBXL6Q8N531 539 aa5.4□□□□□ -1.54
NPHP3-207ENST00000476742 RNF34Q969K3 372 aa5.4□□□□□ -1.54
NPHP3-207ENST00000476742 RHOVQ96L33 236 aa5.4□□□□□ -1.54
NPHP3-207ENST00000476742 MFSD14AQ96MC6 490 aa5.4□□□□□ -1.54
NPHP3-207ENST00000476742 LGR6Q9HBX8 967 aa5.4□□□□□ -1.54
NPHP3-207ENST00000476742 ATG3Q9NT62 314 aa5.4□□□□□ -1.54
NPHP3-207ENST00000476742 PRKAG2Q9UGJ0 569 aa5.4□□□□□ -1.54
NPHP3-207ENST00000476742 ETF1P62495 437 aaKnown RBP5.39□□□□□ -1.55
NPHP3-207ENST00000476742 CYP27A1Q02318 531 aa5.39□□□□□ -1.55
NPHP3-207ENST00000476742 RPL6Q02878 288 aaKnown RBP5.39□□□□□ -1.55
NPHP3-207ENST00000476742 RING1Q06587 406 aa5.39□□□□□ -1.55
NPHP3-207ENST00000476742 ZBTB37Q5TC79 503 aa5.39□□□□□ -1.55
NPHP3-207ENST00000476742 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.39□□□□□ -1.55
NPHP3-207ENST00000476742 CYFIP1Q7L576 1253 aa5.39□□□□□ -1.55
NPHP3-207ENST00000476742 ZAR1Q86SH2 424 aa5.39□□□□□ -1.55
NPHP3-207ENST00000476742 GOLM1Q8NBJ4 401 aa5.39□□□□□ -1.55
NPHP3-207ENST00000476742 SHKBP1Q8TBC3 707 aa5.39□□□□□ -1.55
NPHP3-207ENST00000476742 ZNF507Q8TCN5 953 aa5.39□□□□□ -1.55
NPHP3-207ENST00000476742 GATAD2BQ8WXI9 593 aa5.39□□□□□ -1.55
NPHP3-207ENST00000476742 ISL2Q96A47 359 aa5.39□□□□□ -1.55
NPHP3-207ENST00000476742 METTL22Q9BUU2 404 aaPredicted RBP5.39□□□□□ -1.55
NPHP3-207ENST00000476742 OSBPL1AQ9BXW6 950 aa5.39□□□□□ -1.55
NPHP3-207ENST00000476742 TACC3Q9Y6A5 838 aa5.39□□□□□ -1.55
NPHP3-207ENST00000476742 UNCXA6NJT0 531 aa5.38□□□□□ -1.55
NPHP3-207ENST00000476742 WDR64B1ANS9 1081 aa5.38□□□□□ -1.55
NPHP3-207ENST00000476742 RECKO95980 971 aa5.38□□□□□ -1.55
NPHP3-207ENST00000476742 NEFMP07197 916 aa5.38□□□□□ -1.55
NPHP3-207ENST00000476742 EIF4A3P38919 411 aaKnown RBP5.38□□□□□ -1.55
NPHP3-207ENST00000476742 FAM160A1Q05DH4 1040 aa5.38□□□□□ -1.55
NPHP3-207ENST00000476742 PDE4BQ07343 736 aa5.38□□□□□ -1.55
NPHP3-207ENST00000476742 CPSF6Q16630 551 aaKnown RBP eCLIP5.38□□□□□ -1.55
NPHP3-207ENST00000476742 CYP27C1Q4G0S4 372 aa5.38□□□□□ -1.55
NPHP3-207ENST00000476742 LDLRAD1Q5T700 205 aa5.38□□□□□ -1.55
NPHP3-207ENST00000476742 DUSP27Q5VZP5 1158 aa5.38□□□□□ -1.55
NPHP3-207ENST00000476742 BNC2Q6ZN30 1099 aaPredicted RBP5.38□□□□□ -1.55
NPHP3-207ENST00000476742 WNT10AQ9GZT5 417 aa5.38□□□□□ -1.55
NPHP3-207ENST00000476742 COPRSQ9NQ92 184 aa5.38□□□□□ -1.55
NPHP3-207ENST00000476742 SUPT16HQ9Y5B9 1047 aaKnown RBP5.38□□□□□ -1.55
NPHP3-207ENST00000476742 GFRA2O00451 464 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms