RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 DOCK3Q8IZD9 2030 aa17.68■□□□□ 0.42
COL2A1-205ENST00000474996 TMEM57Q8N5G2 664 aa17.68■□□□□ 0.42
COL2A1-205ENST00000474996 LOC285556D6RIA3 1793 aa17.67■□□□□ 0.42
COL2A1-205ENST00000474996 TNPO2O14787 897 aaKnown RBP17.67■□□□□ 0.42
COL2A1-205ENST00000474996 ADCY3O60266 1144 aa17.67■□□□□ 0.42
COL2A1-205ENST00000474996 SPP2Q13103 211 aa17.67■□□□□ 0.42
COL2A1-205ENST00000474996 TEX11Q8IYF3 940 aa17.67■□□□□ 0.42
COL2A1-205ENST00000474996 ANKRD13CQ8N6S4 541 aa17.67■□□□□ 0.42
COL2A1-205ENST00000474996 SH3RF3Q8TEJ3 882 aaPredicted RBP17.67■□□□□ 0.42
COL2A1-205ENST00000474996 UNC93B1Q9H1C4 597 aa17.67■□□□□ 0.42
COL2A1-205ENST00000474996 SNRKQ9NRH2 765 aa17.67■□□□□ 0.42
COL2A1-205ENST00000474996 MAST2Q6P0Q8 1798 aa17.66■□□□□ 0.42
COL2A1-205ENST00000474996 ELNP15502 786 aa17.66■□□□□ 0.42
COL2A1-205ENST00000474996 CAP2P40123 477 aa17.66■□□□□ 0.42
COL2A1-205ENST00000474996 FXR1P51114 621 aaKnown RBP eCLIP17.66■□□□□ 0.42
COL2A1-205ENST00000474996 RRP1BQ14684 758 aaKnown RBP17.66■□□□□ 0.42
COL2A1-205ENST00000474996 ZKSCAN2Q63HK3 967 aa17.66■□□□□ 0.42
COL2A1-205ENST00000474996 DPF3Q92784 378 aa17.66■□□□□ 0.42
COL2A1-205ENST00000474996 MYO5AQ9Y4I1 1855 aaKnown RBP17.66■□□□□ 0.42
COL2A1-205ENST00000474996 SIPA1L1O43166 1804 aa17.65■□□□□ 0.42
COL2A1-205ENST00000474996 CDK5RAP2Q96SN8 1893 aa17.65■□□□□ 0.42
COL2A1-205ENST00000474996 POLA2Q14181 598 aa17.65■□□□□ 0.42
COL2A1-205ENST00000474996 TNNI3KQ59H18 835 aa17.65■□□□□ 0.42
COL2A1-205ENST00000474996 TTC39AQ5SRH9 613 aa17.65■□□□□ 0.42
COL2A1-205ENST00000474996 NAA16Q6N069 864 aaPredicted RBP17.65■□□□□ 0.42
COL2A1-205ENST00000474996 UBE2Q1Q7Z7E8 422 aa17.65■□□□□ 0.42
COL2A1-205ENST00000474996 PROCA1Q8NCQ7 364 aaPredicted RBP17.65■□□□□ 0.42
COL2A1-205ENST00000474996 ZNF280CQ8ND82 737 aa17.65■□□□□ 0.42
COL2A1-205ENST00000474996 U2AF1L4Q8WU68 220 aaKnown RBP17.65■□□□□ 0.42
COL2A1-205ENST00000474996 DBNDD2Q9BQY9 259 aa17.65■□□□□ 0.42
COL2A1-205ENST00000474996 NOL10Q9BSC4 688 aaKnown RBP17.65■□□□□ 0.42
COL2A1-205ENST00000474996 AATFQ9NY61 560 aaKnown RBP eCLIP17.65■□□□□ 0.42
COL2A1-205ENST00000474996 PNMA3Q9UL41 463 aa17.65■□□□□ 0.42
COL2A1-205ENST00000474996 FPGT-TNNI3KV9GXZ4 949 aa17.65■□□□□ 0.42
COL2A1-205ENST00000474996 INHAP05111 366 aa17.64■□□□□ 0.41
COL2A1-205ENST00000474996 HMGCS2P54868 508 aa17.64■□□□□ 0.41
COL2A1-205ENST00000474996 OS9Q13438 667 aaPredicted RBP17.64■□□□□ 0.41
COL2A1-205ENST00000474996 IRF5Q13568 498 aa17.64■□□□□ 0.41
COL2A1-205ENST00000474996 CCDC158Q5M9N0 1113 aa17.64■□□□□ 0.41
COL2A1-205ENST00000474996 GPR108Q9NPR9 543 aa17.64■□□□□ 0.41
COL2A1-205ENST00000474996 HERC5Q9UII4 1024 aaKnown RBP17.64■□□□□ 0.41
COL2A1-205ENST00000474996 TAOK2Q9UL54 1235 aa17.64■□□□□ 0.41
COL2A1-205ENST00000474996 TRIOBPQ9H2D6 2365 aa17.64■□□□□ 0.41
COL2A1-205ENST00000474996 USP17L5A8MUK1 530 aa17.63■□□□□ 0.41
COL2A1-205ENST00000474996 BAG3O95817 575 aa17.63■□□□□ 0.41
COL2A1-205ENST00000474996 ATP8B2P98198 1209 aa17.63■□□□□ 0.41
COL2A1-205ENST00000474996 FAM110CQ1W6H9 321 aa17.63■□□□□ 0.41
COL2A1-205ENST00000474996 SSH3Q8TE77 659 aa17.63■□□□□ 0.41
COL2A1-205ENST00000474996 PXYLP1Q8TE99 480 aa17.63■□□□□ 0.41
COL2A1-205ENST00000474996 COA7Q96BR5 231 aa17.63■□□□□ 0.41
COL2A1-205ENST00000474996 TBC1D2Q9BYX2 928 aa17.63■□□□□ 0.41
COL2A1-205ENST00000474996 C1orf115Q9H7X2 142 aa17.63■□□□□ 0.41
COL2A1-205ENST00000474996 PI4KBQ9UBF8 816 aa17.63■□□□□ 0.41
COL2A1-205ENST00000474996 FOCADQ5VW36 1801 aa17.63■□□□□ 0.41
COL2A1-205ENST00000474996 SURF6O75683 361 aaKnown RBP17.62■□□□□ 0.41
COL2A1-205ENST00000474996 FARP2O94887 1054 aaPredicted RBP17.62■□□□□ 0.41
COL2A1-205ENST00000474996 SGPL1O95470 568 aa17.62■□□□□ 0.41
COL2A1-205ENST00000474996 CYP2E1P05181 493 aaPredicted RBP17.62■□□□□ 0.41
COL2A1-205ENST00000474996 CHRDL2Q6WN34 429 aa17.62■□□□□ 0.41
COL2A1-205ENST00000474996 ADGRA1Q86SQ6 560 aa17.62■□□□□ 0.41
COL2A1-205ENST00000474996 MAPKAPK5Q8IW41 473 aa17.62■□□□□ 0.41
COL2A1-205ENST00000474996 TGFBRAP1Q8WUH2 860 aa17.62■□□□□ 0.41
COL2A1-205ENST00000474996 HTATIP2Q9BUP3 242 aa17.62■□□□□ 0.41
COL2A1-205ENST00000474996 DHX36Q9H2U1 1008 aaKnown RBP17.62■□□□□ 0.41
COL2A1-205ENST00000474996 PLCG2P16885 1265 aa17.61■□□□□ 0.41
COL2A1-205ENST00000474996 PPP4CP60510 307 aa17.61■□□□□ 0.41
COL2A1-205ENST00000474996 PABPC4Q13310 644 aaKnown RBP eCLIP17.61■□□□□ 0.41
COL2A1-205ENST00000474996 SH3D19Q5HYK7 790 aa17.61■□□□□ 0.41
COL2A1-205ENST00000474996 ASCC2Q9H1I8 757 aaPredicted RBP17.61■□□□□ 0.41
COL2A1-205ENST00000474996 AS3MTQ9HBK9 375 aa17.61■□□□□ 0.41
COL2A1-205ENST00000474996 ZAP70P43403 619 aa17.6■□□□□ 0.41
COL2A1-205ENST00000474996 GCLCP48506 637 aaPredicted RBP17.6■□□□□ 0.41
COL2A1-205ENST00000474996 JAG1P78504 1218 aa17.6■□□□□ 0.41
COL2A1-205ENST00000474996 ZNF512BQ96KM6 892 aaPredicted RBP17.6■□□□□ 0.41
COL2A1-205ENST00000474996 DEFB118Q96PH6 123 aa17.6■□□□□ 0.41
COL2A1-205ENST00000474996 DNAJC18Q9H819 358 aa17.6■□□□□ 0.41
COL2A1-205ENST00000474996 PIH1D3Q9NQM4 214 aaKnown RBP17.6■□□□□ 0.41
COL2A1-205ENST00000474996 FLT1P17948 1338 aa17.6■□□□□ 0.41
COL2A1-205ENST00000474996 TFRCP02786 760 aaKnown RBP17.59■□□□□ 0.41
COL2A1-205ENST00000474996 MTMR2Q13614 643 aa17.59■□□□□ 0.41
COL2A1-205ENST00000474996 FTSJ3Q8IY81 847 aaKnown RBP17.59■□□□□ 0.41
COL2A1-205ENST00000474996 WDR18Q9BV38 432 aa17.59■□□□□ 0.41
COL2A1-205ENST00000474996 PAK6Q9NQU5 681 aaPredicted RBP17.59■□□□□ 0.41
COL2A1-205ENST00000474996 TLR7Q9NYK1 1049 aaKnown RBP17.59■□□□□ 0.41
COL2A1-205ENST00000474996 DBNLQ9UJU6 430 aaKnown RBP17.59■□□□□ 0.41
COL2A1-205ENST00000474996 PALD1Q9ULE6 856 aa17.59■□□□□ 0.41
COL2A1-205ENST00000474996 ASNSP08243 561 aa17.58■□□□□ 0.4
COL2A1-205ENST00000474996 SHROOM1Q2M3G4 852 aaPredicted RBP17.58■□□□□ 0.4
COL2A1-205ENST00000474996 FOXP4Q8IVH2 680 aaPredicted RBP17.58■□□□□ 0.4
COL2A1-205ENST00000474996 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.4
COL2A1-205ENST00000474996 CRACR2BQ8N4Y2 399 aaPredicted RBP17.58■□□□□ 0.4
COL2A1-205ENST00000474996 TRIM34Q9BYJ4 488 aa17.58■□□□□ 0.4
COL2A1-205ENST00000474996 CCDC8Q9H0W5 538 aaPredicted RBP17.58■□□□□ 0.4
COL2A1-205ENST00000474996 TMOD4Q9NZQ9 345 aa17.58■□□□□ 0.4
COL2A1-205ENST00000474996 RBM27Q9P2N5 1060 aaKnown RBP17.58■□□□□ 0.4
COL2A1-205ENST00000474996 SAP30BPQ9UHR5 308 aaKnown RBP17.58■□□□□ 0.4
COL2A1-205ENST00000474996 NOP58Q9Y2X3 529 aaKnown RBP17.58■□□□□ 0.4
COL2A1-205ENST00000474996 PLXNB2O15031 1838 aa17.57■□□□□ 0.4
COL2A1-205ENST00000474996 GDF11O95390 407 aa17.57■□□□□ 0.4
COL2A1-205ENST00000474996 RLBP1P12271 317 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms