RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 DIS3LQ8TF46 1054 aaKnown RBP16.45■□□□□ 0.22
GAPDH-208ENST00000474249 NSUN4Q96CB9 384 aaKnown RBP16.45■□□□□ 0.22
GAPDH-208ENST00000474249 XAGE2Q96GT9 111 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 MEIS3Q99687 375 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 GDF15Q99988 308 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 OSBPL5Q9H0X9 879 aaPredicted RBP16.45■□□□□ 0.22
GAPDH-208ENST00000474249 SMC4Q9NTJ3 1288 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 HMG20BQ9P0W2 317 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 ABCF2Q9UG63 623 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 STAP2Q9UGK3 403 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 UNC80Q8N2C7 3258 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 FAM196BA6NMK8 535 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 BMP8BP34820 402 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 TFCP2Q12800 502 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 SPP2Q13103 211 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 PICALMQ13492 652 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 COA7Q96BR5 231 aa16.45■□□□□ 0.22
GAPDH-208ENST00000474249 LOC285556D6RIA3 1793 aa16.44■□□□□ 0.22
GAPDH-208ENST00000474249 CUL9Q8IWT3 2517 aa16.44■□□□□ 0.22
GAPDH-208ENST00000474249 PLXNB2O15031 1838 aa16.44■□□□□ 0.22
GAPDH-208ENST00000474249 CAP2P40123 477 aa16.44■□□□□ 0.22
GAPDH-208ENST00000474249 ANKLE1Q8NAG6 615 aa16.44■□□□□ 0.22
GAPDH-208ENST00000474249 ZNF280CQ8ND82 737 aa16.44■□□□□ 0.22
GAPDH-208ENST00000474249 LRCH3Q96II8 777 aa16.44■□□□□ 0.22
GAPDH-208ENST00000474249 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■■■□□ 17.1
GAPDH-208ENST00000474249 CT47B1P0C2W7 299 aaPredicted RBP16.43■□□□□ 0.22
GAPDH-208ENST00000474249 GCLCP48506 637 aaPredicted RBP16.43■□□□□ 0.22
GAPDH-208ENST00000474249 JAG1P78504 1218 aa16.43■□□□□ 0.22
GAPDH-208ENST00000474249 TRIM32Q13049 653 aa16.43■□□□□ 0.22
GAPDH-208ENST00000474249 MAP3K21Q5TCX8 1036 aa16.43■□□□□ 0.22
GAPDH-208ENST00000474249 PI16Q6UXB8 463 aa16.43■□□□□ 0.22
GAPDH-208ENST00000474249 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
GAPDH-208ENST00000474249 METTL16Q86W50 562 aaKnown RBP16.43■□□□□ 0.22
GAPDH-208ENST00000474249 TBC1D2Q9BYX2 928 aa16.43■□□□□ 0.22
GAPDH-208ENST00000474249 ASCC2Q9H1I8 757 aaPredicted RBP16.43■□□□□ 0.22
GAPDH-208ENST00000474249 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.43■□□□□ 0.22
GAPDH-208ENST00000474249 MORF4L1Q9UBU8 362 aa16.43■□□□□ 0.22
GAPDH-208ENST00000474249 PNMA3Q9UL41 463 aa16.43■□□□□ 0.22
GAPDH-208ENST00000474249 HDAC5Q9UQL6 1122 aa16.43■□□□□ 0.22
GAPDH-208ENST00000474249 RPTORQ8N122 1335 aa16.42■□□□□ 0.22
GAPDH-208ENST00000474249 ARID4AP29374 1257 aaPredicted RBP16.42■□□□□ 0.22
GAPDH-208ENST00000474249 HMGCS2P54868 508 aa16.42■□□□□ 0.22
GAPDH-208ENST00000474249 MVPQ14764 893 aaKnown RBP16.42■□□□□ 0.22
GAPDH-208ENST00000474249 POTEEQ6S8J3 1075 aa16.42■□□□□ 0.22
GAPDH-208ENST00000474249 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
GAPDH-208ENST00000474249 NECAB2Q7Z6G3 386 aa16.42■□□□□ 0.22
GAPDH-208ENST00000474249 API5Q9BZZ5 524 aaKnown RBP16.42■□□□□ 0.22
GAPDH-208ENST00000474249 AKAP2Q9Y2D5 859 aa16.42■□□□□ 0.22
GAPDH-208ENST00000474249 HMGCRP04035 888 aa16.41■□□□□ 0.22
GAPDH-208ENST00000474249 HOXA7P31268 230 aaPredicted RBP16.41■□□□□ 0.22
GAPDH-208ENST00000474249 GPR153Q6NV75 609 aa16.41■□□□□ 0.22
GAPDH-208ENST00000474249 SPATA5Q8NB90 893 aa16.41■□□□□ 0.22
GAPDH-208ENST00000474249 WDR18Q9BV38 432 aa16.41■□□□□ 0.22
GAPDH-208ENST00000474249 OGDHLQ9ULD0 1010 aa16.41■□□□□ 0.22
GAPDH-208ENST00000474249 SIPA1L1O43166 1804 aa16.4■□□□□ 0.22
GAPDH-208ENST00000474249 USP17L5A8MUK1 530 aa16.4■□□□□ 0.22
GAPDH-208ENST00000474249 SRGAP3O43295 1099 aa16.4■□□□□ 0.22
GAPDH-208ENST00000474249 TRIB2Q92519 343 aa16.4■□□□□ 0.22
GAPDH-208ENST00000474249 ARHGAP45Q92619 1136 aa16.4■□□□□ 0.22
GAPDH-208ENST00000474249 USP6NLQ92738 828 aa16.4■□□□□ 0.22
GAPDH-208ENST00000474249 DNAJC18Q9H819 358 aa16.4■□□□□ 0.22
GAPDH-208ENST00000474249 HERC5Q9UII4 1024 aaKnown RBP16.4■□□□□ 0.22
GAPDH-208ENST00000474249 LDHCP07864 332 aa16.39■□□□□ 0.21
GAPDH-208ENST00000474249 MCAMP43121 646 aa16.39■□□□□ 0.21
GAPDH-208ENST00000474249 RARSP54136 660 aaKnown RBP16.39■□□□□ 0.21
GAPDH-208ENST00000474249 SLC17A8Q8NDX2 589 aa16.39■□□□□ 0.21
GAPDH-208ENST00000474249 TXNRD2Q9NNW7 524 aa16.39■□□□□ 0.21
GAPDH-208ENST00000474249 ATAD5Q96QE3 1844 aa16.38■□□□□ 0.21
GAPDH-208ENST00000474249 PEX10O60683 326 aa16.38■□□□□ 0.21
GAPDH-208ENST00000474249 XRCC5P13010 732 aaKnown RBP16.38■□□□□ 0.21
GAPDH-208ENST00000474249 PPP4CP60510 307 aa16.38■□□□□ 0.21
GAPDH-208ENST00000474249 GSTO1P78417 241 aa16.38■□□□□ 0.21
GAPDH-208ENST00000474249 PABPC4Q13310 644 aaKnown RBP eCLIP16.38■□□□□ 0.211e-323■■■■□ 26.1
GAPDH-208ENST00000474249 LRIT3Q3SXY7 679 aa16.38■□□□□ 0.21
GAPDH-208ENST00000474249 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
GAPDH-208ENST00000474249 P2RX7Q99572 595 aaKnown RBP16.38■□□□□ 0.21
GAPDH-208ENST00000474249 NBPF3Q9H094 633 aa16.38■□□□□ 0.21
GAPDH-208ENST00000474249 HMX1Q9NP08 348 aaPredicted RBP16.38■□□□□ 0.21
GAPDH-208ENST00000474249 RBPJLQ9UBG7 517 aa16.38■□□□□ 0.21
GAPDH-208ENST00000474249 PFASO15067 1338 aa16.37■□□□□ 0.21
GAPDH-208ENST00000474249 VCANP13611 3396 aa16.37■□□□□ 0.21
GAPDH-208ENST00000474249 DLL1O00548 723 aa16.37■□□□□ 0.21
GAPDH-208ENST00000474249 GNAI3P08754 354 aa16.37■□□□□ 0.21
GAPDH-208ENST00000474249 COL6A1P12109 1028 aa16.37■□□□□ 0.21
GAPDH-208ENST00000474249 BACE1P56817 501 aa16.37■□□□□ 0.21
GAPDH-208ENST00000474249 Q3C1V9 767 aa16.37■□□□□ 0.21
GAPDH-208ENST00000474249 NEUROD6Q96NK8 337 aa16.37■□□□□ 0.21
GAPDH-208ENST00000474249 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
GAPDH-208ENST00000474249 TAOK2Q9UL54 1235 aa16.37■□□□□ 0.21
GAPDH-208ENST00000474249 SHROOM1Q2M3G4 852 aaPredicted RBP16.36■□□□□ 0.21
GAPDH-208ENST00000474249 LHX8Q68G74 356 aa16.36■□□□□ 0.21
GAPDH-208ENST00000474249 ADGRA1Q86SQ6 560 aa16.36■□□□□ 0.21
GAPDH-208ENST00000474249 C7orf61Q8IZ16 206 aa16.36■□□□□ 0.21
GAPDH-208ENST00000474249 DHX36Q9H2U1 1008 aaKnown RBP16.36■□□□□ 0.21
GAPDH-208ENST00000474249 C11orf49Q9H6J7 331 aa16.36■□□□□ 0.21
GAPDH-208ENST00000474249 EYSQ5T1H1 3165 aa16.35■□□□□ 0.21
GAPDH-208ENST00000474249 DDX60LQ5H9U9 1706 aaKnown RBP16.35■□□□□ 0.21
GAPDH-208ENST00000474249 PNMA6EA0A0J9YXQ4 647 aa16.35■□□□□ 0.21
GAPDH-208ENST00000474249 MTMR2Q13614 643 aa16.35■□□□□ 0.21
GAPDH-208ENST00000474249 FOXP4Q8IVH2 680 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms