RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 PTPN18Q99952 460 aa20.76■□□□□ 0.91
PKD1-208ENST00000472577 FOCADQ5VW36 1801 aa20.76■□□□□ 0.91
PKD1-208ENST00000472577 CENPFP49454 3210 aa20.76■□□□□ 0.91
PKD1-208ENST00000472577 RBBP6Q7Z6E9 1792 aaKnown RBP20.75■□□□□ 0.91
PKD1-208ENST00000472577 POTEFA5A3E0 1075 aa20.75■□□□□ 0.91
PKD1-208ENST00000472577 NPM3O75607 178 aaKnown RBP20.75■□□□□ 0.91
PKD1-208ENST00000472577 IREB2P48200 963 aaKnown RBP20.75■□□□□ 0.91
PKD1-208ENST00000472577 LCORLQ8N3X6 602 aa20.75■□□□□ 0.91
PKD1-208ENST00000472577 TGFBRAP1Q8WUH2 860 aa20.75■□□□□ 0.91
PKD1-208ENST00000472577 CNKSR2Q8WXI2 1034 aa20.75■□□□□ 0.91
PKD1-208ENST00000472577 MKI67P46013 3256 aaKnown RBP20.75■□□□□ 0.91
PKD1-208ENST00000472577 TRIM6-TRIM34B2RNG4 842 aa20.74■□□□□ 0.91
PKD1-208ENST00000472577 ZFYP08048 801 aaPredicted RBP20.74■□□□□ 0.91
PKD1-208ENST00000472577 GSPT1P15170 499 aaKnown RBP20.74■□□□□ 0.91
PKD1-208ENST00000472577 TTC22Q5TAA0 569 aa20.74■□□□□ 0.91
PKD1-208ENST00000472577 SH3BP5LQ7L8J4 393 aa20.74■□□□□ 0.91
PKD1-208ENST00000472577 CERS3Q8IU89 383 aa20.74■□□□□ 0.91
PKD1-208ENST00000472577 ANKRD13AQ8IZ07 590 aa20.74■□□□□ 0.91
PKD1-208ENST00000472577 PUS7LQ9H0K6 701 aaKnown RBP20.74■□□□□ 0.91
PKD1-208ENST00000472577 ARMT1Q9H993 441 aa20.74■□□□□ 0.91
PKD1-208ENST00000472577 ELP3Q9H9T3 547 aa20.74■□□□□ 0.91
PKD1-208ENST00000472577 UNCXA6NJT0 531 aa20.73■□□□□ 0.91
PKD1-208ENST00000472577 MBD4O95243 580 aa20.73■□□□□ 0.91
PKD1-208ENST00000472577 MAPKAPK5Q8IW41 473 aa20.73■□□□□ 0.91
PKD1-208ENST00000472577 APPBP2Q92624 585 aa20.73■□□□□ 0.91
PKD1-208ENST00000472577 OSBP2Q969R2 916 aa20.73■□□□□ 0.91
PKD1-208ENST00000472577 RILPL2Q969X0 211 aa20.73■□□□□ 0.91
PKD1-208ENST00000472577 OPTNQ96CV9 577 aa20.73■□□□□ 0.91
PKD1-208ENST00000472577 OSBPL5Q9H0X9 879 aaPredicted RBP20.73■□□□□ 0.91
PKD1-208ENST00000472577 PCDH10Q9P2E7 1040 aa20.73■□□□□ 0.91
PKD1-208ENST00000472577 FLT1P17948 1338 aa20.73■□□□□ 0.91
PKD1-208ENST00000472577 TESPA1A2RU30 521 aaPredicted RBP20.72■□□□□ 0.91
PKD1-208ENST00000472577 DDTLA6NHG4 134 aaPredicted RBP20.72■□□□□ 0.91
PKD1-208ENST00000472577 LRRFIP1Q32MZ4 808 aaKnown RBP20.72■□□□□ 0.91
PKD1-208ENST00000472577 BRCA2P51587 3418 aa20.71■□□□□ 0.91
PKD1-208ENST00000472577 AK9Q5TCS8 1911 aa20.71■□□□□ 0.91
PKD1-208ENST00000472577 ZMYM1Q5SVZ6 1142 aa20.71■□□□□ 0.91
PKD1-208ENST00000472577 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.71■□□□□ 0.91
PKD1-208ENST00000472577 ERO1AQ96HE7 468 aa20.71■□□□□ 0.91
PKD1-208ENST00000472577 MS4A4AQ96JQ5 239 aa20.71■□□□□ 0.91
PKD1-208ENST00000472577 SEC62Q99442 399 aaKnown RBP20.71■□□□□ 0.91
PKD1-208ENST00000472577 PTPN22Q9Y2R2 807 aa20.71■□□□□ 0.91
PKD1-208ENST00000472577 ATRNL1Q5VV63 1379 aa20.71■□□□□ 0.91
PKD1-208ENST00000472577 COL2A1P02458 1487 aaPredicted RBP20.7■□□□□ 0.9
PKD1-208ENST00000472577 ZSWIM8A7E2V4 1837 aa20.7■□□□□ 0.9
PKD1-208ENST00000472577 M0R2C6 588 aa20.7■□□□□ 0.9
PKD1-208ENST00000472577 PRKAB2O43741 272 aa20.7■□□□□ 0.9
PKD1-208ENST00000472577 USP5P45974 858 aa20.7■□□□□ 0.9
PKD1-208ENST00000472577 VGLL4Q14135 290 aa20.7■□□□□ 0.9
PKD1-208ENST00000472577 ZSCAN29Q8IWY8 852 aaPredicted RBP20.7■□□□□ 0.9
PKD1-208ENST00000472577 CRNKL1Q9BZJ0 848 aaKnown RBP20.7■□□□□ 0.9
PKD1-208ENST00000472577 MIGA2Q7L4E1 593 aa20.69■□□□□ 0.9
PKD1-208ENST00000472577 SDR42E1Q8WUS8 393 aa20.69■□□□□ 0.9
PKD1-208ENST00000472577 BRI3BPQ8WY22 251 aa20.69■□□□□ 0.9
PKD1-208ENST00000472577 DDX60LQ5H9U9 1706 aaKnown RBP20.69■□□□□ 0.9
PKD1-208ENST00000472577 SLURP2P0DP57 97 aa20.68■□□□□ 0.9
PKD1-208ENST00000472577 SDSP20132 328 aa20.68■□□□□ 0.9
PKD1-208ENST00000472577 SP3Q02447 781 aa20.68■□□□□ 0.9
PKD1-208ENST00000472577 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.68■□□□□ 0.9
PKD1-208ENST00000472577 STRBPQ96SI9 672 aaKnown RBP20.68■□□□□ 0.9
PKD1-208ENST00000472577 SAP30BPQ9UHR5 308 aaKnown RBP20.68■□□□□ 0.9
PKD1-208ENST00000472577 SIPA1L1O43166 1804 aa20.68■□□□□ 0.9
PKD1-208ENST00000472577 NAV1Q8NEY1 1877 aa20.68■□□□□ 0.9
PKD1-208ENST00000472577 MYH1P12882 1939 aa20.67■□□□□ 0.9
PKD1-208ENST00000472577 GPAA1O43292 621 aa20.67■□□□□ 0.9
PKD1-208ENST00000472577 OTUD7BQ6GQQ9 843 aa20.67■□□□□ 0.9
PKD1-208ENST00000472577 TICAM2Q86XR7 235 aa20.67■□□□□ 0.9
PKD1-208ENST00000472577 ARMC5Q96C12 935 aa20.67■□□□□ 0.9
PKD1-208ENST00000472577 HOOK2Q96ED9 719 aa20.67■□□□□ 0.9
PKD1-208ENST00000472577 FAM227BQ96M60 508 aa20.67■□□□□ 0.9
PKD1-208ENST00000472577 EFCC1Q9HA90 598 aa20.67■□□□□ 0.9
PKD1-208ENST00000472577 PALD1Q9ULE6 856 aa20.67■□□□□ 0.9
PKD1-208ENST00000472577 CCL15-CCL14A0A0B4J2E2 113 aa20.66■□□□□ 0.9
PKD1-208ENST00000472577 A0A0D9SFI3 127 aa20.66■□□□□ 0.9
PKD1-208ENST00000472577 NMIQ13287 307 aaPredicted RBP20.66■□□□□ 0.9
PKD1-208ENST00000472577 CCL15Q16663 113 aa20.66■□□□□ 0.9
PKD1-208ENST00000472577 DCAF15Q66K64 600 aa20.66■□□□□ 0.9
PKD1-208ENST00000472577 FAM43AQ8N2R8 423 aa20.66■□□□□ 0.9
PKD1-208ENST00000472577 OTUD5Q96G74 571 aa20.66■□□□□ 0.9
PKD1-208ENST00000472577 DCP1AQ9NPI6 582 aaPredicted RBP20.66■□□□□ 0.9
PKD1-208ENST00000472577 SLC4A4Q9Y6R1 1079 aa20.66■□□□□ 0.9
PKD1-208ENST00000472577 KIAA0100Q14667 2235 aaKnown RBP20.65■□□□□ 0.9
PKD1-208ENST00000472577 SLC4A8Q2Y0W8 1093 aa20.65■□□□□ 0.9
PKD1-208ENST00000472577 CCDC129Q6ZRS4 1044 aa20.65■□□□□ 0.9
PKD1-208ENST00000472577 ZNF341Q9BYN7 854 aa20.65■□□□□ 0.9
PKD1-208ENST00000472577 DHX36Q9H2U1 1008 aaKnown RBP20.65■□□□□ 0.9
PKD1-208ENST00000472577 FAM196BA6NMK8 535 aa20.64■□□□□ 0.89
PKD1-208ENST00000472577 EN2P19622 333 aaPredicted RBP20.64■□□□□ 0.89
PKD1-208ENST00000472577 MAP3K9P80192 1104 aa20.64■□□□□ 0.89
PKD1-208ENST00000472577 MAP3K10Q02779 954 aa20.64■□□□□ 0.89
PKD1-208ENST00000472577 TAF1CQ15572 869 aaPredicted RBP20.64■□□□□ 0.89
PKD1-208ENST00000472577 HELLSQ9NRZ9 838 aa20.64■□□□□ 0.89
PKD1-208ENST00000472577 ATP8A2Q9NTI2 1148 aa20.64■□□□□ 0.89
PKD1-208ENST00000472577 SNCAIPQ9Y6H5 919 aa20.64■□□□□ 0.89
PKD1-208ENST00000472577 GSG1L2A8MUP6 293 aa20.63■□□□□ 0.89
PKD1-208ENST00000472577 EVX2Q03828 476 aa20.63■□□□□ 0.89
PKD1-208ENST00000472577 MCM9Q9NXL9 1143 aa20.63■□□□□ 0.89
PKD1-208ENST00000472577 PI4KBQ9UBF8 816 aa20.63■□□□□ 0.89
PKD1-208ENST00000472577 BAZ2AQ9UIF9 1905 aaKnown RBP20.63■□□□□ 0.89
PKD1-208ENST00000472577 SPDYE5A6NIY4 337 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms