RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, human

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DOB-208	ENST00000475235	DDTL	A6NHG4	134 aa	Predicted RBP	13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	IRF6	O14896	467 aa		13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	IDH1	O75874	414 aa	Known RBP	13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	SET	Q01105	290 aa	Predicted RBP	13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	MAP3K12	Q12852	859 aa		13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	TTF1	Q15361	905 aa	Predicted RBP	13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	PKN2	Q16513	984 aa	Known RBP	13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	BRI3BP	Q8WY22	251 aa		13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	PTPN18	Q99952	460 aa		13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	ZCCHC17	Q9NP64	241 aa	Known RBP	13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	TBC1D12	O60347	775 aa		13.97	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	SCYL3	Q8IZE3	742 aa		13.97	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.97	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	DHX36	Q9H2U1	1008 aa	Known RBP	13.97	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	PICK1	Q9NRD5	415 aa		13.97	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	AKAP11	Q9UKA4	1901 aa		13.97	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	OTOF	Q9HC10	1997 aa		13.96	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	PHF20L1	A8MW92	1017 aa		13.96	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	CYP7A1	P22680	504 aa		13.96	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	RRP1	P56182	461 aa	Known RBP	13.96	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	CRHR2	Q13324	411 aa		13.96	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	LRRCC1	Q9C099	1032 aa		13.96	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	ZFYVE28	Q9HCC9	887 aa		13.96	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.96	□□□□□ -0.17
HLA-DOB-208	ENST00000475235	CTNND1	O60716	968 aa	Known RBP	13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	MCC	P23508	829 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	ADGRA1	Q86SQ6	560 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	MAGEB6	Q8N7X4	407 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	R3HDML	Q9H3Y0	253 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	ANTXR1	Q9H6X2	564 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	HERC5	Q9UII4	1024 aa	Known RBP	13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	KCNH4	Q9UQ05	1017 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	MYH2	Q9UKX2	1941 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	CCDC85C	A6NKD9	419 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	CXCL11	O14625	94 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	PTMA	P06454	111 aa	Known RBP	13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	PTMS	P20962	102 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	TAF1C	Q15572	869 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	FAM43A	Q8N2R8	423 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	TGFBRAP1	Q8WUH2	860 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	ERO1A	Q96HE7	468 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	PI4KB	Q9UBF8	816 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	NDUFB9	Q9Y6M9	179 aa		13.95	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	MAST2	Q6P0Q8	1798 aa		13.94	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	FLT1	P17948	1338 aa		13.94	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	LAMB1	P07942	1786 aa		13.94	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	PTPRA	P18433	802 aa		13.94	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	BTBD19	C9JJ37	291 aa		13.93	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	ATP5J	P18859	108 aa		13.93	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	SP3	Q02447	781 aa		13.93	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	ANKRD23	Q86SG2	305 aa		13.93	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	MAPKAPK5	Q8IW41	473 aa		13.93	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	BBX	Q8WY36	941 aa	Predicted RBP	13.93	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	DNAJC2	Q99543	621 aa	Known RBP	13.93	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	DCTPP1	Q9H773	170 aa		13.93	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	ZHX2	Q9Y6X8	837 aa		13.93	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	GOLIM4	O00461	696 aa		13.92	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	HLA-DOA	P06340	250 aa		13.92	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	ARHGEF6	Q15052	776 aa		13.92	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	SLC9C2	Q5TAH2	1124 aa		13.92	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	FASTKD5	Q7L8L6	764 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	MIGA1	Q8NAN2	632 aa		13.92	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	TRIM34	Q9BYJ4	488 aa		13.92	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	TBC1D2	Q9BYX2	928 aa		13.92	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	TLR2	O60603	784 aa		13.91	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	USP5	P45974	858 aa		13.91	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	DYNLL1	P63167	89 aa	Known RBP	13.91	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	SECISBP2L	Q93073	1101 aa	Known RBP	13.91	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	GPATCH3	Q96I76	525 aa		13.91	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	PLCD4	Q9BRC7	762 aa		13.91	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	BOLA2	Q9H3K6	86 aa		13.91	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	PAG1	Q9NWQ8	432 aa		13.91	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	RBM19	Q9Y4C8	960 aa	Known RBP	13.91	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	AFG3L2	Q9Y4W6	797 aa		13.91	□□□□□ -0.18
HLA-DOB-208	ENST00000475235		A0A0G2JLL6	359 aa	Predicted RBP	13.9	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	FAM196B	A6NMK8	535 aa		13.9	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	SLURP2	P0DP57	97 aa		13.9	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	PDE6A	P16499	860 aa		13.9	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.9	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	METTL16	Q86W50	562 aa	Known RBP	13.9	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.9	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	HAUS7	Q99871	368 aa		13.9	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	TRIM17	Q9Y577	477 aa		13.9	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	CASP8AP2	Q9UKL3	1982 aa		13.9	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	DOCK2	Q92608	1830 aa		13.9	□□□□□ -0.18
HLA-DOB-208	ENST00000475235	MAGEB6P1	A0A0J9YX57	407 aa		13.9	□□□□□ -0.19
HLA-DOB-208	ENST00000475235	PDHX	O00330	501 aa		13.9	□□□□□ -0.19
HLA-DOB-208	ENST00000475235	CAP2	P40123	477 aa		13.9	□□□□□ -0.19
HLA-DOB-208	ENST00000475235	OTOP1	Q7RTM1	612 aa		13.9	□□□□□ -0.19
HLA-DOB-208	ENST00000475235	CD99L2	Q8TCZ2	262 aa		13.9	□□□□□ -0.19
HLA-DOB-208	ENST00000475235	ZNF592	Q92610	1267 aa		13.9	□□□□□ -0.19
HLA-DOB-208	ENST00000475235	PARK7	Q99497	189 aa	Known RBP	13.9	□□□□□ -0.19
HLA-DOB-208	ENST00000475235	RIOK1	Q9BRS2	568 aa	Known RBP	13.9	□□□□□ -0.19

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