RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 ZNF341Q9BYN7 854 aa17.26■□□□□ 0.35
CCNL1-217ENST00000476367 DIAPH3Q9NSV4 1193 aa17.26■□□□□ 0.35
CCNL1-217ENST00000476367 DNAJC5GQ8N7S2 189 aa17.25■□□□□ 0.35
CCNL1-217ENST00000476367 DHX36Q9H2U1 1008 aaKnown RBP17.25■□□□□ 0.35
CCNL1-217ENST00000476367 DCP1AQ9NPI6 582 aaPredicted RBP17.25■□□□□ 0.35
CCNL1-217ENST00000476367 HIP1O00291 1037 aa17.25■□□□□ 0.35
CCNL1-217ENST00000476367 HLA-DOAP06340 250 aa17.25■□□□□ 0.35
CCNL1-217ENST00000476367 ECE1P42892 770 aa17.25■□□□□ 0.35
CCNL1-217ENST00000476367 VGLL4Q14135 290 aa17.25■□□□□ 0.35
CCNL1-217ENST00000476367 LDLRAD1Q5T700 205 aa17.25■□□□□ 0.35
CCNL1-217ENST00000476367 RASAL3Q86YV0 1011 aa17.25■□□□□ 0.35
CCNL1-217ENST00000476367 ANKRD13AQ8IZ07 590 aa17.25■□□□□ 0.35
CCNL1-217ENST00000476367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCNL1-217ENST00000476367 ESYT1Q9BSJ8 1104 aa17.25■□□□□ 0.35
CCNL1-217ENST00000476367 MCM9Q9NXL9 1143 aa17.25■□□□□ 0.35
CCNL1-217ENST00000476367 CCDC171Q6TFL3 1326 aa17.24■□□□□ 0.35
CCNL1-217ENST00000476367 CDC45O75419 566 aa17.24■□□□□ 0.35
CCNL1-217ENST00000476367 INPP5BP32019 993 aa17.24■□□□□ 0.35
CCNL1-217ENST00000476367 CRACR2BQ8N4Y2 399 aaPredicted RBP17.24■□□□□ 0.35
CCNL1-217ENST00000476367 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
CCNL1-217ENST00000476367 ELP3Q9H9T3 547 aa17.24■□□□□ 0.35
CCNL1-217ENST00000476367 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCNL1-217ENST00000476367 PI4KBQ9UBF8 816 aa17.24■□□□□ 0.35
CCNL1-217ENST00000476367 CSADQ9Y600 493 aa17.24■□□□□ 0.35
CCNL1-217ENST00000476367 WDR33Q9C0J8 1336 aaKnown RBP17.24■□□□□ 0.35
CCNL1-217ENST00000476367 POLR3DP05423 398 aaPredicted RBP17.23■□□□□ 0.35
CCNL1-217ENST00000476367 SLC10A3P09131 477 aa17.23■□□□□ 0.35
CCNL1-217ENST00000476367 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
CCNL1-217ENST00000476367 PTH1RQ03431 593 aa17.23■□□□□ 0.35
CCNL1-217ENST00000476367 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
CCNL1-217ENST00000476367 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.23■□□□□ 0.35
CCNL1-217ENST00000476367 DDRGK1Q96HY6 314 aa17.23■□□□□ 0.35
CCNL1-217ENST00000476367 TRIM34Q9BYJ4 488 aa17.23■□□□□ 0.35
CCNL1-217ENST00000476367 ATP8A2Q9NTI2 1148 aa17.23■□□□□ 0.35
CCNL1-217ENST00000476367 AOC2O75106 756 aa17.22■□□□□ 0.35
CCNL1-217ENST00000476367 MAP3K9P80192 1104 aa17.22■□□□□ 0.35
CCNL1-217ENST00000476367 C8orf34Q49A92 452 aa17.22■□□□□ 0.35
CCNL1-217ENST00000476367 LAMA4Q16363 1823 aa17.22■□□□□ 0.35
CCNL1-217ENST00000476367 CYP2D7A0A087X1C5 515 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 FAM155AB1AL88 458 aaPredicted RBP17.21■□□□□ 0.35
CCNL1-217ENST00000476367 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
CCNL1-217ENST00000476367 APPP05067 770 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 CYP2D6P10635 497 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 SLC10A4Q96EP9 437 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 DNAJC18Q9H819 358 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 HERC5Q9UII4 1024 aaKnown RBP17.21■□□□□ 0.35
CCNL1-217ENST00000476367 RAD50Q92878 1312 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 GNAT2P19087 354 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 PLCD1P51178 756 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 TTC6Q86TZ1 520 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 IFNL3Q8IZI9 196 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 CCDC102AQ96A19 550 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 LSG1Q9H089 658 aaKnown RBP17.21■□□□□ 0.35
CCNL1-217ENST00000476367 SNCAIPQ9Y6H5 919 aa17.21■□□□□ 0.35
CCNL1-217ENST00000476367 PHF20L1A8MW92 1017 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 USP17L12C9JPN9 530 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 USP17L21D6R901 530 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 TBC1D12O60347 775 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 FGAP02671 866 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 TDO2P48775 406 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 MAP3K10Q02779 954 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 NOGQ13253 232 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 CTR9Q6PD62 1173 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 AMOTL1Q8IY63 956 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 ZIC5Q96T25 663 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 SERPINB13Q9UIV8 391 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 ZNF112Q9UJU3 913 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 TACC3Q9Y6A5 838 aa17.2■□□□□ 0.34
CCNL1-217ENST00000476367 SEC24BO95487 1268 aa17.19■□□□□ 0.34
CCNL1-217ENST00000476367 ALX1Q15699 326 aa17.19■□□□□ 0.34
CCNL1-217ENST00000476367 GIMAP6Q6P9H5 292 aa17.19■□□□□ 0.34
CCNL1-217ENST00000476367 OPTNQ96CV9 577 aa17.19■□□□□ 0.34
CCNL1-217ENST00000476367 OTUD5Q96G74 571 aa17.19■□□□□ 0.34
CCNL1-217ENST00000476367 WNK4Q96J92 1243 aa17.19■□□□□ 0.34
CCNL1-217ENST00000476367 EHD4Q9H223 541 aa17.19■□□□□ 0.34
CCNL1-217ENST00000476367 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.19■□□□□ 0.34
CCNL1-217ENST00000476367 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
CCNL1-217ENST00000476367 UNCXA6NJT0 531 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 SPRYD7Q5W111 196 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 METTL16Q86W50 562 aaKnown RBP17.18■□□□□ 0.34
CCNL1-217ENST00000476367 FOXP4Q8IVH2 680 aaPredicted RBP17.18■□□□□ 0.34
CCNL1-217ENST00000476367 RUFY2Q8WXA3 655 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 NBPF3Q9H094 633 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 ARPP21Q9UBL0 812 aaPredicted RBP17.18■□□□□ 0.34
CCNL1-217ENST00000476367 GJA5P36382 358 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 GABPAQ06546 454 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 RRP1BQ14684 758 aaKnown RBP17.18■□□□□ 0.34
CCNL1-217ENST00000476367 SCYL3Q8IZE3 742 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 SLC44A5Q8NCS7 719 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 MAP4K1Q92918 833 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 DYNLL2Q96FJ2 89 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 DSCC1Q9BVC3 393 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 NACAP1Q9BZK3 213 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 NAPBQ9H115 298 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 TAF6LQ9Y6J9 622 aa17.18■□□□□ 0.34
CCNL1-217ENST00000476367 PTPRFP10586 1907 aa17.17■□□□□ 0.34
CCNL1-217ENST00000476367 SPDYE5A6NIY4 337 aa17.17■□□□□ 0.34
CCNL1-217ENST00000476367 GDF11O95390 407 aa17.17■□□□□ 0.34
CCNL1-217ENST00000476367 SBK1Q52WX2 424 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms