RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 INCENPQ9NQS7 918 aa11.97□□□□□ -0.49
PCCB-213ENST00000475214 GPHNQ9NQX3 736 aaPredicted RBP11.97□□□□□ -0.49
PCCB-213ENST00000475214 MCM9Q9NXL9 1143 aa11.97□□□□□ -0.49
PCCB-213ENST00000475214 BRPF3Q9ULD4 1205 aa11.97□□□□□ -0.49
PCCB-213ENST00000475214 FER1L6Q2WGJ9 1857 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 GAKO14976 1311 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 PTPDC1A2A3K4 754 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 IQCA1LA6NCM1 817 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 CPLX1O14810 134 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 ZBTB43O43298 467 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 TRAK2O60296 914 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 JAK2O60674 1132 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 FGRP09769 529 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 WTAPQ15007 396 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 CPLX2Q6PUV4 134 aaKnown RBP11.96□□□□□ -0.49
PCCB-213ENST00000475214 SGMS1Q86VZ5 419 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 TEX11Q8IYF3 940 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 NSUN7Q8NE18 718 aaKnown RBP11.96□□□□□ -0.49
PCCB-213ENST00000475214 TGFBRAP1Q8WUH2 860 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 DBNDD1Q9H9R9 158 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 LY9Q9HBG7 655 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 MTMR6Q9Y217 621 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 SLC12A7Q9Y666 1083 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 TACC3Q9Y6A5 838 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 LAMB1P07942 1786 aa11.96□□□□□ -0.49
PCCB-213ENST00000475214 CYP2D7A0A087X1C5 515 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 H3BQV1 296 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 ORC4O43929 436 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 ECE2O60344 883 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 RANBP6O60518 1105 aaKnown RBP11.95□□□□□ -0.5
PCCB-213ENST00000475214 CDKL5O76039 1030 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 POLR3DP05423 398 aaPredicted RBP11.95□□□□□ -0.5
PCCB-213ENST00000475214 USP17L8P0C7I0 530 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 METAP2P50579 478 aaKnown RBP eCLIP11.95□□□□□ -0.5
PCCB-213ENST00000475214 KIAA2012Q0VF49 1180 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 C12orf60Q5U649 245 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 STRIP1Q5VSL9 837 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 APOA5Q6Q788 366 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 IQCA1Q86XH1 822 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 DDX11Q96FC9 970 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 NCOA5Q9HCD5 579 aaKnown RBP11.95□□□□□ -0.5
PCCB-213ENST00000475214 TTF2Q9UNY4 1162 aaKnown RBP11.95□□□□□ -0.5
PCCB-213ENST00000475214 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
PCCB-213ENST00000475214 DICER1Q9UPY3 1922 aaKnown RBP11.94□□□□□ -0.5
PCCB-213ENST00000475214 NAV1Q8NEY1 1877 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 USP17L3A6NCW0 530 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 USP17L4A6NCW7 530 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 GOLGA8AA7E2F4 631 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 F8W031 263 aaPredicted RBP11.94□□□□□ -0.5
PCCB-213ENST00000475214 PPIP5K2O43314 1243 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 DTNBO60941 627 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 CTDNEP1O95476 244 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 AOC3Q16853 763 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 HHIPL2Q6UWX4 724 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 USP17L1Q7RTZ2 530 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 MAPKAPK5Q8IW41 473 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 TNS4Q8IZW8 715 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 CERS5Q8N5B7 392 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 NKX2-3Q8TAU0 364 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 JDP2Q8WYK2 163 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 TEKT1Q969V4 418 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 ZSCAN10Q96SZ4 725 aaPredicted RBP11.94□□□□□ -0.5
PCCB-213ENST00000475214 PSMD1Q99460 953 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 ZKSCAN3Q9BRR0 538 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 ZNF287Q9HBT7 754 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 MKRN1Q9UHC7 482 aaKnown RBP11.94□□□□□ -0.5
PCCB-213ENST00000475214 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.94□□□□□ -0.5
PCCB-213ENST00000475214 DAGLAQ9Y4D2 1042 aa11.94□□□□□ -0.5
PCCB-213ENST00000475214 POTECB2RU33 542 aa11.93□□□□□ -0.5
PCCB-213ENST00000475214 PRPF40AO75400 957 aaKnown RBP11.93□□□□□ -0.5
PCCB-213ENST00000475214 CYP2D6P10635 497 aa11.93□□□□□ -0.5
PCCB-213ENST00000475214 IARSP41252 1262 aaKnown RBP11.93□□□□□ -0.5
PCCB-213ENST00000475214 RCAN1P53805 252 aa11.93□□□□□ -0.5
PCCB-213ENST00000475214 RHBDL3P58872 404 aa11.93□□□□□ -0.5
PCCB-213ENST00000475214 CSPP1Q1MSJ5 1256 aa11.93□□□□□ -0.5
PCCB-213ENST00000475214 CCDC178Q5BJE1 867 aa11.93□□□□□ -0.5
PCCB-213ENST00000475214 MRIQ9BWK5 157 aa11.93□□□□□ -0.5
PCCB-213ENST00000475214 VPS33BQ9H267 617 aa11.93□□□□□ -0.5
PCCB-213ENST00000475214 LMBRD1Q9NUN5 540 aa11.93□□□□□ -0.5
PCCB-213ENST00000475214 SNED1Q8TER0 1413 aa11.93□□□□□ -0.5
PCCB-213ENST00000475214 ROBO3Q96MS0 1386 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 TNKSO95271 1327 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 CCDC196A0A1B0GTZ2 297 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 TSPY2A6NKD2 308 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 PRDM1O75626 825 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 DDNO94850 711 aaPredicted RBP11.92□□□□□ -0.5
PCCB-213ENST00000475214 HSPA1AP0DMV8 641 aaKnown RBP11.92□□□□□ -0.5
PCCB-213ENST00000475214 HSPA1BP0DMV9 641 aaKnown RBP11.92□□□□□ -0.5
PCCB-213ENST00000475214 NCLP19338 710 aaKnown RBP11.92□□□□□ -0.5
PCCB-213ENST00000475214 HDLBPQ00341 1268 aaKnown RBP11.92□□□□□ -0.5
PCCB-213ENST00000475214 PPP2R5BQ15173 497 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 DACT2Q5SW24 774 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 IFIT1BQ5T764 474 aaKnown RBP11.92□□□□□ -0.5
PCCB-213ENST00000475214 CDC37L1Q7L3B6 337 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 MICU3Q86XE3 530 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 RAB11FIP4Q86YS3 637 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 ZNF444Q8N0Y2 327 aaPredicted RBP11.92□□□□□ -0.5
PCCB-213ENST00000475214 L3MBTL3Q96JM7 780 aaPredicted RBP11.92□□□□□ -0.5
PCCB-213ENST00000475214 MXD3Q9BW11 206 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 ZSCAN16Q9H4T2 348 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms