RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.49□□□□□ -0.41
UBE2F-220ENST00000472479 PPP2R3BQ9Y5P8 575 aa12.49□□□□□ -0.41
UBE2F-220ENST00000472479 DDTLA6NHG4 134 aaPredicted RBP12.48□□□□□ -0.41
UBE2F-220ENST00000472479 SLC27A2O14975 620 aa12.48□□□□□ -0.41
UBE2F-220ENST00000472479 POTEIP0CG38 1075 aa12.48□□□□□ -0.41
UBE2F-220ENST00000472479 POTEJP0CG39 1038 aa12.48□□□□□ -0.41
UBE2F-220ENST00000472479 PLCD1P51178 756 aa12.48□□□□□ -0.41
UBE2F-220ENST00000472479 PRKG1Q13976 671 aa12.48□□□□□ -0.41
UBE2F-220ENST00000472479 DCAF15Q66K64 600 aa12.48□□□□□ -0.41
UBE2F-220ENST00000472479 MIGA2Q7L4E1 593 aa12.48□□□□□ -0.41
UBE2F-220ENST00000472479 DYNLL2Q96FJ2 89 aa12.48□□□□□ -0.41
UBE2F-220ENST00000472479 GLIS2Q9BZE0 524 aaPredicted RBP12.48□□□□□ -0.41
UBE2F-220ENST00000472479 SERPINB13Q9UIV8 391 aa12.48□□□□□ -0.41
UBE2F-220ENST00000472479 ADAMTSL1Q8N6G6 1762 aa12.47□□□□□ -0.41
UBE2F-220ENST00000472479 MPHOSPH10O00566 681 aaKnown RBP12.47□□□□□ -0.41
UBE2F-220ENST00000472479 KRT32Q14532 448 aa12.47□□□□□ -0.41
UBE2F-220ENST00000472479 NECTIN1Q15223 517 aa12.47□□□□□ -0.41
UBE2F-220ENST00000472479 NBPF12Q5TAG4 269 aaPredicted RBP12.47□□□□□ -0.41
UBE2F-220ENST00000472479 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
UBE2F-220ENST00000472479 WDR90Q96KV7 1748 aa12.47□□□□□ -0.41
UBE2F-220ENST00000472479 UTRNP46939 3433 aa12.47□□□□□ -0.41
UBE2F-220ENST00000472479 FOXP2O15409 715 aa12.46□□□□□ -0.41
UBE2F-220ENST00000472479 PPP1R12BO60237 982 aaPredicted RBP12.46□□□□□ -0.41
UBE2F-220ENST00000472479 RANBP6O60518 1105 aaKnown RBP12.46□□□□□ -0.41
UBE2F-220ENST00000472479 PRDM1O75626 825 aa12.46□□□□□ -0.41
UBE2F-220ENST00000472479 CYP21A2P08686 494 aa12.46□□□□□ -0.41
UBE2F-220ENST00000472479 PSMA5P28066 241 aa12.46□□□□□ -0.41
UBE2F-220ENST00000472479 HSPA4P34932 840 aa12.46□□□□□ -0.41
UBE2F-220ENST00000472479 FGD1P98174 961 aa12.46□□□□□ -0.41
UBE2F-220ENST00000472479 AKNAD1Q5T1N1 836 aa12.46□□□□□ -0.41
UBE2F-220ENST00000472479 KRT23Q9C075 422 aa12.46□□□□□ -0.41
UBE2F-220ENST00000472479 SWAP70Q9UH65 585 aa12.46□□□□□ -0.41
UBE2F-220ENST00000472479 MKRN1Q9UHC7 482 aaKnown RBP12.46□□□□□ -0.41
UBE2F-220ENST00000472479 PGAP2Q9UHJ9 254 aa12.46□□□□□ -0.41
UBE2F-220ENST00000472479 ZNF646O15015 1829 aaPredicted RBP12.46□□□□□ -0.41
UBE2F-220ENST00000472479 CNTNAP1P78357 1384 aa12.46□□□□□ -0.41
UBE2F-220ENST00000472479 ZMYM6O95789 1325 aa12.46□□□□□ -0.41
UBE2F-220ENST00000472479 SCN4AP35499 1836 aa12.46□□□□□ -0.42
UBE2F-220ENST00000472479 CDK8P49336 464 aa12.46□□□□□ -0.42
UBE2F-220ENST00000472479 SH3BP5LQ7L8J4 393 aa12.46□□□□□ -0.42
UBE2F-220ENST00000472479 NCOA7Q8NI08 942 aa12.46□□□□□ -0.42
UBE2F-220ENST00000472479 CDCA5Q96FF9 252 aa12.46□□□□□ -0.42
UBE2F-220ENST00000472479 JAKMIP1Q96N16 626 aaKnown RBP12.46□□□□□ -0.42
UBE2F-220ENST00000472479 CNNM2Q9H8M5 875 aa12.46□□□□□ -0.42
UBE2F-220ENST00000472479 CABP5Q9NP86 173 aa12.46□□□□□ -0.42
UBE2F-220ENST00000472479 HERC5Q9UII4 1024 aaKnown RBP12.46□□□□□ -0.42
UBE2F-220ENST00000472479 TSPY2A6NKD2 308 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 FAM196BA6NMK8 535 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 E7EWF7 191 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 TSPY3P0CV98 308 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 TSPY8P0CW00 308 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 CERKLQ49MI3 558 aaPredicted RBP12.45□□□□□ -0.42
UBE2F-220ENST00000472479 DLK2Q6UY11 383 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 SLC44A5Q8NCS7 719 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 SMC1BQ8NDV3 1235 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 ESR2Q92731 530 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 NEK1Q96PY6 1258 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 ZNF341Q9BYN7 854 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 INCENPQ9NQS7 918 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 ANAPC4Q9UJX5 808 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 SNX14Q9Y5W7 946 aa12.45□□□□□ -0.42
UBE2F-220ENST00000472479 ERICH2A1L162 156 aa12.44□□□□□ -0.42
UBE2F-220ENST00000472479 B4E1Z4 1266 aa12.44□□□□□ -0.42
UBE2F-220ENST00000472479 TRAF5O00463 557 aa12.44□□□□□ -0.42
UBE2F-220ENST00000472479 PCP11498 1178 aaKnown RBP12.44□□□□□ -0.42
UBE2F-220ENST00000472479 EVX2Q03828 476 aa12.44□□□□□ -0.42
UBE2F-220ENST00000472479 BLOC1S2Q6QNY1 142 aa12.44□□□□□ -0.42
UBE2F-220ENST00000472479 C16orf86Q6ZW13 317 aa12.44□□□□□ -0.42
UBE2F-220ENST00000472479 ARMC9Q7Z3E5 817 aa12.44□□□□□ -0.42
UBE2F-220ENST00000472479 TBC1D10CQ8IV04 446 aa12.44□□□□□ -0.42
UBE2F-220ENST00000472479 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
UBE2F-220ENST00000472479 RASEFQ8IZ41 740 aa12.44□□□□□ -0.42
UBE2F-220ENST00000472479 ZNF784Q8NCA9 323 aaPredicted RBP12.44□□□□□ -0.42
UBE2F-220ENST00000472479 STAG1Q8WVM7 1258 aa12.44□□□□□ -0.42
UBE2F-220ENST00000472479 EHD4Q9H223 541 aa12.44□□□□□ -0.42
UBE2F-220ENST00000472479 SMIM22K7EJ46 135 aa12.43□□□□□ -0.42
UBE2F-220ENST00000472479 HMGB1P09429 215 aaKnown RBP12.43□□□□□ -0.42
UBE2F-220ENST00000472479 CASTP20810 708 aaKnown RBP12.43□□□□□ -0.42
UBE2F-220ENST00000472479 IREB2P48200 963 aaKnown RBP12.43□□□□□ -0.42
UBE2F-220ENST00000472479 ANAPC15P60006 121 aa12.43□□□□□ -0.42
UBE2F-220ENST00000472479 TFAP4Q01664 338 aa12.43□□□□□ -0.42
UBE2F-220ENST00000472479 ATP2B2Q01814 1243 aa12.43□□□□□ -0.42
UBE2F-220ENST00000472479 C2orf69Q8N8R5 385 aa12.43□□□□□ -0.42
UBE2F-220ENST00000472479 TEPSINQ96N21 525 aa12.43□□□□□ -0.42
UBE2F-220ENST00000472479 ANGEL1Q9UNK9 670 aaKnown RBP12.43□□□□□ -0.42
UBE2F-220ENST00000472479 CYP46A1Q9Y6A2 500 aa12.43□□□□□ -0.42
UBE2F-220ENST00000472479 ATRNL1Q5VV63 1379 aa12.42□□□□□ -0.42
UBE2F-220ENST00000472479 KIF3CO14782 793 aa12.42□□□□□ -0.42
UBE2F-220ENST00000472479 TBC1D12O60347 775 aa12.42□□□□□ -0.42
UBE2F-220ENST00000472479 KDM4AO75164 1064 aa12.42□□□□□ -0.42
UBE2F-220ENST00000472479 TOMM70O94826 608 aa12.42□□□□□ -0.42
UBE2F-220ENST00000472479 CELF2O95319 508 aaKnown RBP12.42□□□□□ -0.42
UBE2F-220ENST00000472479 SLURP2P0DP57 97 aa12.42□□□□□ -0.42
UBE2F-220ENST00000472479 SART3Q15020 963 aaKnown RBP12.42□□□□□ -0.42
UBE2F-220ENST00000472479 ABCB5Q2M3G0 1257 aa12.42□□□□□ -0.42
UBE2F-220ENST00000472479 FAM47AQ5JRC9 791 aa12.42□□□□□ -0.42
UBE2F-220ENST00000472479 IQCA1Q86XH1 822 aa12.42□□□□□ -0.42
UBE2F-220ENST00000472479 CCDC17Q96LX7 622 aa12.42□□□□□ -0.42
UBE2F-220ENST00000472479 WRNIP1Q96S55 665 aa12.42□□□□□ -0.42
UBE2F-220ENST00000472479 UBAC1Q9BSL1 405 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms