RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 LTBP1Q14766 1721 aa25.28■■□□□ 1.64
CCM2-206ENST00000474617 FAM205AQ6ZU69 1335 aa25.28■■□□□ 1.64
CCM2-206ENST00000474617 USP17L12C9JPN9 530 aa25.27■■□□□ 1.64
CCM2-206ENST00000474617 USP17L21D6R901 530 aa25.27■■□□□ 1.64
CCM2-206ENST00000474617 PPEF1O14829 653 aaPredicted RBP25.27■■□□□ 1.64
CCM2-206ENST00000474617 DEXIO95424 95 aa25.27■■□□□ 1.64
CCM2-206ENST00000474617 CDC27P30260 824 aa25.27■■□□□ 1.64
CCM2-206ENST00000474617 FANCBQ8NB91 859 aa25.27■■□□□ 1.64
CCM2-206ENST00000474617 CLSTN2Q9H4D0 955 aa25.27■■□□□ 1.64
CCM2-206ENST00000474617 DLEC1Q9Y238 1755 aa25.27■■□□□ 1.64
CCM2-206ENST00000474617 SAFBQ15424 915 aaKnown RBP eCLIP25.27■■□□□ 1.64
CCM2-206ENST00000474617 MYSM1Q5VVJ2 828 aa25.27■■□□□ 1.64
CCM2-206ENST00000474617 TBC1D16Q8TBP0 767 aa25.27■■□□□ 1.64
CCM2-206ENST00000474617 USP28Q96RU2 1077 aa25.27■■□□□ 1.64
CCM2-206ENST00000474617 RNF26Q9BY78 433 aaPredicted RBP25.27■■□□□ 1.64
CCM2-206ENST00000474617 MROH7-TTC4A0A0A0MT08 1334 aa25.26■■□□□ 1.63
CCM2-206ENST00000474617 XBP1P17861 261 aa25.26■■□□□ 1.63
CCM2-206ENST00000474617 IFIT1BQ5T764 474 aaKnown RBP25.26■■□□□ 1.63
CCM2-206ENST00000474617 CCDC73Q6ZRK6 1079 aa25.26■■□□□ 1.63
CCM2-206ENST00000474617 JMYQ8N9B5 988 aa25.26■■□□□ 1.63
CCM2-206ENST00000474617 PGBD1Q96JS3 809 aa25.26■■□□□ 1.63
CCM2-206ENST00000474617 PDLIM2Q96JY6 352 aa25.26■■□□□ 1.63
CCM2-206ENST00000474617 FUCA2Q9BTY2 467 aa25.26■■□□□ 1.63
CCM2-206ENST00000474617 COA1Q9GZY4 146 aa25.26■■□□□ 1.63
CCM2-206ENST00000474617 TNMDQ9H2S6 317 aa25.26■■□□□ 1.63
CCM2-206ENST00000474617 U2AF2P26368 475 aaKnown RBP eCLIP25.25■■□□□ 1.63
CCM2-206ENST00000474617 ADALQ6DHV7 355 aa25.25■■□□□ 1.63
CCM2-206ENST00000474617 ILDR1Q86SU0 546 aaPredicted RBP25.25■■□□□ 1.63
CCM2-206ENST00000474617 INCENPQ9NQS7 918 aa25.25■■□□□ 1.63
CCM2-206ENST00000474617 DACT1Q9NYF0 836 aa25.25■■□□□ 1.63
CCM2-206ENST00000474617 PARP3Q9Y6F1 533 aa25.25■■□□□ 1.63
CCM2-206ENST00000474617 KRT40Q6A162 431 aa25.24■■□□□ 1.63
CCM2-206ENST00000474617 NKX2-3Q8TAU0 364 aa25.24■■□□□ 1.63
CCM2-206ENST00000474617 MAP3K14Q99558 947 aa25.24■■□□□ 1.63
CCM2-206ENST00000474617 SENP2Q9HC62 589 aa25.24■■□□□ 1.63
CCM2-206ENST00000474617 MKRN1Q9UHC7 482 aaKnown RBP25.24■■□□□ 1.63
CCM2-206ENST00000474617 BAZ2AQ9UIF9 1905 aaKnown RBP25.23■■□□□ 1.63
CCM2-206ENST00000474617 RANBP6O60518 1105 aaKnown RBP25.23■■□□□ 1.63
CCM2-206ENST00000474617 SRGNP10124 158 aa25.23■■□□□ 1.63
CCM2-206ENST00000474617 LIG1P18858 919 aa25.23■■□□□ 1.63
CCM2-206ENST00000474617 USP5P45974 858 aa25.23■■□□□ 1.63
CCM2-206ENST00000474617 GUCY1B3Q02153 619 aa25.23■■□□□ 1.63
CCM2-206ENST00000474617 GNL2Q13823 731 aaKnown RBP25.23■■□□□ 1.63
CCM2-206ENST00000474617 ZNF827Q17R98 1081 aa25.23■■□□□ 1.63
CCM2-206ENST00000474617 COL23A1Q86Y22 540 aaPredicted RBP25.23■■□□□ 1.63
CCM2-206ENST00000474617 CRACR2BQ8N4Y2 399 aaPredicted RBP25.23■■□□□ 1.63
CCM2-206ENST00000474617 ENAHQ8N8S7 591 aaPredicted RBP25.23■■□□□ 1.63
CCM2-206ENST00000474617 LINC00301Q8NCQ3 95 aa25.23■■□□□ 1.63
CCM2-206ENST00000474617 SLC26A6Q9BXS9 759 aa25.23■■□□□ 1.63
CCM2-206ENST00000474617 ANKRD31Q8N7Z5 1873 aa25.23■■□□□ 1.63
CCM2-206ENST00000474617 AKAP17AQ02040 695 aaKnown RBP25.22■■□□□ 1.63
CCM2-206ENST00000474617 STK38Q15208 465 aa25.22■■□□□ 1.63
CCM2-206ENST00000474617 GPR75-ASB3A0A0A6YYF3 556 aa25.22■■□□□ 1.63
CCM2-206ENST00000474617 ME1P48163 572 aa25.22■■□□□ 1.63
CCM2-206ENST00000474617 FAM160A1Q05DH4 1040 aa25.22■■□□□ 1.63
CCM2-206ENST00000474617 SF3A1Q15459 793 aaKnown RBP25.22■■□□□ 1.63
CCM2-206ENST00000474617 C12orf60Q5U649 245 aa25.22■■□□□ 1.63
CCM2-206ENST00000474617 MASTLQ96GX5 879 aa25.22■■□□□ 1.63
CCM2-206ENST00000474617 FOXP1Q9H334 677 aaPredicted RBP25.22■■□□□ 1.63
CCM2-206ENST00000474617 MCM9Q9NXL9 1143 aa25.22■■□□□ 1.63
CCM2-206ENST00000474617 FOSBP53539 338 aa25.21■■□□□ 1.63
CCM2-206ENST00000474617 ANO1Q5XXA6 986 aa25.21■■□□□ 1.63
CCM2-206ENST00000474617 RAB11FIP4Q86YS3 637 aa25.21■■□□□ 1.63
CCM2-206ENST00000474617 ANKS1AQ92625 1134 aa25.21■■□□□ 1.63
CCM2-206ENST00000474617 PHKBQ93100 1093 aa25.21■■□□□ 1.63
CCM2-206ENST00000474617 TNS1Q9HBL0 1735 aaKnown RBP25.21■■□□□ 1.63
CCM2-206ENST00000474617 SPTLC2O15270 562 aa25.2■■□□□ 1.62
CCM2-206ENST00000474617 NBPF11Q86T75 865 aa25.2■■□□□ 1.62
CCM2-206ENST00000474617 DGKHQ86XP1 1220 aa25.2■■□□□ 1.62
CCM2-206ENST00000474617 CCAR1Q8IX12 1150 aaKnown RBP25.2■■□□□ 1.62
CCM2-206ENST00000474617 MRPS27Q92552 414 aaKnown RBP25.2■■□□□ 1.62
CCM2-206ENST00000474617 EYA3Q99504 573 aa25.2■■□□□ 1.62
CCM2-206ENST00000474617 TCP11L1Q9NUJ3 509 aa25.2■■□□□ 1.62
CCM2-206ENST00000474617 POLLQ9UGP5 575 aa25.2■■□□□ 1.62
CCM2-206ENST00000474617 GAKO14976 1311 aa25.2■■□□□ 1.62
CCM2-206ENST00000474617 C6orf229H3BNL8 230 aa25.19■■□□□ 1.62
CCM2-206ENST00000474617 KINO60870 393 aaKnown RBP25.19■■□□□ 1.62
CCM2-206ENST00000474617 PPP6R2O75170 966 aa25.19■■□□□ 1.62
CCM2-206ENST00000474617 RXRAP19793 462 aa25.19■■□□□ 1.62
CCM2-206ENST00000474617 ZKSCAN3Q9BRR0 538 aa25.19■■□□□ 1.62
CCM2-206ENST00000474617 RTFDC1Q9BY42 306 aaPredicted RBP25.19■■□□□ 1.62
CCM2-206ENST00000474617 MORC2Q9Y6X9 1032 aaPredicted RBP25.19■■□□□ 1.62
CCM2-206ENST00000474617 PRPF3O43395 683 aaKnown RBP25.18■■□□□ 1.62
CCM2-206ENST00000474617 MMP1P03956 469 aa25.18■■□□□ 1.62
CCM2-206ENST00000474617 KIF5BP33176 963 aa25.18■■□□□ 1.62
CCM2-206ENST00000474617 SLC39A14Q15043 492 aa25.18■■□□□ 1.62
CCM2-206ENST00000474617 CCDC144CPQ8IYA2 1237 aa25.18■■□□□ 1.62
CCM2-206ENST00000474617 FAM177A1Q8N128 213 aaPredicted RBP25.18■■□□□ 1.62
CCM2-206ENST00000474617 MYL10Q9BUA6 226 aa25.18■■□□□ 1.62
CCM2-206ENST00000474617 ECM29Q5VYK3 1845 aa25.18■■□□□ 1.62
CCM2-206ENST00000474617 NAV1Q8NEY1 1877 aa25.17■■□□□ 1.62
CCM2-206ENST00000474617 NR1I2O75469 434 aa25.17■■□□□ 1.62
CCM2-206ENST00000474617 TROAPQ12815 778 aa25.17■■□□□ 1.62
CCM2-206ENST00000474617 MFSD14BQ5SR56 506 aa25.17■■□□□ 1.62
CCM2-206ENST00000474617 MPNDQ8N594 471 aa25.17■■□□□ 1.62
CCM2-206ENST00000474617 CTCFLQ8NI51 663 aaPredicted RBP25.17■■□□□ 1.62
CCM2-206ENST00000474617 NUP133Q8WUM0 1156 aa25.17■■□□□ 1.62
CCM2-206ENST00000474617 ZC3H12CQ9C0D7 883 aaKnown RBP25.17■■□□□ 1.62
CCM2-206ENST00000474617 MYH2Q9UKX2 1941 aa25.17■■□□□ 1.62
CCM2-206ENST00000474617 TSPY2A6NKD2 308 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms