RNA–Protein interactions for RNA: ENST00000474496.5

TRAF3IP3-210, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 4

Gene TRAF3IP3, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-210ENST00000474496 ZNF213O14771 459 aa12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 REC8O95072 547 aa12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 FGAP02671 866 aa12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 PLCD1P51178 756 aa12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 APLP1P51693 650 aa12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 HAND2P61296 217 aa12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 C12orf60Q5U649 245 aa12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 FOXP4Q8IVH2 680 aaPredicted RBP12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 WRNIP1Q96S55 665 aa12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 DSCC1Q9BVC3 393 aa12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 IL25Q9H293 177 aa12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 ZNF287Q9HBT7 754 aa12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 HERC5Q9UII4 1024 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 CSADQ9Y600 493 aa12.66□□□□□ -0.38
TRAF3IP3-210ENST00000474496 COL2A1P02458 1487 aaPredicted RBP12.65□□□□□ -0.38
TRAF3IP3-210ENST00000474496 PASKQ96RG2 1323 aa12.65□□□□□ -0.38
TRAF3IP3-210ENST00000474496 UBE2Q2LH0YL09 131 aa12.65□□□□□ -0.38
TRAF3IP3-210ENST00000474496 MPHOSPH10O00566 681 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP3-210ENST00000474496 HUNKP57058 714 aa12.65□□□□□ -0.38
TRAF3IP3-210ENST00000474496 C1QTNF8P60827 252 aa12.65□□□□□ -0.38
TRAF3IP3-210ENST00000474496 PDE4BQ07343 736 aa12.65□□□□□ -0.38
TRAF3IP3-210ENST00000474496 PPARAQ07869 468 aa12.65□□□□□ -0.38
TRAF3IP3-210ENST00000474496 MOB2Q70IA6 237 aa12.65□□□□□ -0.38
TRAF3IP3-210ENST00000474496 DYNLL2Q96FJ2 89 aa12.65□□□□□ -0.38
TRAF3IP3-210ENST00000474496 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
TRAF3IP3-210ENST00000474496 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
TRAF3IP3-210ENST00000474496 BAZ2AQ9UIF9 1905 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 SLURP2P0DP57 97 aa12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 FKBP1BP68106 108 aa12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 PTH1RQ03431 593 aa12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 CTDSPL2Q05D32 466 aa12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 GRM1Q13255 1194 aa12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 ALX1Q15699 326 aa12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 SBK1Q52WX2 424 aa12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 RRP12Q5JTH9 1297 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 CST9Q5W186 159 aa12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 ANKRD13AQ8IZ07 590 aa12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 ZNF444Q8N0Y2 327 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 EHD4Q9H223 541 aa12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 PICK1Q9NRD5 415 aa12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 MKRN1Q9UHC7 482 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP3-210ENST00000474496 TBC1D12O60347 775 aa12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 USP2O75604 605 aaPredicted RBP12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 GDF11O95390 407 aa12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 MCCP23508 829 aa12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 MAP3K9P80192 1104 aa12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 EVX2Q03828 476 aa12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 RNF20Q5VTR2 975 aa12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 MFSD6Q6ZSS7 791 aa12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 CABP5Q9NP86 173 aa12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 RBM8AQ9Y5S9 174 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 SSC5DA1L4H1 1573 aa12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 PAPPA2Q9BXP8 1791 aa12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 TRPM7Q96QT4 1865 aa12.63□□□□□ -0.39
TRAF3IP3-210ENST00000474496 ZMYM6O95789 1325 aa12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 LAMB1P07942 1786 aa12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 FOXP2O15409 715 aa12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 PRDM1O75626 825 aa12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 CDK8P49336 464 aa12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 ZNF157P51786 506 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 TRDNQ13061 729 aa12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 SLC44A5Q8NCS7 719 aa12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 MAP4K1Q92918 833 aa12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 ZKSCAN4Q969J2 545 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 KLRG1Q96E93 195 aa12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 SLC10A4Q96EP9 437 aa12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 LSG1Q9H089 658 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 RNF41Q9H4P4 317 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 ELP3Q9H9T3 547 aa12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 CREBZFQ9NS37 354 aa12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 DDX60LQ5H9U9 1706 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP3-210ENST00000474496 SMIM22K7EJ46 135 aa12.61□□□□□ -0.39
TRAF3IP3-210ENST00000474496 RANBP6O60518 1105 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP3-210ENST00000474496 CTNND1O60716 968 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP3-210ENST00000474496 TSPY3P0CV98 308 aa12.61□□□□□ -0.39
TRAF3IP3-210ENST00000474496 TSPY8P0CW00 308 aa12.61□□□□□ -0.39
TRAF3IP3-210ENST00000474496 INPP5BP32019 993 aa12.61□□□□□ -0.39
TRAF3IP3-210ENST00000474496 VGLL4Q14135 290 aa12.61□□□□□ -0.39
TRAF3IP3-210ENST00000474496 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
TRAF3IP3-210ENST00000474496 ABCB5Q2M3G0 1257 aa12.61□□□□□ -0.39
TRAF3IP3-210ENST00000474496 C16orf86Q6ZW13 317 aa12.61□□□□□ -0.39
TRAF3IP3-210ENST00000474496 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRAF3IP3-210ENST00000474496 TLL2Q9Y6L7 1015 aa12.61□□□□□ -0.39
TRAF3IP3-210ENST00000474496 TSPY2A6NKD2 308 aa12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 GH2P01242 217 aa12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 ZKSCAN1P17029 563 aaPredicted RBP12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 SHMT1P34896 483 aa12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 MKRN3Q13064 507 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 AKNAD1Q5T1N1 836 aa12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 RALYLQ86SE5 291 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 SAPCD2Q86UD0 394 aa12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 SCYL3Q8IZE3 742 aa12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 DNAJC18Q9H819 358 aa12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 UPF2Q9HAU5 1272 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 ANAPC4Q9UJX5 808 aa12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 TAOK2Q9UL54 1235 aa12.6□□□□□ -0.39
TRAF3IP3-210ENST00000474496 PHF20L1A8MW92 1017 aa12.59□□□□□ -0.39
TRAF3IP3-210ENST00000474496 ASNSP08243 561 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms