RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 TRAPPC11Q7Z392 1133 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 ACRBPQ8NEB7 543 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 DENND2AQ9ULE3 1009 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 CCDC172P0C7W6 258 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 AMPHP49418 695 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 FXR1P51114 621 aaKnown RBP eCLIP5.37□□□□□ -1.55
U2SURP-208ENST00000473835 USP14P54578 494 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 CUL4BQ13620 913 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 GCKRQ14397 625 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 PRPF38AQ8NAV1 312 aaKnown RBP5.37□□□□□ -1.55
U2SURP-208ENST00000473835 SH3GL2Q99962 352 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 ADD3Q9UEY8 706 aaKnown RBP5.37□□□□□ -1.55
U2SURP-208ENST00000473835 HDAC5Q9UQL6 1122 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 TOB1P50616 345 aaPredicted RBP5.37□□□□□ -1.55
U2SURP-208ENST00000473835 WHAMMP3Q1A5X7 153 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 ATG9AQ7Z3C6 839 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 C8orf76Q96K31 380 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 CPDO75976 1380 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 ARFGEF2Q9Y6D5 1785 aa5.37□□□□□ -1.55
U2SURP-208ENST00000473835 GGCXP38435 758 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 MMS19Q96T76 1030 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 CEP83Q9Y592 693 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 ACTN4O43707 911 aaKnown RBP5.36□□□□□ -1.55
U2SURP-208ENST00000473835 C21orf2O43822 256 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 RANBP6O60518 1105 aaKnown RBP5.36□□□□□ -1.55
U2SURP-208ENST00000473835 EIF3JO75822 258 aaKnown RBP5.36□□□□□ -1.55
U2SURP-208ENST00000473835 IRAK1P51617 712 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 DPYDQ12882 1025 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 TUBB2AQ13885 445 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 DNAJC21Q5F1R6 531 aaKnown RBP5.36□□□□□ -1.55
U2SURP-208ENST00000473835 ZNF569Q5MCW4 686 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 TUBB2BQ9BVA1 445 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 NAA15Q9BXJ9 866 aaKnown RBP5.36□□□□□ -1.55
U2SURP-208ENST00000473835 ATXN2Q99700 1313 aaKnown RBP5.36□□□□□ -1.55
U2SURP-208ENST00000473835 NTRK3Q16288 839 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 GRAMD1CQ8IYS0 662 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 AFAP1L1Q8TED9 768 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 COG1Q8WTW3 980 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 A1CFQ9NQ94 594 aaKnown RBP5.36□□□□□ -1.55
U2SURP-208ENST00000473835 A0A087X0B3 334 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 BTBD11A6QL63 1104 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 AKR1B15C9JRZ8 316 aaPredicted RBP5.36□□□□□ -1.55
U2SURP-208ENST00000473835 EIF5P55010 431 aaKnown RBP5.36□□□□□ -1.55
U2SURP-208ENST00000473835 VPS37DQ86XT2 251 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 SENP2Q9HC62 589 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 FAM217BQ9NTX9 383 aaPredicted RBP5.36□□□□□ -1.55
U2SURP-208ENST00000473835 FBXO2Q9UK22 296 aaPredicted RBP5.36□□□□□ -1.55
U2SURP-208ENST00000473835 KCNH3Q9ULD8 1083 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 FAM169AQ9Y6X4 670 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 AENQ8WTP8 325 aaKnown RBP5.36□□□□□ -1.55
U2SURP-208ENST00000473835 OSBP2Q969R2 916 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 ERLIN1O75477 346 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 CASP14P31944 242 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 DDR1Q08345 913 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 RAB11FIP4Q86YS3 637 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 PDILTQ8N807 584 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 CCDC102AQ96A19 550 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 TRIM10Q9UDY6 481 aa5.36□□□□□ -1.55
U2SURP-208ENST00000473835 WDR17Q8IZU2 1322 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 PSMD14O00487 310 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 ITIH6Q6UXX5 1313 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 KCNA6P17658 529 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 LIG3P49916 1009 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 TICAM2Q86XR7 235 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 GSPT2Q8IYD1 628 aaKnown RBP5.35□□□□□ -1.55
U2SURP-208ENST00000473835 SHISA4Q96DD7 197 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 HDAC6Q9UBN7 1215 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 ZMYM6O95789 1325 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 A1BGP04217 495 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 TUBB4BP68371 445 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 SPECC1Q5M775 1068 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 KRT40Q6A162 431 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 GPATCH11Q8N954 259 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 PAGR1Q9BTK6 254 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 CTAGE15A4D2H0 777 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 CTAGE9A4FU28 777 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 PDE2AO00408 941 aaPredicted RBP5.35□□□□□ -1.55
U2SURP-208ENST00000473835 RNMTO43148 476 aaKnown RBP5.35□□□□□ -1.55
U2SURP-208ENST00000473835 ERLIN2O94905 339 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 CTAGE8P0CG41 777 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 GPTP24298 496 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 PLCD1P51178 756 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 POSTNQ15063 836 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 AKAP4Q5JQC9 854 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 CPLX2Q6PUV4 134 aaKnown RBP5.35□□□□□ -1.55
U2SURP-208ENST00000473835 CCDC91Q7Z6B0 441 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 SH3RF1Q7Z6J0 888 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 CTAGE6Q86UF2 777 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 CTAGE4Q8IX94 777 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 MICALL1Q8N3F8 863 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 ANKRD24Q8TF21 1146 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 NAPGQ99747 312 aaPredicted RBP5.35□□□□□ -1.55
U2SURP-208ENST00000473835 PAG1Q9NWQ8 432 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 SUFUQ9UMX1 484 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 WDR19Q8NEZ3 1342 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 KLF18A0A0U1RQI7 1052 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 TARSL2A2RTX5 802 aaKnown RBP5.35□□□□□ -1.55
U2SURP-208ENST00000473835 EIF3HO15372 352 aaKnown RBP eCLIP5.35□□□□□ -1.55
U2SURP-208ENST00000473835 TTMPQ5BVD1 217 aa5.35□□□□□ -1.55
U2SURP-208ENST00000473835 PAPD7Q5XG87 772 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms