RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 AIDAQ96BJ3 306 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 ACSBG1Q96GR2 724 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 CHAMP1Q96JM3 812 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 TMEM87BQ96K49 555 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 NACAP1Q9BZK3 213 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 NYXQ9GZU5 481 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 NUP62CLQ9H1M0 184 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 CNNM2Q9H8M5 875 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 NAP1L2Q9ULW6 460 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-205ENST00000472806 CNTNAP4Q9C0A0 1308 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 CPLX1O14810 134 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 CTAGE5O15320 804 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 JAK2O60674 1132 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 IGSF3O75054 1194 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 NTSR2O95665 410 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 APPP05067 770 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 PDE6AP16499 860 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 RPIAP49247 311 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 SCARF1Q14162 830 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 RC3H1Q5TC82 1133 aaKnown RBP8.92□□□□□ -0.98
CCDC171-205ENST00000472806 TTC6Q86TZ1 520 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 FERMT3Q86UX7 667 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 MB21D2Q8IYB1 491 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-205ENST00000472806 LEO1Q8WVC0 666 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-205ENST00000472806 MTA3Q9BTC8 594 aa8.92□□□□□ -0.98
CCDC171-205ENST00000472806 PUS7LQ9H0K6 701 aaKnown RBP8.92□□□□□ -0.98
CCDC171-205ENST00000472806 LAMA4Q16363 1823 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 BCORQ6W2J9 1755 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 ZNF532Q9HCE3 1301 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 SALL1Q9NSC2 1324 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 PATL2C9JE40 543 aaKnown RBP8.91□□□□□ -0.98
CCDC171-205ENST00000472806 CHGBP05060 677 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 PTMAP06454 111 aaKnown RBP8.91□□□□□ -0.98
CCDC171-205ENST00000472806 TPM3P06753 285 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 HCLS1P14317 486 aaPredicted RBP8.91□□□□□ -0.98
CCDC171-205ENST00000472806 HMGB2P26583 209 aaKnown RBP8.91□□□□□ -0.98
CCDC171-205ENST00000472806 PHKA1P46020 1223 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 SYNE3Q6ZMZ3 975 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 GPIHBP1Q8IV16 184 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 ANKRD18AQ8IVF6 992 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 SYNE4Q8N205 404 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 BICD2Q8TD16 824 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 DDX11Q96FC9 970 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 LRRC2Q9BYS8 371 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 KRT23Q9C075 422 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 NAPBQ9H115 298 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 TNMDQ9H2S6 317 aa8.91□□□□□ -0.98
CCDC171-205ENST00000472806 RNF41Q9H4P4 317 aaPredicted RBP8.91□□□□□ -0.98
CCDC171-205ENST00000472806 RRAGDQ9NQL2 400 aaPredicted RBP8.91□□□□□ -0.98
CCDC171-205ENST00000472806 PIH1D3Q9NQM4 214 aaKnown RBP8.91□□□□□ -0.98
CCDC171-205ENST00000472806 PNPLA7Q6ZV29 1317 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 KLF18A0A0U1RQI7 1052 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 GOLGA8BA8MQT2 603 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 GOLGA6L6A8MZA4 724 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 GTF2E1P29083 439 aaPredicted RBP8.9□□□□□ -0.98
CCDC171-205ENST00000472806 CCT2P78371 535 aaKnown RBP8.9□□□□□ -0.98
CCDC171-205ENST00000472806 ITPK1Q13572 414 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 UBE4AQ14139 1066 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 SART3Q15020 963 aaKnown RBP8.9□□□□□ -0.98
CCDC171-205ENST00000472806 SF3B3Q15393 1217 aaKnown RBP8.9□□□□□ -0.98
CCDC171-205ENST00000472806 CAVIN4Q5BKX8 364 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 LCE2AQ5TA79 106 aaPredicted RBP8.9□□□□□ -0.98
CCDC171-205ENST00000472806 TTLL5Q6EMB2 1281 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 SASS6Q6UVJ0 657 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 CCDC73Q6ZRK6 1079 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 BRAPQ7Z569 592 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 TMTC2Q8N394 836 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 RNF214Q8ND24 703 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 WASF1Q92558 559 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 C8orf76Q96K31 380 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 STRBPQ96SI9 672 aaKnown RBP8.9□□□□□ -0.98
CCDC171-205ENST00000472806 CLSTN2Q9H4D0 955 aa8.9□□□□□ -0.98
CCDC171-205ENST00000472806 NOL7Q9UMY1 257 aaKnown RBP8.9□□□□□ -0.98
CCDC171-205ENST00000472806 ANGEL1Q9UNK9 670 aaKnown RBP8.9□□□□□ -0.98
CCDC171-205ENST00000472806 COL5A3P25940 1745 aaPredicted RBP8.9□□□□□ -0.98
CCDC171-205ENST00000472806 KAT6BQ8WYB5 2073 aa8.9□□□□□ -0.99
CCDC171-205ENST00000472806 TCHHQ07283 1943 aa8.9□□□□□ -0.99
CCDC171-205ENST00000472806 AKAP11Q9UKA4 1901 aa8.9□□□□□ -0.99
CCDC171-205ENST00000472806 DDX60Q8IY21 1712 aaKnown RBP8.89□□□□□ -0.99
CCDC171-205ENST00000472806 TCRBV5S4A2TA0A5A2 114 aa8.89□□□□□ -0.99
CCDC171-205ENST00000472806 ERICH2A1L162 156 aa8.89□□□□□ -0.99
CCDC171-205ENST00000472806 RCAN1P53805 252 aa8.89□□□□□ -0.99
CCDC171-205ENST00000472806 HAND2P61296 217 aa8.89□□□□□ -0.99
CCDC171-205ENST00000472806 SLFNL1Q499Z3 407 aa8.89□□□□□ -0.99
CCDC171-205ENST00000472806 SLC10A5Q5PT55 438 aa8.89□□□□□ -0.99
CCDC171-205ENST00000472806 NGLY1Q96IV0 654 aa8.89□□□□□ -0.99
CCDC171-205ENST00000472806 ANKRD2Q9GZV1 360 aa8.89□□□□□ -0.99
CCDC171-205ENST00000472806 GMPR2Q9P2T1 348 aaKnown RBP8.89□□□□□ -0.99
CCDC171-205ENST00000472806 RCOR1Q9UKL0 485 aa8.89□□□□□ -0.99
CCDC171-205ENST00000472806 DENND2AQ9ULE3 1009 aa8.89□□□□□ -0.99
CCDC171-205ENST00000472806 PDS5AQ29RF7 1337 aaKnown RBP8.88□□□□□ -0.99
CCDC171-205ENST00000472806 SPATA31A6Q5VVP1 1343 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 CCDC196A0A1B0GTZ2 297 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 FAM177BA6PVY3 158 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 SH2B2O14492 632 aaPredicted RBP8.88□□□□□ -0.99
CCDC171-205ENST00000472806 KDM4AO75164 1064 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 CTDNEP1O95476 244 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 PCP11498 1178 aaKnown RBP8.88□□□□□ -0.99
CCDC171-205ENST00000472806 LIFRP42702 1097 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 TDO2P48775 406 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms