RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TMPRSS13Q9BYE2 586 aa3.66□□□□□ -1.82
CALD1-216ENST00000473714 SUGCTQ9HAC7 445 aa3.66□□□□□ -1.82
CALD1-216ENST00000473714 DISP2A7MBM2 1401 aa3.66□□□□□ -1.82
CALD1-216ENST00000473714 KIF27Q86VH2 1401 aa3.66□□□□□ -1.82
CALD1-216ENST00000473714 TIAM1Q13009 1591 aa3.66□□□□□ -1.82
CALD1-216ENST00000473714 MYO5CQ9NQX4 1742 aa3.65□□□□□ -1.82
CALD1-216ENST00000473714 USP17L15C9J2P7 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 USP17L10C9JJH3 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 USP17L13C9JLJ4 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 USP17L12C9JPN9 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 USP17L11C9JVI0 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 USP17L21D6R901 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 USP17L18D6R9N7 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 USP17L22D6RA61 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 USP17L17D6RBQ6 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 USP17L19D6RCP7 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 USP17L20D6RJB6 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 TIAF1O95411 115 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 TSPAN15O95858 294 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 DRD2P14416 443 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 FUT4P22083 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 RGS19P49795 217 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 C19orf57Q0VDD7 668 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 USP17L24Q0WX57 530 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 ECM1Q16610 540 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 MLANAQ16655 118 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 SND1Q7KZF4 910 aaKnown RBP eCLIP3.65□□□□□ -1.83
CALD1-216ENST00000473714 ZNF765Q7L2R6 523 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 NCAPG2Q86XI2 1143 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 C1QL4Q86Z23 238 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 PI4K2BQ8TCG2 481 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 ZNF428Q96B54 188 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 MISP3Q96FF7 219 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 CSRNP1Q96S65 589 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 SYT17Q9BSW7 474 aa3.65□□□□□ -1.83
CALD1-216ENST00000473714 BIN2Q9UBW5 565 aaPredicted RBP3.65□□□□□ -1.83
CALD1-216ENST00000473714 KDM5AP29375 1690 aaKnown RBP3.65□□□□□ -1.83
CALD1-216ENST00000473714 MIA2Q96PC5 1412 aa3.64□□□□□ -1.83
CALD1-216ENST00000473714 FOXO3O43524 673 aa3.64□□□□□ -1.83
CALD1-216ENST00000473714 RNASE1P07998 156 aaKnown RBP3.64□□□□□ -1.83
CALD1-216ENST00000473714 WEE1P30291 646 aa3.64□□□□□ -1.83
CALD1-216ENST00000473714 CTSWP56202 376 aa3.64□□□□□ -1.83
CALD1-216ENST00000473714 SRPK2P78362 688 aaKnown RBP3.64□□□□□ -1.83
CALD1-216ENST00000473714 BNIP3Q12983 259 aa3.64□□□□□ -1.83
CALD1-216ENST00000473714 MAP7Q14244 749 aa3.64□□□□□ -1.83
CALD1-216ENST00000473714 EZH2Q15910 746 aaKnown RBP3.64□□□□□ -1.83
CALD1-216ENST00000473714 EXOSC6Q5RKV6 272 aaKnown RBP3.64□□□□□ -1.83
CALD1-216ENST00000473714 KANK4Q5T7N3 995 aaPredicted RBP3.64□□□□□ -1.83
CALD1-216ENST00000473714 CEP120Q8N960 986 aa3.64□□□□□ -1.83
CALD1-216ENST00000473714 EZH1Q92800 747 aaPredicted RBP3.64□□□□□ -1.83
CALD1-216ENST00000473714 GATA6Q92908 595 aa3.64□□□□□ -1.83
CALD1-216ENST00000473714 USP26Q9BXU7 913 aa3.64□□□□□ -1.83
CALD1-216ENST00000473714 BCL11AQ9H165 835 aa3.64□□□□□ -1.83
CALD1-216ENST00000473714 MBNL3Q9NUK0 354 aaKnown RBP3.64□□□□□ -1.83
CALD1-216ENST00000473714 FNDC3AQ9Y2H6 1198 aaKnown RBP3.64□□□□□ -1.83
CALD1-216ENST00000473714 PNPLA6Q8IY17 1366 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 PTCH1Q13635 1447 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 NCOA3Q9Y6Q9 1424 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 NKTRP30414 1462 aaKnown RBP3.63□□□□□ -1.83
CALD1-216ENST00000473714 NUP153P49790 1475 aaKnown RBP3.63□□□□□ -1.83
CALD1-216ENST00000473714 CAMSAP2Q08AD1 1489 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 TMEM88BA6NKF7 163 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 KIF4AO95239 1232 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 ELOAQ14241 798 aaKnown RBP3.63□□□□□ -1.83
CALD1-216ENST00000473714 NBPF8Q3BBV2 869 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 TMEM164Q5U3C3 297 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 GGT6Q6P531 493 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 BRINP3Q76B58 766 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 KRT27Q7Z3Y8 459 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 ANKMY2Q8IV38 441 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 ETFBKMTQ8IXQ9 262 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 C2CD4AQ8NCU7 369 aaPredicted RBP3.63□□□□□ -1.83
CALD1-216ENST00000473714 LRRN4CLQ8ND94 238 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 STK32AQ8WU08 396 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 PIK3R5Q8WYR1 880 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 CAMKK2Q96RR4 588 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 FAM13BQ9NYF5 915 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 KIAA1210Q9ULL0 1709 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 PITPNM2Q9BZ72 1349 aa3.63□□□□□ -1.83
CALD1-216ENST00000473714 A2MP01023 1474 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 LOC100289279A0A1B0GTE1 492 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 FAM196BA6NMK8 535 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 ABL1P00519 1130 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 NFICP08651 508 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 CD8BP10966 210 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 LTKP29376 864 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 SOX4Q06945 474 aaPredicted RBP3.62□□□□□ -1.83
CALD1-216ENST00000473714 FKBP5Q13451 457 aaPredicted RBP3.62□□□□□ -1.83
CALD1-216ENST00000473714 COX20Q5RI15 118 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 DBX2Q6ZNG2 339 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 SYDE1Q6ZW31 735 aaPredicted RBP3.62□□□□□ -1.83
CALD1-216ENST00000473714 TXNDC2Q86VQ3 553 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 ZSWIM9Q86XI8 627 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 WFDC3Q8IUB2 231 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.62□□□□□ -1.83
CALD1-216ENST00000473714 AMOTL2Q9Y2J4 779 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.62□□□□□ -1.83
CALD1-216ENST00000473714 MAST1Q9Y2H9 1570 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 MROH1Q8NDA8 1641 aa3.62□□□□□ -1.83
CALD1-216ENST00000473714 PARD3Q8TEW0 1356 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms