RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CREB3L3Q68CJ9 461 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 CCDC129Q6ZRS4 1044 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 TRMT1LQ7Z2T5 733 aaKnown RBP12.9□□□□□ -0.34
U2AF1-209ENST00000475639 TMEM139Q8IV31 216 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 RMND1Q9NWS8 449 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 SAMD15Q9P1V8 674 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 SWAP70Q9UH65 585 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 FAM169AQ9Y6X4 670 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 LIG3P49916 1009 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 ESCO1Q5FWF5 840 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 CFAP157Q5JU67 520 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 FBXW10Q5XX13 1052 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 CCDC85AQ96PX6 553 aaPredicted RBP12.89□□□□□ -0.35
U2AF1-209ENST00000475639 ABCB6Q9NP58 842 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 RCOR1Q9UKL0 485 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 TLDC2A0PJX2 215 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 VAV2P52735 878 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 TRAF1Q13077 416 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 CACNA2D3Q8IZS8 1091 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 CLIC6Q96NY7 704 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 IMPG2Q9BZV3 1241 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 RAB21Q9UL25 225 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 SAMM50Q9Y512 469 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 RBM8AQ9Y5S9 174 aaKnown RBP12.89□□□□□ -0.35
U2AF1-209ENST00000475639 EXOC5O00471 708 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 MGEA5O60502 916 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 ATP1A3P13637 1013 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 FAM71BQ8TC56 605 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 ZNF526Q8TF50 670 aaPredicted RBP12.89□□□□□ -0.35
U2AF1-209ENST00000475639 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 MTRF1LQ9UGC7 380 aaKnown RBP12.89□□□□□ -0.35
U2AF1-209ENST00000475639 KRT13P13646 458 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 JAKMIP2Q96AA8 810 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 BPIFA3Q9BQP9 254 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 NUF2Q9BZD4 464 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 TAF6LQ9Y6J9 622 aa12.89□□□□□ -0.35
U2AF1-209ENST00000475639 STARD3NLO95772 234 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 KIF5AQ12840 1032 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 TTF1Q15361 905 aaPredicted RBP12.88□□□□□ -0.35
U2AF1-209ENST00000475639 PTPN21Q16825 1174 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 FCHSD1Q86WN1 690 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 RHPN1Q8TCX5 695 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 BOLA2Q9H3K6 86 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 ZNF652Q9Y2D9 606 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 CTAGE9A4FU28 777 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 ZEB2O60315 1214 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 BMP15O95972 392 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 LMOD1P29536 600 aaPredicted RBP12.88□□□□□ -0.35
U2AF1-209ENST00000475639 FANCCQ00597 558 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 NEDD9Q14511 834 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 ERMNQ8TAM6 284 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 IFT74Q96LB3 600 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 RAB3IPQ96QF0 476 aaPredicted RBP12.88□□□□□ -0.35
U2AF1-209ENST00000475639 LDHCP07864 332 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 UBASH3AP57075 661 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 PIP4K2BP78356 416 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 DPF2Q92785 391 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 HSD3B7Q9H2F3 369 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 PFDN4Q9NQP4 134 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 MIS18AQ9NYP9 233 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 KRT86O43790 486 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 CASP8Q14790 479 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 INF2Q27J81 1249 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 GSTA5Q7RTV2 222 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 LMNTD2Q8IXW0 634 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 SELENOSQ9BQE4 189 aa12.88□□□□□ -0.35
U2AF1-209ENST00000475639 PROSER2Q86WR7 435 aaPredicted RBP12.87□□□□□ -0.35
U2AF1-209ENST00000475639 BICD1Q96G01 975 aa12.87□□□□□ -0.35
U2AF1-209ENST00000475639 CABP1Q9NZU7 370 aa12.87□□□□□ -0.35
U2AF1-209ENST00000475639 USH1CQ9Y6N9 552 aa12.87□□□□□ -0.35
U2AF1-209ENST00000475639 MYH15Q9Y2K3 1946 aa12.87□□□□□ -0.35
U2AF1-209ENST00000475639 ATP7BP35670 1465 aa12.87□□□□□ -0.35
U2AF1-209ENST00000475639 SSH3Q8TE77 659 aa12.87□□□□□ -0.35
U2AF1-209ENST00000475639 PRPF31Q8WWY3 499 aaKnown RBP12.87□□□□□ -0.35
U2AF1-209ENST00000475639 USP28Q96RU2 1077 aa12.87□□□□□ -0.35
U2AF1-209ENST00000475639 PRDM11Q9NQV5 511 aa12.87□□□□□ -0.35
U2AF1-209ENST00000475639 NEDD4P46934 1319 aa12.87□□□□□ -0.35
U2AF1-209ENST00000475639 SRGAP1Q7Z6B7 1085 aa12.87□□□□□ -0.35
U2AF1-209ENST00000475639 FMR1NBQ8N0W7 255 aaPredicted RBP12.87□□□□□ -0.35
U2AF1-209ENST00000475639 MSANTD4Q8NCY6 345 aa12.87□□□□□ -0.35
U2AF1-209ENST00000475639 ARHGAP6O43182 974 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 CUTAO60888 179 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 SCP2P22307 547 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 KRT83P78385 493 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 INTS8Q75QN2 995 aaKnown RBP12.86□□□□□ -0.35
U2AF1-209ENST00000475639 PPP1R12CQ9BZL4 782 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 EXOC1Q9NV70 894 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 KIAA1468Q9P260 1216 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 SLC27A2O14975 620 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 PCK1P35558 622 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 CALCOCO2Q13137 446 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 PSMA7O14818 248 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 TOGARAM2Q6ZUX3 1019 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 SDCCAG8Q86SQ7 713 aaPredicted RBP12.86□□□□□ -0.35
U2AF1-209ENST00000475639 RPAINQ86UA6 219 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 NKIRAS1Q9NYS0 192 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 LRRIQ3A6PVS8 624 aaPredicted RBP12.86□□□□□ -0.35
U2AF1-209ENST00000475639 STMN1P16949 149 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 BICDL1Q6ZP65 573 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms