RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 GARTP22102 1010 aa11.51□□□□□ -0.57
SGCE-210ENST00000472326 GRK4P32298 578 aa11.5□□□□□ -0.57
SGCE-210ENST00000472326 ETF1P62495 437 aaKnown RBP11.5□□□□□ -0.57
SGCE-210ENST00000472326 RPL6Q02878 288 aaKnown RBP11.5□□□□□ -0.57
SGCE-210ENST00000472326 ZMYM1Q5SVZ6 1142 aa11.5□□□□□ -0.57
SGCE-210ENST00000472326 FBXL19Q6PCT2 694 aa11.5□□□□□ -0.57
SGCE-210ENST00000472326 FBXO27Q8NI29 283 aa11.5□□□□□ -0.57
SGCE-210ENST00000472326 GATAD2BQ8WXI9 593 aa11.5□□□□□ -0.57
SGCE-210ENST00000472326 WNT10AQ9GZT5 417 aa11.5□□□□□ -0.57
SGCE-210ENST00000472326 FBRSQ9HAH7 460 aa11.5□□□□□ -0.57
SGCE-210ENST00000472326 PCDHGB7Q9Y5F8 929 aa11.5□□□□□ -0.57
SGCE-210ENST00000472326 CILPO75339 1184 aa11.49□□□□□ -0.57
SGCE-210ENST00000472326 EIF4A3P38919 411 aaKnown RBP11.49□□□□□ -0.57
SGCE-210ENST00000472326 RBM25P49756 843 aaKnown RBP11.49□□□□□ -0.57
SGCE-210ENST00000472326 ZNF394Q53GI3 561 aa11.49□□□□□ -0.57
SGCE-210ENST00000472326 CDC37L1Q7L3B6 337 aa11.49□□□□□ -0.57
SGCE-210ENST00000472326 CCDC84Q86UT8 332 aaPredicted RBP11.49□□□□□ -0.57
SGCE-210ENST00000472326 SLC51AQ86UW1 340 aa11.49□□□□□ -0.57
SGCE-210ENST00000472326 RNF34Q969K3 372 aa11.49□□□□□ -0.57
SGCE-210ENST00000472326 METTL5Q9NRN9 209 aaKnown RBP11.49□□□□□ -0.57
SGCE-210ENST00000472326 SCAMP3O14828 347 aaKnown RBP11.48□□□□□ -0.57
SGCE-210ENST00000472326 TLR3O15455 904 aaKnown RBP11.48□□□□□ -0.57
SGCE-210ENST00000472326 BPNT1O95861 308 aa11.48□□□□□ -0.57
SGCE-210ENST00000472326 ZNF507Q8TCN5 953 aa11.48□□□□□ -0.57
SGCE-210ENST00000472326 OSBPL1AQ9BXW6 950 aa11.48□□□□□ -0.57
SGCE-210ENST00000472326 ATG3Q9NT62 314 aa11.48□□□□□ -0.57
SGCE-210ENST00000472326 ADAMTS1Q9UHI8 967 aa11.48□□□□□ -0.57
SGCE-210ENST00000472326 CORINQ9Y5Q5 1042 aa11.48□□□□□ -0.57
SGCE-210ENST00000472326 PRR19A6NJB7 356 aa11.47□□□□□ -0.57
SGCE-210ENST00000472326 FAM87AP0C7U9 286 aa11.47□□□□□ -0.57
SGCE-210ENST00000472326 NKG7Q16617 165 aa11.47□□□□□ -0.57
SGCE-210ENST00000472326 C9orf131Q5VYM1 1079 aa11.47□□□□□ -0.57
SGCE-210ENST00000472326 ZNF765Q7L2R6 523 aa11.47□□□□□ -0.57
SGCE-210ENST00000472326 USP48Q86UV5 1035 aa11.47□□□□□ -0.57
SGCE-210ENST00000472326 ZNF296Q8WUU4 475 aaPredicted RBP11.47□□□□□ -0.57
SGCE-210ENST00000472326 PSMG3-AS1Q96PY0 264 aa11.47□□□□□ -0.57
SGCE-210ENST00000472326 RNF112Q9ULX5 631 aa11.47□□□□□ -0.57
SGCE-210ENST00000472326 LEFTY1O75610 366 aa11.46□□□□□ -0.57
SGCE-210ENST00000472326 FAM196AQ6ZSG2 479 aa11.46□□□□□ -0.57
SGCE-210ENST00000472326 GIMAP7Q8NHV1 300 aa11.46□□□□□ -0.57
SGCE-210ENST00000472326 PGRP06401 933 aa11.45□□□□□ -0.58
SGCE-210ENST00000472326 TOP6BLQ8N6T0 577 aa11.45□□□□□ -0.58
SGCE-210ENST00000472326 SUPT16HQ9Y5B9 1047 aaKnown RBP11.45□□□□□ -0.58
SGCE-210ENST00000472326 SLBPQ14493 270 aaKnown RBP eCLIP11.44□□□□□ -0.58
SGCE-210ENST00000472326 DIEXFQ68CQ4 756 aaKnown RBP11.44□□□□□ -0.58
SGCE-210ENST00000472326 OGFOD3Q6PK18 319 aa11.44□□□□□ -0.58
SGCE-210ENST00000472326 ARMCX6Q7L4S7 300 aa11.44□□□□□ -0.58
SGCE-210ENST00000472326 KCNQ5Q9NR82 932 aa11.44□□□□□ -0.58
SGCE-210ENST00000472326 GRIN3BO60391 1043 aa11.43□□□□□ -0.58
SGCE-210ENST00000472326 GREM1O60565 184 aa11.43□□□□□ -0.58
SGCE-210ENST00000472326 HOXA10P31260 410 aaPredicted RBP11.43□□□□□ -0.58
SGCE-210ENST00000472326 SSTR4P31391 388 aa11.43□□□□□ -0.58
SGCE-210ENST00000472326 CRKP46108 304 aa11.43□□□□□ -0.58
SGCE-210ENST00000472326 HDLBPQ00341 1268 aaKnown RBP11.43□□□□□ -0.58
SGCE-210ENST00000472326 MPP2Q14168 576 aa11.43□□□□□ -0.58
SGCE-210ENST00000472326 METTL16Q86W50 562 aaKnown RBP11.43□□□□□ -0.58
SGCE-210ENST00000472326 HID1Q8IV36 788 aa11.43□□□□□ -0.58
SGCE-210ENST00000472326 KCT2Q8NC54 265 aa11.43□□□□□ -0.58
SGCE-210ENST00000472326 DUSP23Q9BVJ7 150 aa11.43□□□□□ -0.58
SGCE-210ENST00000472326 UBP1Q9NZI7 540 aa11.43□□□□□ -0.58
SGCE-210ENST00000472326 PIM2Q9P1W9 311 aa11.43□□□□□ -0.58
SGCE-210ENST00000472326 LEMD3Q9Y2U8 911 aa11.43□□□□□ -0.58
SGCE-210ENST00000472326 POLR3KQ9Y2Y1 108 aaPredicted RBP11.43□□□□□ -0.58
SGCE-210ENST00000472326 RACK1P63244 317 aaKnown RBP11.42□□□□□ -0.58
SGCE-210ENST00000472326 DUSP27Q5VZP5 1158 aa11.42□□□□□ -0.58
SGCE-210ENST00000472326 REC114Q7Z4M0 266 aa11.42□□□□□ -0.58
SGCE-210ENST00000472326 SPON2Q9BUD6 331 aa11.42□□□□□ -0.58
SGCE-210ENST00000472326 METTL22Q9BUU2 404 aaPredicted RBP11.42□□□□□ -0.58
SGCE-210ENST00000472326 LRRC4CQ9HCJ2 640 aa11.42□□□□□ -0.58
SGCE-210ENST00000472326 TJP2Q9UDY2 1190 aa11.42□□□□□ -0.58
SGCE-210ENST00000472326 SCO2A0A1W2PP80 73 aa11.41□□□□□ -0.58
SGCE-210ENST00000472326 MED26O95402 600 aa11.41□□□□□ -0.58
SGCE-210ENST00000472326 PLCG1P19174 1290 aa11.41□□□□□ -0.58
SGCE-210ENST00000472326 PDE4BQ07343 736 aa11.41□□□□□ -0.58
SGCE-210ENST00000472326 XAGE3Q8WTP9 111 aa11.41□□□□□ -0.58
SGCE-210ENST00000472326 DPH2Q9BQC3 489 aaPredicted RBP11.41□□□□□ -0.58
SGCE-210ENST00000472326 TACC3Q9Y6A5 838 aa11.41□□□□□ -0.58
SGCE-210ENST00000472326 LRIG2O94898 1065 aa11.4□□□□□ -0.58
SGCE-210ENST00000472326 CYP27A1Q02318 531 aa11.4□□□□□ -0.58
SGCE-210ENST00000472326 NT5DC4Q86YG4 428 aa11.4□□□□□ -0.58
SGCE-210ENST00000472326 KIAA0825Q8IV33 1275 aa11.4□□□□□ -0.58
SGCE-210ENST00000472326 PRDM10Q9NQV6 1147 aa11.4□□□□□ -0.58
SGCE-210ENST00000472326 PRAMEF13Q5VWM6 474 aa11.39□□□□□ -0.59
SGCE-210ENST00000472326 ACSF2Q96CM8 615 aaPredicted RBP11.39□□□□□ -0.59
SGCE-210ENST00000472326 EAF1Q96JC9 268 aaPredicted RBP11.39□□□□□ -0.59
SGCE-210ENST00000472326 BRMS1Q9HCU9 246 aa11.39□□□□□ -0.59
SGCE-210ENST00000472326 DDX41Q9UJV9 622 aaKnown RBP11.39□□□□□ -0.59
SGCE-210ENST00000472326 CYP26A1O43174 497 aa11.38□□□□□ -0.59
SGCE-210ENST00000472326 APOBRQ0VD83 1088 aa11.38□□□□□ -0.59
SGCE-210ENST00000472326 CWF19L2Q2TBE0 894 aaKnown RBP11.38□□□□□ -0.59
SGCE-210ENST00000472326 CYP27C1Q4G0S4 372 aa11.38□□□□□ -0.59
SGCE-210ENST00000472326 SEZ6Q53EL9 994 aa11.38□□□□□ -0.59
SGCE-210ENST00000472326 FOXQ1Q9C009 403 aa11.38□□□□□ -0.59
SGCE-210ENST00000472326 COBLO75128 1261 aa11.37□□□□□ -0.59
SGCE-210ENST00000472326 FOSL1P15407 271 aa11.37□□□□□ -0.59
SGCE-210ENST00000472326 FAM181AQ8N9Y4 354 aa11.37□□□□□ -0.59
SGCE-210ENST00000472326 TMEM87BQ96K49 555 aa11.37□□□□□ -0.59
SGCE-210ENST00000472326 MIPEPQ99797 713 aa11.37□□□□□ -0.59
SGCE-210ENST00000472326 LRRC3Q9BY71 257 aa11.37□□□□□ -0.59
SGCE-210ENST00000472326 REV1Q9UBZ9 1251 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms