RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 PROCA1Q8NCQ7 364 aaPredicted RBP17.01■□□□□ 0.31
EPCAM-205ENST00000474691 ZNF280CQ8ND82 737 aa17.01■□□□□ 0.31
EPCAM-205ENST00000474691 ZBTB22O15209 634 aa17■□□□□ 0.31
EPCAM-205ENST00000474691 BAG3O95817 575 aa17■□□□□ 0.31
EPCAM-205ENST00000474691 CCDC84Q86UT8 332 aaPredicted RBP17■□□□□ 0.31
EPCAM-205ENST00000474691 TEX11Q8IYF3 940 aa17■□□□□ 0.31
EPCAM-205ENST00000474691 TMOD4Q9NZQ9 345 aa17■□□□□ 0.31
EPCAM-205ENST00000474691 ATRNL1Q5VV63 1379 aa17■□□□□ 0.31
EPCAM-205ENST00000474691 CENPFP49454 3210 aa17■□□□□ 0.31
EPCAM-205ENST00000474691 MYH2Q9UKX2 1941 aa17■□□□□ 0.31
EPCAM-205ENST00000474691 MKI67P46013 3256 aaKnown RBP16.99■□□□□ 0.31
EPCAM-205ENST00000474691 FAM196BA6NMK8 535 aa16.99■□□□□ 0.31
EPCAM-205ENST00000474691 USP17L5A8MUK1 530 aa16.99■□□□□ 0.31
EPCAM-205ENST00000474691 UQCRFS1P1P0C7P4 283 aa16.99■□□□□ 0.31
EPCAM-205ENST00000474691 HMGCS2P54868 508 aa16.99■□□□□ 0.31
EPCAM-205ENST00000474691 IRX3P78415 501 aaPredicted RBP16.99■□□□□ 0.31
EPCAM-205ENST00000474691 OS9Q13438 667 aaPredicted RBP16.99■□□□□ 0.31
EPCAM-205ENST00000474691 TREML2Q5T2D2 321 aa16.99■□□□□ 0.31
EPCAM-205ENST00000474691 NECAB2Q7Z6G3 386 aa16.99■□□□□ 0.31
EPCAM-205ENST00000474691 CWC22Q9HCG8 908 aaKnown RBP16.99■□□□□ 0.31
EPCAM-205ENST00000474691 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.99■□□□□ 0.31
EPCAM-205ENST00000474691 DOCK2Q92608 1830 aa16.98■□□□□ 0.31
EPCAM-205ENST00000474691 ZBTB7BO15156 539 aaPredicted RBP16.98■□□□□ 0.31
EPCAM-205ENST00000474691 SLURP2P0DP57 97 aa16.98■□□□□ 0.31
EPCAM-205ENST00000474691 PLCG2P16885 1265 aa16.98■□□□□ 0.31
EPCAM-205ENST00000474691 CCDC158Q5M9N0 1113 aa16.98■□□□□ 0.31
EPCAM-205ENST00000474691 TBC1D9Q6ZT07 1266 aa16.98■□□□□ 0.31
EPCAM-205ENST00000474691 CRACR2BQ8N4Y2 399 aaPredicted RBP16.98■□□□□ 0.31
EPCAM-205ENST00000474691 ARHGAP45Q92619 1136 aa16.98■□□□□ 0.31
EPCAM-205ENST00000474691 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
EPCAM-205ENST00000474691 DHX36Q9H2U1 1008 aaKnown RBP16.98■□□□□ 0.31
EPCAM-205ENST00000474691 HMX1Q9NP08 348 aaPredicted RBP16.98■□□□□ 0.31
EPCAM-205ENST00000474691 HMG20BQ9P0W2 317 aa16.98■□□□□ 0.31
EPCAM-205ENST00000474691 HERC5Q9UII4 1024 aaKnown RBP16.98■□□□□ 0.31
EPCAM-205ENST00000474691 HMGCRP04035 888 aa16.97■□□□□ 0.31
EPCAM-205ENST00000474691 GNAI2P04899 355 aa16.97■□□□□ 0.31
EPCAM-205ENST00000474691 CAP2P40123 477 aa16.97■□□□□ 0.31
EPCAM-205ENST00000474691 RHBDL3P58872 404 aa16.97■□□□□ 0.31
EPCAM-205ENST00000474691 TTC39AQ5SRH9 613 aa16.97■□□□□ 0.31
EPCAM-205ENST00000474691 UBE2Q1Q7Z7E8 422 aa16.97■□□□□ 0.31
EPCAM-205ENST00000474691 FRAT1Q92837 279 aaPredicted RBP16.97■□□□□ 0.31
EPCAM-205ENST00000474691 PAWRQ96IZ0 340 aaKnown RBP16.97■□□□□ 0.31
EPCAM-205ENST00000474691 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.97■□□□□ 0.31
EPCAM-205ENST00000474691 PI4KBQ9UBF8 816 aa16.97■□□□□ 0.31
EPCAM-205ENST00000474691 RARSP54136 660 aaKnown RBP16.96■□□□□ 0.31
EPCAM-205ENST00000474691 NAA16Q6N069 864 aaPredicted RBP16.96■□□□□ 0.31
EPCAM-205ENST00000474691 RFX7Q2KHR2 1363 aa16.96■□□□□ 0.31
EPCAM-205ENST00000474691 A0A1W2PPC1 479 aa16.95■□□□□ 0.3
EPCAM-205ENST00000474691 PDE3AQ14432 1141 aa16.95■□□□□ 0.3
EPCAM-205ENST00000474691 PI16Q6UXB8 463 aa16.95■□□□□ 0.3
EPCAM-205ENST00000474691 ATF7IPQ6VMQ6 1270 aa16.95■□□□□ 0.3
EPCAM-205ENST00000474691 ASCC2Q9H1I8 757 aaPredicted RBP16.95■□□□□ 0.3
EPCAM-205ENST00000474691 PAK6Q9NQU5 681 aaPredicted RBP16.95■□□□□ 0.3
EPCAM-205ENST00000474691 AATFQ9NY61 560 aaKnown RBP eCLIP16.95■□□□□ 0.3
EPCAM-205ENST00000474691 RPTORQ8N122 1335 aa16.95■□□□□ 0.3
EPCAM-205ENST00000474691 HLA-DOAP06340 250 aa16.94■□□□□ 0.3
EPCAM-205ENST00000474691 ASNSP08243 561 aa16.94■□□□□ 0.3
EPCAM-205ENST00000474691 ARID4AP29374 1257 aaPredicted RBP16.94■□□□□ 0.3
EPCAM-205ENST00000474691 MTX1Q13505 466 aa16.94■□□□□ 0.3
EPCAM-205ENST00000474691 TRMT2AQ8IZ69 625 aaKnown RBP16.94■□□□□ 0.3
EPCAM-205ENST00000474691 ANKLE1Q8NAG6 615 aa16.94■□□□□ 0.3
EPCAM-205ENST00000474691 NUDT12Q9BQG2 462 aa16.94■□□□□ 0.3
EPCAM-205ENST00000474691 MGAMO43451 1857 aa16.94■□□□□ 0.3
EPCAM-205ENST00000474691 DOCK1Q14185 1865 aa16.94■□□□□ 0.3
EPCAM-205ENST00000474691 C19orf81C9J6K1 198 aa16.93■□□□□ 0.3
EPCAM-205ENST00000474691 CYP2B6P20813 491 aa16.93■□□□□ 0.3
EPCAM-205ENST00000474691 MTMR2Q13614 643 aa16.93■□□□□ 0.3
EPCAM-205ENST00000474691 FOXP4Q8IVH2 680 aaPredicted RBP16.93■□□□□ 0.3
EPCAM-205ENST00000474691 C7orf61Q8IZ16 206 aa16.93■□□□□ 0.3
EPCAM-205ENST00000474691 SH3RF3Q8TEJ3 882 aaPredicted RBP16.93■□□□□ 0.3
EPCAM-205ENST00000474691 TGFBRAP1Q8WUH2 860 aa16.93■□□□□ 0.3
EPCAM-205ENST00000474691 NBPF3Q9H094 633 aa16.93■□□□□ 0.3
EPCAM-205ENST00000474691 STAP2Q9UGK3 403 aa16.93■□□□□ 0.3
EPCAM-205ENST00000474691 MCAMP43121 646 aa16.92■□□□□ 0.3
EPCAM-205ENST00000474691 BACE1P56817 501 aa16.92■□□□□ 0.3
EPCAM-205ENST00000474691 SH3D19Q5HYK7 790 aa16.92■□□□□ 0.3
EPCAM-205ENST00000474691 MAPKAPK5Q8IW41 473 aa16.92■□□□□ 0.3
EPCAM-205ENST00000474691 SLC17A8Q8NDX2 589 aa16.92■□□□□ 0.3
EPCAM-205ENST00000474691 GPRC5AQ8NFJ5 357 aa16.92■□□□□ 0.3
EPCAM-205ENST00000474691 CLUAP1Q96AJ1 413 aa16.92■□□□□ 0.3
EPCAM-205ENST00000474691 CRISPLD2Q9H0B8 497 aa16.92■□□□□ 0.3
EPCAM-205ENST00000474691 C11orf49Q9H6J7 331 aa16.92■□□□□ 0.3
EPCAM-205ENST00000474691 SNRKQ9NRH2 765 aa16.92■□□□□ 0.3
EPCAM-205ENST00000474691 USP17L10C9JJH3 530 aa16.91■□□□□ 0.3
EPCAM-205ENST00000474691 TRMT44Q8IYL2 757 aaKnown RBP16.91■□□□□ 0.3
EPCAM-205ENST00000474691 GTF3C2Q8WUA4 911 aaPredicted RBP16.91■□□□□ 0.3
EPCAM-205ENST00000474691 SOCS4Q8WXH5 440 aa16.91■□□□□ 0.3
EPCAM-205ENST00000474691 WDR18Q9BV38 432 aa16.91■□□□□ 0.3
EPCAM-205ENST00000474691 GINM1Q9NU53 330 aa16.91■□□□□ 0.3
EPCAM-205ENST00000474691 BRCA2P51587 3418 aa16.91■□□□□ 0.3
EPCAM-205ENST00000474691 COL2A1P02458 1487 aaPredicted RBP16.91■□□□□ 0.3
EPCAM-205ENST00000474691 TRIOBPQ9H2D6 2365 aa16.91■□□□□ 0.3
EPCAM-205ENST00000474691 MAPK4P31152 587 aa16.9■□□□□ 0.3
EPCAM-205ENST00000474691 DIS3LQ8TF46 1054 aaKnown RBP16.9■□□□□ 0.3
EPCAM-205ENST00000474691 ZMYND8Q9ULU4 1186 aaPredicted RBP16.9■□□□□ 0.3
EPCAM-205ENST00000474691 GDF11O95390 407 aa16.89■□□□□ 0.29
EPCAM-205ENST00000474691 ZKSCAN1P17029 563 aaPredicted RBP16.89■□□□□ 0.29
EPCAM-205ENST00000474691 ZNF384Q8TF68 577 aa16.89■□□□□ 0.29
EPCAM-205ENST00000474691 P2RX7Q99572 595 aaKnown RBP16.89■□□□□ 0.29
EPCAM-205ENST00000474691 FEZ1Q99689 392 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms