RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 CCDC84Q86UT8 332 aaPredicted RBP21.8■■□□□ 1.08
UPF3A-203ENST00000474056 CD99L2Q8TCZ2 262 aa21.8■■□□□ 1.08
UPF3A-203ENST00000474056 DHX36Q9H2U1 1008 aaKnown RBP21.8■■□□□ 1.08
UPF3A-203ENST00000474056 DCTPP1Q9H773 170 aa21.8■■□□□ 1.08
UPF3A-203ENST00000474056 ZCCHC17Q9NP64 241 aaKnown RBP21.8■■□□□ 1.08
UPF3A-203ENST00000474056 PCDHB15Q9Y5E8 787 aa21.8■■□□□ 1.08
UPF3A-203ENST00000474056 ZHX2Q9Y6X8 837 aa21.8■■□□□ 1.08
UPF3A-203ENST00000474056 ATP5JP18859 108 aa21.79■■□□□ 1.08
UPF3A-203ENST00000474056 CAP1Q01518 475 aa21.79■■□□□ 1.08
UPF3A-203ENST00000474056 RRP1BQ14684 758 aaKnown RBP21.79■■□□□ 1.08
UPF3A-203ENST00000474056 PKN2Q16513 984 aaKnown RBP21.79■■□□□ 1.08
UPF3A-203ENST00000474056 DNAJC18Q9H819 358 aa21.79■■□□□ 1.08
UPF3A-203ENST00000474056 PI4KBQ9UBF8 816 aa21.79■■□□□ 1.08
UPF3A-203ENST00000474056 HERC5Q9UII4 1024 aaKnown RBP21.79■■□□□ 1.08
UPF3A-203ENST00000474056 PALD1Q9ULE6 856 aa21.79■■□□□ 1.08
UPF3A-203ENST00000474056 AFG3L2Q9Y4W6 797 aa21.79■■□□□ 1.08
UPF3A-203ENST00000474056 CXCL11O14625 94 aa21.78■■□□□ 1.08
UPF3A-203ENST00000474056 PDE6AP16499 860 aa21.78■■□□□ 1.08
UPF3A-203ENST00000474056 SP3Q02447 781 aa21.78■■□□□ 1.08
UPF3A-203ENST00000474056 SLC9C2Q5TAH2 1124 aa21.78■■□□□ 1.08
UPF3A-203ENST00000474056 TMED8Q6PL24 325 aaPredicted RBP21.78■■□□□ 1.08
UPF3A-203ENST00000474056 ANKRD23Q86SG2 305 aa21.78■■□□□ 1.08
UPF3A-203ENST00000474056 ERO1AQ96HE7 468 aa21.78■■□□□ 1.08
UPF3A-203ENST00000474056 CRBNQ96SW2 442 aa21.78■■□□□ 1.08
UPF3A-203ENST00000474056 RIOK1Q9BRS2 568 aaKnown RBP21.78■■□□□ 1.08
UPF3A-203ENST00000474056 PAG1Q9NWQ8 432 aa21.78■■□□□ 1.08
UPF3A-203ENST00000474056 SAP30BPQ9UHR5 308 aaKnown RBP21.78■■□□□ 1.08
UPF3A-203ENST00000474056 TRIM17Q9Y577 477 aa21.78■■□□□ 1.08
UPF3A-203ENST00000474056 LOC285556D6RIA3 1793 aa21.78■■□□□ 1.08
UPF3A-203ENST00000474056 BAZ2AQ9UIF9 1905 aaKnown RBP21.77■■□□□ 1.08
UPF3A-203ENST00000474056 A0A0G2JLL6 359 aaPredicted RBP21.77■■□□□ 1.08
UPF3A-203ENST00000474056 USP5P45974 858 aa21.77■■□□□ 1.08
UPF3A-203ENST00000474056 SLC4A8Q2Y0W8 1093 aa21.77■■□□□ 1.08
UPF3A-203ENST00000474056 OTOP1Q7RTM1 612 aa21.77■■□□□ 1.08
UPF3A-203ENST00000474056 PRRT2Q7Z6L0 340 aaPredicted RBP21.77■■□□□ 1.08
UPF3A-203ENST00000474056 CERS3Q8IU89 383 aa21.77■■□□□ 1.08
UPF3A-203ENST00000474056 HPS5Q9UPZ3 1129 aa21.77■■□□□ 1.08
UPF3A-203ENST00000474056 ZNF532Q9HCE3 1301 aa21.77■■□□□ 1.07
UPF3A-203ENST00000474056 TCRBV5S4A2TA0A5A2 114 aa21.76■■□□□ 1.07
UPF3A-203ENST00000474056 PDHXO00330 501 aa21.76■■□□□ 1.07
UPF3A-203ENST00000474056 TLR2O60603 784 aa21.76■■□□□ 1.07
UPF3A-203ENST00000474056 CAP2P40123 477 aa21.76■■□□□ 1.07
UPF3A-203ENST00000474056 FBXO46Q6PJ61 603 aaPredicted RBP21.76■■□□□ 1.07
UPF3A-203ENST00000474056 HAUS7Q99871 368 aa21.76■■□□□ 1.07
UPF3A-203ENST00000474056 MYH8P13535 1937 aa21.76■■□□□ 1.07
UPF3A-203ENST00000474056 MGAMO43451 1857 aa21.75■■□□□ 1.07
UPF3A-203ENST00000474056 TRIM75PA6NK02 468 aa21.75■■□□□ 1.07
UPF3A-203ENST00000474056 GPAT2Q6NUI2 795 aa21.75■■□□□ 1.07
UPF3A-203ENST00000474056 METTL16Q86W50 562 aaKnown RBP21.75■■□□□ 1.07
UPF3A-203ENST00000474056 MAGEB6P1A0A0J9YX57 407 aa21.74■■□□□ 1.07
UPF3A-203ENST00000474056 HLA-DOAP06340 250 aa21.74■■□□□ 1.07
UPF3A-203ENST00000474056 SLFNL1Q499Z3 407 aa21.74■■□□□ 1.07
UPF3A-203ENST00000474056 GADL1Q6ZQY3 521 aa21.74■■□□□ 1.07
UPF3A-203ENST00000474056 FOXP4Q8IVH2 680 aaPredicted RBP21.74■■□□□ 1.07
UPF3A-203ENST00000474056 CRACR2BQ8N4Y2 399 aaPredicted RBP21.74■■□□□ 1.07
UPF3A-203ENST00000474056 EFCC1Q9HA90 598 aa21.73■■□□□ 1.07
UPF3A-203ENST00000474056 ADGRA2Q96PE1 1338 aa21.73■■□□□ 1.07
UPF3A-203ENST00000474056 CHGBP05060 677 aa21.72■■□□□ 1.07
UPF3A-203ENST00000474056 ADD2P35612 726 aa21.72■■□□□ 1.07
UPF3A-203ENST00000474056 JAG1P78504 1218 aa21.72■■□□□ 1.07
UPF3A-203ENST00000474056 SHROOM1Q2M3G4 852 aaPredicted RBP21.72■■□□□ 1.07
UPF3A-203ENST00000474056 TSHZ3Q63HK5 1081 aa21.72■■□□□ 1.07
UPF3A-203ENST00000474056 FASTKD5Q7L8L6 764 aaKnown RBP21.72■■□□□ 1.07
UPF3A-203ENST00000474056 LCORLQ8N3X6 602 aa21.72■■□□□ 1.07
UPF3A-203ENST00000474056 TRIM34Q9BYJ4 488 aa21.72■■□□□ 1.07
UPF3A-203ENST00000474056 ECHDC1Q9NTX5 307 aa21.72■■□□□ 1.07
UPF3A-203ENST00000474056 CPA4Q9UI42 421 aa21.72■■□□□ 1.07
UPF3A-203ENST00000474056 GDF11O95390 407 aa21.71■■□□□ 1.07
UPF3A-203ENST00000474056 C17orf99Q6UX52 265 aa21.71■■□□□ 1.07
UPF3A-203ENST00000474056 HTTP42858 3142 aa21.71■■□□□ 1.07
UPF3A-203ENST00000474056 USP17L5A8MUK1 530 aa21.7■■□□□ 1.06
UPF3A-203ENST00000474056 CYP2C8P10632 490 aa21.7■■□□□ 1.06
UPF3A-203ENST00000474056 SPP2Q13103 211 aa21.7■■□□□ 1.06
UPF3A-203ENST00000474056 ZNF280CQ8ND82 737 aa21.7■■□□□ 1.06
UPF3A-203ENST00000474056 PARK7Q99497 189 aaKnown RBP21.7■■□□□ 1.06
UPF3A-203ENST00000474056 CRNKL1Q9BZJ0 848 aaKnown RBP21.7■■□□□ 1.06
UPF3A-203ENST00000474056 ARHGAP39Q9C0H5 1083 aa21.7■■□□□ 1.06
UPF3A-203ENST00000474056 PTPN22Q9Y2R2 807 aa21.7■■□□□ 1.06
UPF3A-203ENST00000474056 DOCK3Q8IZD9 2030 aa21.69■■□□□ 1.06
UPF3A-203ENST00000474056 SOX10P56693 466 aa21.69■■□□□ 1.06
UPF3A-203ENST00000474056 LACTBP83111 547 aaPredicted RBP21.69■■□□□ 1.06
UPF3A-203ENST00000474056 SDR42E1Q8WUS8 393 aa21.69■■□□□ 1.06
UPF3A-203ENST00000474056 TBC1D2Q9BYX2 928 aa21.69■■□□□ 1.06
UPF3A-203ENST00000474056 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.69■■□□□ 1.06
UPF3A-203ENST00000474056 EHD4Q9H223 541 aa21.69■■□□□ 1.06
UPF3A-203ENST00000474056 ARMT1Q9H993 441 aa21.69■■□□□ 1.06
UPF3A-203ENST00000474056 ECM2O94769 699 aaPredicted RBP21.68■■□□□ 1.06
UPF3A-203ENST00000474056 ASNSP08243 561 aa21.68■■□□□ 1.06
UPF3A-203ENST00000474056 PLCD1P51178 756 aa21.68■■□□□ 1.06
UPF3A-203ENST00000474056 EVX2Q03828 476 aa21.68■■□□□ 1.06
UPF3A-203ENST00000474056 TREML2Q5T2D2 321 aa21.68■■□□□ 1.06
UPF3A-203ENST00000474056 TTC6Q86TZ1 520 aa21.68■■□□□ 1.06
UPF3A-203ENST00000474056 GPATCH3Q96I76 525 aa21.68■■□□□ 1.06
UPF3A-203ENST00000474056 AS3MTQ9HBK9 375 aa21.68■■□□□ 1.06
UPF3A-203ENST00000474056 SERPINB13Q9UIV8 391 aa21.68■■□□□ 1.06
UPF3A-203ENST00000474056 MBD4O95243 580 aa21.67■■□□□ 1.06
UPF3A-203ENST00000474056 RGS19P49795 217 aa21.67■■□□□ 1.06
UPF3A-203ENST00000474056 HMGCS2P54868 508 aa21.67■■□□□ 1.06
UPF3A-203ENST00000474056 UBE3CQ15386 1083 aa21.67■■□□□ 1.06
UPF3A-203ENST00000474056 PROCA1Q8NCQ7 364 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms